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Hi, There maybe several coordinate systems in a spatialdata object, each has some elements. For example:
global: morphology_focus (Images), cell_labels (Labels), nucleus_labels (Labels), transcripts (Points), cell_boundaries (Shapes), cell_circles (Shapes), nucleus_boundaries (Shapes)
my_other_space: my_cell_lables, my_transcipts2, my_circles2
we can only get the names of coordinate systems by sdata.coordinate_systems, is there a way to get elements names of each coordinate_systems ?
sdata.coordinate_systems
The text was updated successfully, but these errors were encountered:
Hi, we don't have such a function, but it's very quick to write that code. For instance you can find it here:
spatialdata/src/spatialdata/_core/spatialdata.py
Line 642 in d463376
Line 1868 in d463376
We could turn this into one API at some point, but I'd suggest to use one of the implementation above for now.
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Hi,
There maybe several coordinate systems in a spatialdata object, each has some elements. For example:
global: morphology_focus (Images), cell_labels (Labels), nucleus_labels (Labels), transcripts (Points), cell_boundaries (Shapes), cell_circles (Shapes), nucleus_boundaries (Shapes)
my_other_space: my_cell_lables, my_transcipts2, my_circles2
we can only get the names of coordinate systems by
sdata.coordinate_systems
, is there a way to get elements names of each coordinate_systems ?The text was updated successfully, but these errors were encountered: