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DESCRIPTION
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Package: secsse
Type: Package
Title: Several Examined and Concealed States-Dependent Speciation and
Extinction
Version: 3.1.0
Date: 2024-04-26
License: GPL (>= 3) | file LICENSE
Authors@R: c(
person(given = "Leonel",
family = "Herrera Alsina",
email = "[email protected]",
role = "aut",
comment = c(ORCID = "0000-0003-0474-3592")),
person(given = "Paul",
family = "van Els",
email = "[email protected]",
role = "aut",
comment = c(ORCID = "0000-0002-9499-8873")),
person(given = "Thijs",
family = "Janzen",
email = "[email protected]",
role = "ctb",
comment = c(ORCID = "0000-0002-4162-1140")),
person(given = "Hanno",
family = "Hildenbrandt",
email = "[email protected]",
role = "ctb",
comment = c(ORCID = "0000-0002-6784-1037")),
person(given = "Pedro",
family = "Santos Neves",
email = "[email protected]",
role = "ctb",
comment = c(ORCID = "0000-0003-2561-4677")),
person(given = "Rampal S.",
family = "Etienne",
email = "[email protected]",
role = c("cre","aut"),
comment = c(ORCID = "0000-0003-2142-7612")))
Description: Simultaneously infers state-dependent diversification across
two or more states of a single or multiple traits while accounting for the
role of a possible concealed trait. See Herrera-Alsina et al. (2019)
<doi:10.1093/sysbio/syy057>.
Depends: R (>= 4.2.0)
Imports:
utils,
DDD (>= 5.0),
ape,
geiger,
Rcpp (>= 1.0.10),
RcppParallel,
ggplot2,
tibble,
rlang,
treestats
Suggests:
diversitree,
phytools,
testthat,
subplex,
knitr,
rmarkdown
LinkingTo:
Rcpp,
RcppParallel,
BH (>= 1.81.0-1)
NeedsCompilation: yes
SystemRequirements: C++17
Encoding: UTF-8
LazyData: true
URL: https://rsetienne.github.io/secsse/,
https://github.com/rsetienne/secsse
BugReports: https://github.com/rsetienne/secsse/issues
VignetteBuilder: knitr
RoxygenNote: 7.2.3
Roxygen: list(markdown = TRUE)