From f55a1bae32b0cd03c7d7cee8ad2c927e8fece3aa Mon Sep 17 00:00:00 2001 From: Steffen Albrecht <52280805+salbrec@users.noreply.github.com> Date: Tue, 15 Dec 2020 16:15:05 +0100 Subject: [PATCH] Update README.md --- README.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index ac58645..88ec721 100644 --- a/README.md +++ b/README.md @@ -349,16 +349,16 @@ conda config --add channels bioconda ``` -Now use the yml file `conda_env.yml` to create the conda environment with this call: +Now use the yml file `conda_env.yml` to create the conda environment and activate it. ``` conda env create -f conda_env.yml +conda activate seqQscorer ``` For the installation of the Bioconductor packages we made the experience that the best way is to install them separately within R using the BiocManager. This procedure successfully installed all dependencies in several tests. ``` -conda activate seqQscorer R # Within R run the following lines to install the R packages needed: