diff --git a/src/physics/single_chain/wlc/thermodynamics/test.jl b/src/physics/single_chain/wlc/thermodynamics/test.jl index 9322a032..e754113e 100644 --- a/src/physics/single_chain/wlc/thermodynamics/test.jl +++ b/src/physics/single_chain/wlc/thermodynamics/test.jl @@ -104,7 +104,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::end_to_end_length" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -131,7 +131,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::end_to_end_length_per_link" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -160,7 +160,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::nondimensional_end_to_end_length" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -188,7 +188,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::nondimensional_end_to_end_length_per_link" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -217,7 +217,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::force" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -243,7 +243,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::nondimensional_force" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -270,7 +270,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::helmholtz_free_energy" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -301,7 +301,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::helmholtz_free_energy_per_link" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -333,7 +333,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::relative_helmholtz_free_energy" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -364,7 +364,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::relative_helmholtz_free_energy_per_link" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -401,7 +401,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::nondimensional_helmholtz_free_energy" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -439,7 +439,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::nondimensional_helmholtz_free_energy_per_link" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -476,7 +476,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::nondimensional_relative_helmholtz_free_energy" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -511,7 +511,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::nondimensional_relative_helmholtz_free_energy_per_link" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -544,7 +544,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::gibbs_free_energy" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -573,7 +573,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::gibbs_free_energy_per_link" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -604,7 +604,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::relative_gibbs_free_energy" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -634,7 +634,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::relative_gibbs_free_energy_per_link" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -668,7 +668,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::nondimensional_gibbs_free_energy" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -708,7 +708,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::nondimensional_gibbs_free_energy_per_link" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -747,7 +747,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::nondimensional_relative_gibbs_free_energy" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = @@ -784,7 +784,7 @@ end @testset "physics::single_chain::wlc::thermodynamics::test::thermodynamic_limit::nondimensional_relative_gibbs_free_energy_per_link" begin for _ = 1:parameters.number_of_loops - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = parameters.link_length_reference + parameters.link_length_scale * (0.5 - rand()) hinge_mass = diff --git a/src/physics/single_chain/wlc/thermodynamics/test.py b/src/physics/single_chain/wlc/thermodynamics/test.py index f0471ec4..8ee4d6fa 100644 --- a/src/physics/single_chain/wlc/thermodynamics/test.py +++ b/src/physics/single_chain/wlc/thermodynamics/test.py @@ -154,7 +154,7 @@ def test_end_to_end_length(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -206,7 +206,7 @@ def test_end_to_end_length_per_link(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -260,7 +260,7 @@ def test_nondimensional_end_to_end_length(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -307,7 +307,7 @@ def test_nondimensional_end_to_end_length_per_link(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -353,7 +353,7 @@ def test_force(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -405,7 +405,7 @@ def test_nondimensional_force(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -450,7 +450,7 @@ def test_helmholtz_free_energy(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -514,7 +514,7 @@ def test_helmholtz_free_energy_per_link(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -578,7 +578,7 @@ def test_relative_helmholtz_free_energy(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -635,7 +635,7 @@ def test_relative_helmholtz_free_energy_per_link(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -692,7 +692,7 @@ def test_nondimensional_helmholtz_free_energy(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -755,7 +755,7 @@ def test_nondimensional_helmholtz_free_energy_per_link(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -818,7 +818,7 @@ def test_nondimensional_relative_helmholtz_free_energy(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -871,7 +871,7 @@ def test_nondimensional_relative_helmholtz_free_energy_per_link(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -924,7 +924,7 @@ def test_gibbs_free_energy(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -988,7 +988,7 @@ def test_gibbs_free_energy_per_link(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -1052,7 +1052,7 @@ def test_relative_gibbs_free_energy(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -1109,7 +1109,7 @@ def test_relative_gibbs_free_energy_per_link(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -1166,7 +1166,7 @@ def test_nondimensional_gibbs_free_energy(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -1229,7 +1229,7 @@ def test_nondimensional_gibbs_free_energy_per_link(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -1292,7 +1292,7 @@ def test_nondimensional_relative_gibbs_free_energy(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand()) @@ -1345,7 +1345,7 @@ def test_nondimensional_relative_gibbs_free_energy_per_link(self): """ for _ in range(parameters.number_of_loops): - number_of_links = parameters.number_of_links_minimum + number_of_links = parameters.number_of_links_maximum link_length = \ parameters.link_length_reference + \ parameters.link_length_scale*(0.5 - np.random.rand())