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Is there currently a way to plot 3D data? #708

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Marius1311 opened this issue Sep 10, 2024 · 0 comments
Open

Is there currently a way to plot 3D data? #708

Marius1311 opened this issue Sep 10, 2024 · 0 comments

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@Marius1311
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I'm looking for even just the simplest case, i.e. fixing a z-location and visualizing x, y coordinates in 2D. I tried naively with spatialdata-plot, i.e. just

sdata.pl.render_images("image", channel="DAPI").pl.show(), but that fails with TypeError: Invalid shape (7, 9512, 9788) for image data.
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@Marius1311