From 72380eda701fceb3f1d0e36b8b709c13c9537b80 Mon Sep 17 00:00:00 2001 From: John Marshall Date: Mon, 19 Aug 2019 13:19:05 +0100 Subject: [PATCH] [SQUASH ME] Retain symbolic allele text in table summary --- VCFv4.3.tex | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/VCFv4.3.tex b/VCFv4.3.tex index 98f3cb187..cc4ffbb73 100644 --- a/VCFv4.3.tex +++ b/VCFv4.3.tex @@ -358,7 +358,7 @@ \subsubsection{Fixed fields} CIGAR & A & String & Cigar string describing how to align an alternate allele to the reference allele \\ DB & 0 & Flag & dbSNP membership \\ DP & 1 & Integer & Combined depth across samples \\ - END & 1 & Integer & End position (variant lies on CHROM at positions POS to END) \\ + END & 1 & Integer & End position on CHROM (used with symbolic alleles; see below) \\ H2 & 0 & Flag & HapMap2 membership \\ H3 & 0 & Flag & HapMap3 membership \\ MQ & 1 & Float & RMS mapping quality \\