diff --git a/modules/nf-scil/registration/synthregistration/main.nf b/modules/nf-scil/registration/synthregistration/main.nf index fb3b8593..3e168eba 100644 --- a/modules/nf-scil/registration/synthregistration/main.nf +++ b/modules/nf-scil/registration/synthregistration/main.nf @@ -2,7 +2,7 @@ process REGISTRATION_SYNTHREGISTRATION { tag "$meta.id" label 'process_single' - container "freesurfer/synthmorph:2" + container "freesurfer/synthmorph:3" containerOptions "--entrypoint ''" input: diff --git a/modules/nf-scil/registration/synthregistration/tests/main.nf.test b/modules/nf-scil/registration/synthregistration/tests/main.nf.test index aecf6ee7..fa8f9945 100644 --- a/modules/nf-scil/registration/synthregistration/tests/main.nf.test +++ b/modules/nf-scil/registration/synthregistration/tests/main.nf.test @@ -42,8 +42,8 @@ nextflow_process { assertAll( { assert process.success }, { assert snapshot( - Nifti_md5sum(process.out.warped_image.get(0).get(1)), - Nifti_md5sum(process.out.deform_transform.get(0).get(1)), + niftiMD5SUM(process.out.warped_image.get(0).get(1)), + niftiMD5SUM(process.out.deform_transform.get(0).get(1)), file(process.out.init_transform.get(0).get(1)), process.out.versions ).match() } diff --git a/modules/nf-scil/registration/synthregistration/tests/main.nf.test.snap b/modules/nf-scil/registration/synthregistration/tests/main.nf.test.snap index b1a2fb83..2a496d24 100644 --- a/modules/nf-scil/registration/synthregistration/tests/main.nf.test.snap +++ b/modules/nf-scil/registration/synthregistration/tests/main.nf.test.snap @@ -1,8 +1,8 @@ { "registration - synthregistration": { "content": [ - "test__output_warped.nii.gz:md5,b8f38768bc1e0860593f3282c41f1551", - "test__deform_warp.nii.gz:md5,a7b8ffcf75af954087b4993717db90c0", + "test__output_warped.nii.gz:md5:header,7194a6bc4e939bcdcde2eb49dfe86e99,data,bec9bc1da19ef79e3a2b2139605194d1", + "test__deform_warp.nii.gz:md5:header,1c5ab0add89b78f9676438b03a401d7b,data,080fe63c2e7711cb1c1db61523ec4a19", "test__init_warp.lta:md5,8759b302c2609351b3467ef4ceaac0af", [ "versions.yml:md5,49fb9c85da9f696926d1ab46ef0968fb" @@ -12,6 +12,6 @@ "nf-test": "0.9.0-rc1", "nextflow": "24.04.4" }, - "timestamp": "2024-08-15T17:53:02.358738" + "timestamp": "2024-09-07T18:29:01.73367" } } \ No newline at end of file