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DESCRIPTION
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Package: RISC
Type: Package
Title: Robust Integration of Single-Cell RNA-Seq Datasets
Version: 1.0
Date: 2020-8-28
Authors@R: c(person("Yang", "Liu", role = c("aut", "cre"),
email = "[email protected]"),
person("Deyou", "Zheng", role = "aut"),
person("Tao", "Wang", role = "aut"))
Maintainer: Yang Liu <[email protected]>
Description: The 'RISC' package can integrate single cell RNA sequencing data, correct batch effects, cluster cells, identify gene markers, and produce integrated gene expression matrix. More details in URLs below.
URL: https://www.biorxiv.org/content/10.1101/483297v1.article-info
https://github.com/yangRISC/RISC
Depends: R (>= 3.5)
Imports: Rcpp (>= 0.12.19), Matrix, matrixStats, irlba, doParallel,
foreach, data.table, Rtsne, umap, MASS, parallel, pbmcapply,
densityClust, FNN, igraph, RColorBrewer, ggplot2, gridExtra,
pheatmap, methods, grDevices, stats, utils
LinkingTo: Rcpp, RcppEigen
LazyData: true
Encoding: UTF-8
RoxygenNote: 7.1.1
Suggests: testthat, usethis, knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: yes
License: GPL-3 | file LICENSE
Packaged: 2021-02-28 20:28:46 UTC; yanliu
Author: Yang Liu [aut, cre],
Deyou Zheng [aut],
Tao Wang [aut]