diff --git a/packages/PILOT/meta.yaml b/packages/PILOT/meta.yaml new file mode 100644 index 0000000..0fd3287 --- /dev/null +++ b/packages/PILOT/meta.yaml @@ -0,0 +1,50 @@ +name: PILOT +description: | + PILOT is a Python library for Detection of PatIent-Level distances from single cell genomics and pathomics data with Optimal Transport. +project_home: https://github.com/CostaLab/PILOT +documentation_home: https://pilot.readthedocs.io/en/latest/api.html +tutorials_home: https://pilot.readthedocs.io/en/latest/ +publications: + - 10.1038/s44320-023-00003-8 +install: + conda_instructions: | + # Create a new conda environment with the required Python version and R base + conda create --name PILOT python=3.11.5 r-base + # Activate the new environment + conda activate PILOT + # Install the PILOT package from PyPI + pip install pilotpy + pypi: pilotpy +tags: + - multi-omics + - single-cell + - trajectory + - pathomics-data + - ot + - patient-level +license: MIT +version: v2.0.6 +authors: + - Mehdi Joodaki + - Mina Shaigan + - Victor Parra + - Roman D. Bülow + - Christoph Kuppe + - David L. Hölscher + - Mingbo Cheng + - James S. Nagai + - Michaël Goedertier + - Nassim Bouteldja + - Vladimir Tesar + - Jonathan Barratt + - Ian S.D. Roberts + - Rosanna Coppo + - Rafael Kramann + - Peter Boor + - Ivan G. Costa +test_command: | + conda create --name PILOT python=3.11.5 r-base + conda activate PILOT + pip install pilotpy + conda install pytest + cd test && pytest test_pilot.py