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Finding overlaps with minimap... Killed #324

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jokopebri opened this issue Oct 23, 2023 · 0 comments
Open

Finding overlaps with minimap... Killed #324

jokopebri opened this issue Oct 23, 2023 · 0 comments

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@jokopebri
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Hi All,

I had a problem on using unicycler to assemble nanopore data. The miniasm assembly seemed work, but it stopped when it reached the finding overlap with minimap step (please see the attached log file).

I run the the program using WSL on windows 10. Here is the input: $ unicycler -l merged.fastq.gz -o ucicyler_test -t 4.

Thank you very much.
unicycler.log

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