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DefaultBufferedStreamHandle.java
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/*
* #%L
* SciJava Common shared library for SciJava software.
* %%
* Copyright (C) 2009 - 2017 Board of Regents of the University of
* Wisconsin-Madison, Broad Institute of MIT and Harvard, and Max Planck
* Institute of Molecular Cell Biology and Genetics.
* %%
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
*
* 1. Redistributions of source code must retain the above copyright notice,
* this list of conditions and the following disclaimer.
* 2. Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
* ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
* LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
* CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
* SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
* INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
* CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
* ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
* POSSIBILITY OF SUCH DAMAGE.
* #L%
*/
package org.scijava.io.handle;
import java.io.IOException;
import java.io.InputStream;
import java.io.OutputStream;
import org.scijava.io.ByteArrayByteBank;
import org.scijava.io.ByteBank;
import org.scijava.io.location.Location;
/**
* A {@link BufferedStreamHandle} backed by a {@link ByteBank}.
*
* @author Gabriel Einsdorf
*/
public class DefaultBufferedStreamHandle<L extends Location> extends
AbstractStreamHandle<L> implements BufferedStreamHandle<L>
{
private static final int CHUNK_SIZE = 8192;
private final StreamHandle<L> handle;
private ByteBank buffer;
private InputStream inStreamProxy;
private OutputStream outStreamProxy;
private boolean closed;
/**
* Wraps around StreamHandle in a buffer
*
* @param handle
*/
public DefaultBufferedStreamHandle(final StreamHandle<L> handle) {
this.handle = handle;
}
@Override
public byte readByte() throws IOException {
// reached end of the buffer
if (offset() == handle.length()) {
return -1;
}
// check if we need to refill the buffer
if (offset() > maxBuf() || maxBuf() == -1) {
// buffer more bytes
final int filled = fill();
if (filled <= 0) {
// no more bytes in input handle
return -1;
}
}
byte b = getBufferIfOpen().getByte(offset());
advance(1);
return b;
}
@Override
public void seek(final long pos) throws IOException {
final long off = offset();
if (off == pos) return;
if (pos > off) {
// ensure target is buffered
while (pos > maxBuf()) {
fill();
}
}
// values in the range (pos < off) are already buffered
setOffset(pos);
}
private long maxBuf() throws IOException {
return getBufferIfOpen().size() - 1;
}
@Override
public long skip(final long n) throws IOException {
seek(offset() + n);
return handle().skip(n);
}
@Override
public int read(final byte[] b, final int off, final int len)
throws IOException
{
while (maxBuf() < offset() + len) {
final int filled = fill();
if (filled <= 0) {
// no more bytes available
break;
}
}
// read all available bytes
int available = (int) available(len);
getBufferIfOpen().getBytes(offset(), b, off, available);
setOffset(offset() + available);
return available;
}
/**
* Fills the buffer with XX more bytes
*
* @throws IOException
*/
private int fill() throws IOException {
final byte[] buf = new byte[CHUNK_SIZE];
final int read = handle().read(buf);
if (read <= 0) {
return -1;
}
getBufferIfOpen().appendBytes(buf, read);
return read;
}
@Override
public InputStream in() {
if (inStreamProxy == null) {
inStreamProxy = new DataHandleInputStream<>(this);
}
return inStreamProxy;
}
@Override
public OutputStream out() {
if (outStreamProxy == null) {
outStreamProxy = new DataHandleOutputStream<>(this);
}
return outStreamProxy;
}
@Override
public long length() throws IOException {
return handle().length();
}
private StreamHandle<L> handle() throws IOException {
if (closed) {
throw new IOException("Handle is closed!");
}
return handle;
}
@Override
public void setLength(final long length) throws IOException {
handle().setLength(length);
}
@Override
public boolean isReadable() {
return !closed && handle.isReadable();
}
@Override
public boolean isWritable() {
return !closed && handle.isWritable();
}
@Override
public boolean exists() throws IOException {
return handle.exists();
}
@Override
public Class<L> getType() {
return handle.getType();
}
@Override
public void resetStream() throws IOException {
getBufferIfOpen();
if (handle() instanceof ResettableStreamHandle) {
((ResettableStreamHandle<L>) handle()).resetStream();
}
else {
throw new IOException("Handle can not be reset!");
}
}
@Override
public void close() throws IOException {
if (!closed) {
closed = true;
handle().close();
getBufferIfOpen().clear();
buffer = null;
}
}
/**
* @return the buffer used in this handle
* @throws IOException if this handle has been closed
*/
private ByteBank getBufferIfOpen() throws IOException {
if (closed) {
throw new IOException("Handle is closed");
}
if (buffer == null) {
buffer = new ByteArrayByteBank();
}
return buffer;
}
}