From 374292d37a361ddd913e3493384fbfef8d1825a8 Mon Sep 17 00:00:00 2001 From: roomrys <38435167+roomrys@users.noreply.github.com> Date: Wed, 2 Oct 2024 14:25:20 -0700 Subject: [PATCH 1/5] F: Pin protobuf <3.20 --- envexp/environment.yml | 2 +- envexp/test_env.py | 2 +- mamba_list.txt | 4 +++- pipdeptree.txt | 2 +- test.log | 10 +++++----- 5 files changed, 11 insertions(+), 9 deletions(-) diff --git a/envexp/environment.yml b/envexp/environment.yml index b1582d3..84c63d2 100644 --- a/envexp/environment.yml +++ b/envexp/environment.yml @@ -5,7 +5,7 @@ dependencies: - python>=3.10.0,<3.11.0 - numpy - h5py - - protobuf + - protobuf <3.20.0 - certifi - importlib-metadata - six diff --git a/envexp/test_env.py b/envexp/test_env.py index 7ef6546..1fbfb8e 100644 --- a/envexp/test_env.py +++ b/envexp/test_env.py @@ -138,5 +138,5 @@ def main(library=None, input_dir=None, commit_message=None): main( # library="qtpy", # input_dir="/Users/liezlmaree/Projects/sleap/sleap", - commit_message="Test", + commit_message="Pin protobuf <3.20", ) diff --git a/mamba_list.txt b/mamba_list.txt index 103cb56..5812c4f 100644 --- a/mamba_list.txt +++ b/mamba_list.txt @@ -34,6 +34,7 @@ libffi 3.4.2 h8ffe710_5 conda-forge libhwloc 2.11.1 default_h8125262_1000 conda-forge libiconv 1.17 hcfcfb64_2 conda-forge liblapack 3.9.0 24_win64_mkl conda-forge +libprotobuf 3.19.6 h12be248_0 conda-forge libsqlite 3.46.1 h2466b09_0 conda-forge libssh2 1.11.0 h7dfc565_0 conda-forge libxml2 2.12.7 h0f24e4e_4 conda-forge @@ -47,7 +48,7 @@ openssl 3.3.2 h2466b09_0 conda-forge opt-einsum 3.4.0 pypi_0 pypi packaging 24.1 pypi_0 pypi pip 24.2 pyh8b19718_1 conda-forge -protobuf 3.19.6 pypi_0 pypi +protobuf 3.19.6 py310h00ffb61_0 conda-forge pthreads-win32 2.9.1 hfa6e2cd_3 conda-forge pyasn1 0.6.1 pypi_0 pypi pyasn1-modules 0.4.1 pypi_0 pypi @@ -80,3 +81,4 @@ wheel 0.44.0 pyhd8ed1ab_0 conda-forge wrapt 1.16.0 pypi_0 pypi xz 5.2.6 h8d14728_0 conda-forge zipp 3.20.2 pyhd8ed1ab_0 conda-forge +zlib 1.3.1 h2466b09_1 conda-forge diff --git a/pipdeptree.txt b/pipdeptree.txt index 3bc9528..5acd9b9 100644 --- a/pipdeptree.txt +++ b/pipdeptree.txt @@ -1,5 +1,5 @@ cached-property @ file:///home/conda/feedstock_root/build_artifacts/cached_property_1615209429212/work --e git+https://github.com/roomrys/envexp@d1f3ce5cc3830377771424cdc1f151b670ef2b7f#egg=experiment&subdirectory=envexp +-e git+https://github.com/roomrys/envexp@afa9e308b179c9be73eb5554413a36ff94d88744#egg=experiment&subdirectory=envexp importlib_metadata @ file:///home/conda/feedstock_root/build_artifacts/importlib-metadata_1726082825846/work zipp @ file:///home/conda/feedstock_root/build_artifacts/zipp_1726248574750/work ipykernel==6.21.2 diff --git a/test.log b/test.log index c728d3a..f8d24f8 100644 --- a/test.log +++ b/test.log @@ -1,16 +1,16 @@ -2024-10-02 14:17:18,524 INFO envexp_utils.log Environment created successfully! -2024-10-02 14:17:24,913 INFO envexp_utils.log Running user-defined test code: +2024-10-02 14:25:01,141 INFO envexp_utils.log Environment created successfully! +2024-10-02 14:25:07,672 INFO envexp_utils.log Running user-defined test code: """User-defined test code to run after the imports have been tested.""" if __name__ == "__main__": import tensorflow -2024-10-02 14:17:27,705 ERROR envexp_utils.log Tests failed! +2024-10-02 14:25:09,918 ERROR envexp_utils.log Tests failed! Traceback (most recent call last): File "d:\envexp\envexp\envexp_utils\log.py", line 123, in run_and_log raise Exception(error) -Exception: 2024-10-02 14:17:26.509325: W tensorflow/stream_executor/platform/default/dso_loader.cc:64] Could not load dynamic library 'cudart64_110.dll'; dlerror: cudart64_110.dll not found -2024-10-02 14:17:26.509360: I tensorflow/stream_executor/cuda/cudart_stub.cc:29] Ignore above cudart dlerror if you do not have a GPU set up on your machine. +Exception: 2024-10-02 14:25:09.342206: W tensorflow/stream_executor/platform/default/dso_loader.cc:64] Could not load dynamic library 'cudart64_110.dll'; dlerror: cudart64_110.dll not found +2024-10-02 14:25:09.342253: I tensorflow/stream_executor/cuda/cudart_stub.cc:29] Ignore above cudart dlerror if you do not have a GPU set up on your machine. A module that was compiled using NumPy 1.x cannot be run in NumPy 2.1.1 as it may crash. To support both 1.x and 2.x From c0f2f718c07a1e90fc35bf8148e898320e771a6f Mon Sep 17 00:00:00 2001 From: roomrys <38435167+roomrys@users.noreply.github.com> Date: Wed, 2 Oct 2024 14:29:43 -0700 Subject: [PATCH 2/5] P: Pin numpy to <2 --- envexp/environment.yml | 2 +- envexp/test_env.py | 2 +- mamba_list.txt | 2 +- pipdeptree.txt | 10 ++-- test.log | 117 +++-------------------------------------- 5 files changed, 16 insertions(+), 117 deletions(-) diff --git a/envexp/environment.yml b/envexp/environment.yml index 84c63d2..0701662 100644 --- a/envexp/environment.yml +++ b/envexp/environment.yml @@ -3,7 +3,7 @@ channels: - conda-forge dependencies: - python>=3.10.0,<3.11.0 - - numpy + - numpy>=1.16.5,<2.0 # tensorflow compiled with numpy 1.x - h5py - protobuf <3.20.0 - certifi diff --git a/envexp/test_env.py b/envexp/test_env.py index 1fbfb8e..64a8b47 100644 --- a/envexp/test_env.py +++ b/envexp/test_env.py @@ -138,5 +138,5 @@ def main(library=None, input_dir=None, commit_message=None): main( # library="qtpy", # input_dir="/Users/liezlmaree/Projects/sleap/sleap", - commit_message="Pin protobuf <3.20", + commit_message="Pin numpy to <2", ) diff --git a/mamba_list.txt b/mamba_list.txt index 5812c4f..b90925c 100644 --- a/mamba_list.txt +++ b/mamba_list.txt @@ -42,7 +42,7 @@ libzlib 1.3.1 h2466b09_1 conda-forge markdown 3.7 pypi_0 pypi markupsafe 2.1.5 pypi_0 pypi mkl 2024.1.0 h66d3029_694 conda-forge -numpy 2.1.1 py310h1ec8c79_0 conda-forge +numpy 1.26.4 py310hf667824_0 conda-forge oauthlib 3.2.2 pypi_0 pypi openssl 3.3.2 h2466b09_0 conda-forge opt-einsum 3.4.0 pypi_0 pypi diff --git a/pipdeptree.txt b/pipdeptree.txt index 5acd9b9..7beb420 100644 --- a/pipdeptree.txt +++ b/pipdeptree.txt @@ -1,5 +1,5 @@ cached-property @ file:///home/conda/feedstock_root/build_artifacts/cached_property_1615209429212/work --e git+https://github.com/roomrys/envexp@afa9e308b179c9be73eb5554413a36ff94d88744#egg=experiment&subdirectory=envexp +-e git+https://github.com/roomrys/envexp@374292d37a361ddd913e3493384fbfef8d1825a8#egg=experiment&subdirectory=envexp importlib_metadata @ file:///home/conda/feedstock_root/build_artifacts/importlib-metadata_1726082825846/work zipp @ file:///home/conda/feedstock_root/build_artifacts/zipp_1726248574750/work ipykernel==6.21.2 @@ -30,13 +30,13 @@ tensorflow==2.9.2 six @ file:///home/conda/feedstock_root/build_artifacts/six_1620240208055/work grpcio==1.66.2 h5py @ file:///D:/bld/h5py_1717664858971/work - numpy @ file:///D:/bld/numpy_1725411924103/work/dist/numpy-2.1.1-cp310-cp310-win_amd64.whl#sha256=07fc83bf2c7860dfae7fe2b4a2b8d0dfae43c4d3600390ff6299be05daeeee86 + numpy @ file:///D:/bld/numpy_1707225570061/work/dist/numpy-1.26.4-cp310-cp310-win_amd64.whl#sha256=6761da75b1528684e6bf4dabdbdded9d1eb4d0e9b299482c7ce152cfb3155106 keras==2.9.0 Keras-Preprocessing==1.1.2 - numpy @ file:///D:/bld/numpy_1725411924103/work/dist/numpy-2.1.1-cp310-cp310-win_amd64.whl#sha256=07fc83bf2c7860dfae7fe2b4a2b8d0dfae43c4d3600390ff6299be05daeeee86 + numpy @ file:///D:/bld/numpy_1707225570061/work/dist/numpy-1.26.4-cp310-cp310-win_amd64.whl#sha256=6761da75b1528684e6bf4dabdbdded9d1eb4d0e9b299482c7ce152cfb3155106 six @ file:///home/conda/feedstock_root/build_artifacts/six_1620240208055/work libclang==18.1.1 - numpy @ file:///D:/bld/numpy_1725411924103/work/dist/numpy-2.1.1-cp310-cp310-win_amd64.whl#sha256=07fc83bf2c7860dfae7fe2b4a2b8d0dfae43c4d3600390ff6299be05daeeee86 + numpy @ file:///D:/bld/numpy_1707225570061/work/dist/numpy-1.26.4-cp310-cp310-win_amd64.whl#sha256=6761da75b1528684e6bf4dabdbdded9d1eb4d0e9b299482c7ce152cfb3155106 opt_einsum==3.4.0 packaging==24.1 protobuf==3.19.6 @@ -66,7 +66,7 @@ tensorflow==2.9.2 urllib3==2.2.3 grpcio==1.66.2 Markdown==3.7 - numpy @ file:///D:/bld/numpy_1725411924103/work/dist/numpy-2.1.1-cp310-cp310-win_amd64.whl#sha256=07fc83bf2c7860dfae7fe2b4a2b8d0dfae43c4d3600390ff6299be05daeeee86 + numpy @ file:///D:/bld/numpy_1707225570061/work/dist/numpy-1.26.4-cp310-cp310-win_amd64.whl#sha256=6761da75b1528684e6bf4dabdbdded9d1eb4d0e9b299482c7ce152cfb3155106 protobuf==3.19.6 requests==2.32.3 certifi @ file:///home/conda/feedstock_root/build_artifacts/certifi_1725278078093/work/certifi diff --git a/test.log b/test.log index f8d24f8..3598451 100644 --- a/test.log +++ b/test.log @@ -1,109 +1,8 @@ -2024-10-02 14:25:01,141 INFO envexp_utils.log Environment created successfully! -2024-10-02 14:25:07,672 INFO envexp_utils.log Running user-defined test code: -"""User-defined test code to run after the imports have been tested.""" - -if __name__ == "__main__": - import tensorflow - -2024-10-02 14:25:09,918 ERROR envexp_utils.log Tests failed! -Traceback (most recent call last): - File "d:\envexp\envexp\envexp_utils\log.py", line 123, in run_and_log - raise Exception(error) -Exception: 2024-10-02 14:25:09.342206: W tensorflow/stream_executor/platform/default/dso_loader.cc:64] Could not load dynamic library 'cudart64_110.dll'; dlerror: cudart64_110.dll not found -2024-10-02 14:25:09.342253: I tensorflow/stream_executor/cuda/cudart_stub.cc:29] Ignore above cudart dlerror if you do not have a GPU set up on your machine. - -A module that was compiled using NumPy 1.x cannot be run in -NumPy 2.1.1 as it may crash. To support both 1.x and 2.x -versions of NumPy, modules must be compiled with NumPy 2.0. -Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. - -If you are a user of the module, the easiest solution will be to -downgrade to 'numpy<2' or try to upgrade the affected module. -We expect that some modules will need time to support NumPy 2. - -Traceback (most recent call last): File "d:\envexp\envexp\user_test_code.py", line 4, in - import tensorflow - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\__init__.py", line 37, in - from tensorflow.python.tools import module_util as _module_util - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\__init__.py", line 37, in - from tensorflow.python.eager import context - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\eager\context.py", line 35, in - from tensorflow.python.client import pywrap_tf_session - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\client\pywrap_tf_session.py", line 19, in - from tensorflow.python.client._pywrap_tf_session import * -AttributeError: _ARRAY_API not found - -A module that was compiled using NumPy 1.x cannot be run in -NumPy 2.1.1 as it may crash. To support both 1.x and 2.x -versions of NumPy, modules must be compiled with NumPy 2.0. -Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. - -If you are a user of the module, the easiest solution will be to -downgrade to 'numpy<2' or try to upgrade the affected module. -We expect that some modules will need time to support NumPy 2. - -Traceback (most recent call last): File "d:\envexp\envexp\user_test_code.py", line 4, in - import tensorflow - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\__init__.py", line 37, in - from tensorflow.python.tools import module_util as _module_util - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\__init__.py", line 42, in - from tensorflow.python import data - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\data\__init__.py", line 21, in - from tensorflow.python.data import experimental - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\data\experimental\__init__.py", line 95, in - from tensorflow.python.data.experimental import service - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\data\experimental\service\__init__.py", line 387, in - from tensorflow.python.data.experimental.ops.data_service_ops import distribute - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\data\experimental\ops\data_service_ops.py", line 22, in - from tensorflow.python.data.experimental.ops import compression_ops - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\data\experimental\ops\compression_ops.py", line 16, in - from tensorflow.python.data.util import structure - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\data\util\structure.py", line 22, in - from tensorflow.python.data.util import nest - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\data\util\nest.py", line 36, in - from tensorflow.python.framework import sparse_tensor as _sparse_tensor - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\framework\sparse_tensor.py", line 24, in - from tensorflow.python.framework import constant_op - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\framework\constant_op.py", line 25, in - from tensorflow.python.eager import execute - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\eager\execute.py", line 23, in - from tensorflow.python.framework import dtypes - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\framework\dtypes.py", line 26, in - from tensorflow.python.lib.core import _pywrap_bfloat16 -AttributeError: _ARRAY_API not found -ImportError: numpy.core._multiarray_umath failed to import -ImportError: numpy.core.umath failed to import -Traceback (most recent call last): - File "d:\envexp\envexp\user_test_code.py", line 4, in - import tensorflow - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\__init__.py", line 37, in - from tensorflow.python.tools import module_util as _module_util - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\__init__.py", line 42, in - from tensorflow.python import data - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\data\__init__.py", line 21, in - from tensorflow.python.data import experimental - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\data\experimental\__init__.py", line 95, in - from tensorflow.python.data.experimental import service - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\data\experimental\service\__init__.py", line 387, in - from tensorflow.python.data.experimental.ops.data_service_ops import distribute - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\data\experimental\ops\data_service_ops.py", line 22, in - from tensorflow.python.data.experimental.ops import compression_ops - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\data\experimental\ops\compression_ops.py", line 16, in - from tensorflow.python.data.util import structure - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\data\util\structure.py", line 22, in - from tensorflow.python.data.util import nest - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\data\util\nest.py", line 36, in - from tensorflow.python.framework import sparse_tensor as _sparse_tensor - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\framework\sparse_tensor.py", line 24, in - from tensorflow.python.framework import constant_op - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\framework\constant_op.py", line 25, in - from tensorflow.python.eager import execute - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\eager\execute.py", line 23, in - from tensorflow.python.framework import dtypes - File "C:\Users\TalmoLab\mambaforge\envs\experiment\lib\site-packages\tensorflow\python\framework\dtypes.py", line 29, in - _np_bfloat16 = _pywrap_bfloat16.TF_bfloat16_type() -TypeError: Unable to convert function return value to a Python type! The signature was - () -> handle - -ERROR conda.cli.main_run:execute(47): `conda run python user_test_code.py` failed. (See above for error) - +2024-10-02 14:29:20,601 INFO envexp_utils.log Environment created successfully! +2024-10-02 14:29:26,860 INFO envexp_utils.log Running user-defined test code: +"""User-defined test code to run after the imports have been tested.""" + +if __name__ == "__main__": + import tensorflow + +2024-10-02 14:29:32,938 INFO envexp_utils.log Tests passed successfully! From adf940d9a0df2e961bd477b24ae7083af1f91d99 Mon Sep 17 00:00:00 2001 From: roomrys <38435167+roomrys@users.noreply.github.com> Date: Wed, 2 Oct 2024 14:35:00 -0700 Subject: [PATCH 3/5] F: Add PySide6 and opencv --- envexp/environment.yml | 2 + envexp/test_env.py | 2 +- mamba_list.txt | 84 ----------------------------------------- pipdeptree.txt | 86 ------------------------------------------ test.log | 13 +++---- 5 files changed, 8 insertions(+), 179 deletions(-) diff --git a/envexp/environment.yml b/envexp/environment.yml index 0701662..b7d3542 100644 --- a/envexp/environment.yml +++ b/envexp/environment.yml @@ -11,6 +11,8 @@ dependencies: - six - typing-extensions - zipp + - PySide6 + - opencv - pip - pip: - tensorflow==2.9.2 diff --git a/envexp/test_env.py b/envexp/test_env.py index 64a8b47..581ebae 100644 --- a/envexp/test_env.py +++ b/envexp/test_env.py @@ -138,5 +138,5 @@ def main(library=None, input_dir=None, commit_message=None): main( # library="qtpy", # input_dir="/Users/liezlmaree/Projects/sleap/sleap", - commit_message="Pin numpy to <2", + commit_message="Add PySide6 and opencv", ) diff --git a/mamba_list.txt b/mamba_list.txt index b90925c..e69de29 100644 --- a/mamba_list.txt +++ b/mamba_list.txt @@ -1,84 +0,0 @@ -# packages in environment at C:\Users\TalmoLab\mambaforge\envs\experiment: -# -# Name Version Build Channel -absl-py 2.1.0 pypi_0 pypi -astunparse 1.6.3 pypi_0 pypi -bzip2 1.0.8 h2466b09_7 conda-forge -ca-certificates 2024.8.30 h56e8100_0 conda-forge -cached-property 1.5.2 hd8ed1ab_1 conda-forge -cached_property 1.5.2 pyha770c72_1 conda-forge -cachetools 5.5.0 pypi_0 pypi -certifi 2024.8.30 pyhd8ed1ab_0 conda-forge -charset-normalizer 3.3.2 pypi_0 pypi -experiment 0.1.0 pypi_0 pypi -flatbuffers 1.12 pypi_0 pypi -gast 0.4.0 pypi_0 pypi -google-auth 2.35.0 pypi_0 pypi -google-auth-oauthlib 0.4.6 pypi_0 pypi -google-pasta 0.2.0 pypi_0 pypi -grpcio 1.66.2 pypi_0 pypi -h5py 3.11.0 nompi_py310h2b0be38_102 conda-forge -hdf5 1.14.3 nompi_h2b43c12_105 conda-forge -idna 3.10 pypi_0 pypi -importlib-metadata 8.5.0 pyha770c72_0 conda-forge -intel-openmp 2024.2.1 h57928b3_1083 conda-forge -keras 2.9.0 pypi_0 pypi -keras-preprocessing 1.1.2 pypi_0 pypi -krb5 1.21.3 hdf4eb48_0 conda-forge -libaec 1.1.3 h63175ca_0 conda-forge -libblas 3.9.0 24_win64_mkl conda-forge -libcblas 3.9.0 24_win64_mkl conda-forge -libclang 18.1.1 pypi_0 pypi -libcurl 8.10.1 h1ee3ff0_0 conda-forge -libffi 3.4.2 h8ffe710_5 conda-forge -libhwloc 2.11.1 default_h8125262_1000 conda-forge -libiconv 1.17 hcfcfb64_2 conda-forge -liblapack 3.9.0 24_win64_mkl conda-forge -libprotobuf 3.19.6 h12be248_0 conda-forge -libsqlite 3.46.1 h2466b09_0 conda-forge -libssh2 1.11.0 h7dfc565_0 conda-forge -libxml2 2.12.7 h0f24e4e_4 conda-forge -libzlib 1.3.1 h2466b09_1 conda-forge -markdown 3.7 pypi_0 pypi -markupsafe 2.1.5 pypi_0 pypi -mkl 2024.1.0 h66d3029_694 conda-forge -numpy 1.26.4 py310hf667824_0 conda-forge -oauthlib 3.2.2 pypi_0 pypi -openssl 3.3.2 h2466b09_0 conda-forge -opt-einsum 3.4.0 pypi_0 pypi -packaging 24.1 pypi_0 pypi -pip 24.2 pyh8b19718_1 conda-forge -protobuf 3.19.6 py310h00ffb61_0 conda-forge -pthreads-win32 2.9.1 hfa6e2cd_3 conda-forge -pyasn1 0.6.1 pypi_0 pypi -pyasn1-modules 0.4.1 pypi_0 pypi -python 3.10.15 hfaddaf0_1_cpython conda-forge -python_abi 3.10 5_cp310 conda-forge -requests 2.32.3 pypi_0 pypi -requests-oauthlib 2.0.0 pypi_0 pypi -rsa 4.9 pypi_0 pypi -setuptools 75.1.0 pyhd8ed1ab_0 conda-forge -six 1.16.0 pyh6c4a22f_0 conda-forge -tbb 2021.13.0 hc790b64_0 conda-forge -tensorboard 2.9.1 pypi_0 pypi -tensorboard-data-server 0.6.1 pypi_0 pypi -tensorboard-plugin-wit 1.8.1 pypi_0 pypi -tensorflow 2.9.2 pypi_0 pypi -tensorflow-estimator 2.9.0 pypi_0 pypi -tensorflow-io-gcs-filesystem 0.31.0 pypi_0 pypi -termcolor 2.4.0 pypi_0 pypi -tk 8.6.13 h5226925_1 conda-forge -typing-extensions 4.12.2 hd8ed1ab_0 conda-forge -typing_extensions 4.12.2 pyha770c72_0 conda-forge -tzdata 2024a h8827d51_1 conda-forge -ucrt 10.0.22621.0 h57928b3_0 conda-forge -urllib3 2.2.3 pypi_0 pypi -vc 14.3 h8a93ad2_21 conda-forge -vc14_runtime 14.40.33810 ha82c5b3_21 conda-forge -vs2015_runtime 14.40.33810 h3bf8584_21 conda-forge -werkzeug 3.0.4 pypi_0 pypi -wheel 0.44.0 pyhd8ed1ab_0 conda-forge -wrapt 1.16.0 pypi_0 pypi -xz 5.2.6 h8d14728_0 conda-forge -zipp 3.20.2 pyhd8ed1ab_0 conda-forge -zlib 1.3.1 h2466b09_1 conda-forge diff --git a/pipdeptree.txt b/pipdeptree.txt index 7beb420..e69de29 100644 --- a/pipdeptree.txt +++ b/pipdeptree.txt @@ -1,86 +0,0 @@ -cached-property @ file:///home/conda/feedstock_root/build_artifacts/cached_property_1615209429212/work --e git+https://github.com/roomrys/envexp@374292d37a361ddd913e3493384fbfef8d1825a8#egg=experiment&subdirectory=envexp -importlib_metadata @ file:///home/conda/feedstock_root/build_artifacts/importlib-metadata_1726082825846/work - zipp @ file:///home/conda/feedstock_root/build_artifacts/zipp_1726248574750/work -ipykernel==6.21.2 - comm - debugpy==1.6.6 - ipython - jupyter-client - jupyter_core==5.2.0 - platformdirs - pywin32==305 - traitlets - matplotlib-inline - nest-asyncio==1.5.6 - packaging==24.1 - psutil==5.9.4 - pyzmq==25.0.0 - tornado==6.2 - traitlets -pip @ file:///home/conda/feedstock_root/build_artifacts/pip_1724954388421/work -tensorflow==2.9.2 - absl-py==2.1.0 - astunparse==1.6.3 - six @ file:///home/conda/feedstock_root/build_artifacts/six_1620240208055/work - wheel==0.44.0 - flatbuffers==1.12 - gast==0.4.0 - google-pasta==0.2.0 - six @ file:///home/conda/feedstock_root/build_artifacts/six_1620240208055/work - grpcio==1.66.2 - h5py @ file:///D:/bld/h5py_1717664858971/work - numpy @ file:///D:/bld/numpy_1707225570061/work/dist/numpy-1.26.4-cp310-cp310-win_amd64.whl#sha256=6761da75b1528684e6bf4dabdbdded9d1eb4d0e9b299482c7ce152cfb3155106 - keras==2.9.0 - Keras-Preprocessing==1.1.2 - numpy @ file:///D:/bld/numpy_1707225570061/work/dist/numpy-1.26.4-cp310-cp310-win_amd64.whl#sha256=6761da75b1528684e6bf4dabdbdded9d1eb4d0e9b299482c7ce152cfb3155106 - six @ file:///home/conda/feedstock_root/build_artifacts/six_1620240208055/work - libclang==18.1.1 - numpy @ file:///D:/bld/numpy_1707225570061/work/dist/numpy-1.26.4-cp310-cp310-win_amd64.whl#sha256=6761da75b1528684e6bf4dabdbdded9d1eb4d0e9b299482c7ce152cfb3155106 - opt_einsum==3.4.0 - packaging==24.1 - protobuf==3.19.6 - setuptools==75.1.0 - six @ file:///home/conda/feedstock_root/build_artifacts/six_1620240208055/work - tensorboard==2.9.1 - absl-py==2.1.0 - google-auth==2.35.0 - cachetools==5.5.0 - pyasn1_modules==0.4.1 - pyasn1==0.6.1 - rsa==4.9 - pyasn1==0.6.1 - google-auth-oauthlib==0.4.6 - google-auth==2.35.0 - cachetools==5.5.0 - pyasn1_modules==0.4.1 - pyasn1==0.6.1 - rsa==4.9 - pyasn1==0.6.1 - requests-oauthlib==2.0.0 - oauthlib==3.2.2 - requests==2.32.3 - certifi @ file:///home/conda/feedstock_root/build_artifacts/certifi_1725278078093/work/certifi - charset-normalizer==3.3.2 - idna==3.10 - urllib3==2.2.3 - grpcio==1.66.2 - Markdown==3.7 - numpy @ file:///D:/bld/numpy_1707225570061/work/dist/numpy-1.26.4-cp310-cp310-win_amd64.whl#sha256=6761da75b1528684e6bf4dabdbdded9d1eb4d0e9b299482c7ce152cfb3155106 - protobuf==3.19.6 - requests==2.32.3 - certifi @ file:///home/conda/feedstock_root/build_artifacts/certifi_1725278078093/work/certifi - charset-normalizer==3.3.2 - idna==3.10 - urllib3==2.2.3 - setuptools==75.1.0 - tensorboard-data-server==0.6.1 - tensorboard-plugin-wit==1.8.1 - Werkzeug==3.0.4 - MarkupSafe==2.1.5 - wheel==0.44.0 - tensorflow-estimator==2.9.0 - tensorflow-io-gcs-filesystem==0.31.0 - termcolor==2.4.0 - typing_extensions @ file:///home/conda/feedstock_root/build_artifacts/typing_extensions_1717802530399/work - wrapt==1.16.0 diff --git a/test.log b/test.log index 3598451..aeacc63 100644 --- a/test.log +++ b/test.log @@ -1,8 +1,5 @@ -2024-10-02 14:29:20,601 INFO envexp_utils.log Environment created successfully! -2024-10-02 14:29:26,860 INFO envexp_utils.log Running user-defined test code: -"""User-defined test code to run after the imports have been tested.""" - -if __name__ == "__main__": - import tensorflow - -2024-10-02 14:29:32,938 INFO envexp_utils.log Tests passed successfully! +2024-10-02 14:34:48,096 ERROR envexp_utils.log Failed to create environment! +Traceback (most recent call last): + File "d:\envexp\envexp\envexp_utils\log.py", line 123, in run_and_log + raise Exception(error) +Exception From d04a58207c4b2331a4e0dbc5c28c368febd40a65 Mon Sep 17 00:00:00 2001 From: roomrys <38435167+roomrys@users.noreply.github.com> Date: Wed, 2 Oct 2024 14:49:47 -0700 Subject: [PATCH 4/5] F: Remove protobuf constraint --- envexp/environment.yml | 2 +- envexp/test_env.py | 2 +- mamba_list.txt | 3 +++ pipdeptree.txt | 52 ++++++++++++++++++++++++++++++++++++++++++ test.log | 15 ++++++++---- 5 files changed, 67 insertions(+), 7 deletions(-) diff --git a/envexp/environment.yml b/envexp/environment.yml index b7d3542..b4402b5 100644 --- a/envexp/environment.yml +++ b/envexp/environment.yml @@ -5,7 +5,7 @@ dependencies: - python>=3.10.0,<3.11.0 - numpy>=1.16.5,<2.0 # tensorflow compiled with numpy 1.x - h5py - - protobuf <3.20.0 + - protobuf - certifi - importlib-metadata - six diff --git a/envexp/test_env.py b/envexp/test_env.py index 581ebae..8e21b87 100644 --- a/envexp/test_env.py +++ b/envexp/test_env.py @@ -138,5 +138,5 @@ def main(library=None, input_dir=None, commit_message=None): main( # library="qtpy", # input_dir="/Users/liezlmaree/Projects/sleap/sleap", - commit_message="Add PySide6 and opencv", + commit_message="Remove protobuf constraint", ) diff --git a/mamba_list.txt b/mamba_list.txt index e69de29..4d19165 100644 --- a/mamba_list.txt +++ b/mamba_list.txt @@ -0,0 +1,3 @@ +# packages in environment at C:\Users\TalmoLab\mambaforge\envs\experiment: +# +# Name Version Build Channel diff --git a/pipdeptree.txt b/pipdeptree.txt index e69de29..c093897 100644 --- a/pipdeptree.txt +++ b/pipdeptree.txt @@ -0,0 +1,52 @@ +brotlipy @ file:///D:/bld/brotlipy_1666764804378/work + cffi @ file:///D:/bld/cffi_1671179506518/work + pycparser @ file:///home/conda/feedstock_root/build_artifacts/pycparser_1636257122734/work +conda-package-handling @ file:///home/conda/feedstock_root/build_artifacts/conda-package-handling_1669907009957/work + conda_package_streaming @ file:///home/conda/feedstock_root/build_artifacts/conda-package-streaming_1669733752472/work + requests @ file:///home/conda/feedstock_root/build_artifacts/requests_1680286922386/work + certifi==2022.12.7 + charset-normalizer @ file:///home/conda/feedstock_root/build_artifacts/charset-normalizer_1678108872112/work + idna @ file:///home/conda/feedstock_root/build_artifacts/idna_1663625384323/work + urllib3 @ file:///home/conda/feedstock_root/build_artifacts/urllib3_1678635778344/work + zstandard==0.19.0 +ipykernel==6.21.2 + comm + debugpy==1.6.6 + ipython + jupyter-client + jupyter_core==5.2.0 + platformdirs + pywin32==305 + traitlets + matplotlib-inline + nest-asyncio==1.5.6 + packaging + psutil==5.9.4 + pyzmq==25.0.0 + tornado==6.2 + traitlets +mamba @ file:///D:/bld/mamba-split_1680002565588/work/mamba + conda==23.1.0 + menuinst @ file:///D:/bld/menuinst_1666839998718/work + pluggy @ file:///home/conda/feedstock_root/build_artifacts/pluggy_1667232663820/work + pycosat @ file:///D:/bld/pycosat_1666836675990/work + requests @ file:///home/conda/feedstock_root/build_artifacts/requests_1680286922386/work + certifi==2022.12.7 + charset-normalizer @ file:///home/conda/feedstock_root/build_artifacts/charset-normalizer_1678108872112/work + idna @ file:///home/conda/feedstock_root/build_artifacts/idna_1663625384323/work + urllib3 @ file:///home/conda/feedstock_root/build_artifacts/urllib3_1678635778344/work + ruamel.yaml @ file:///D:/bld/ruamel.yaml_1678273308128/work + ruamel.yaml.clib @ file:///D:/bld/ruamel.yaml.clib_1670412994006/work + tqdm @ file:///home/conda/feedstock_root/build_artifacts/tqdm_1677948868469/work + colorama @ file:///home/conda/feedstock_root/build_artifacts/colorama_1666700638685/work + libmambapy @ file:///D:/bld/mamba-split_1680002565588/work/libmambapy +pip==24.0 +pyOpenSSL @ file:///home/conda/feedstock_root/build_artifacts/pyopenssl_1680037383858/work + cryptography @ file:///D:/bld/cryptography-split_1679811386218/work + cffi @ file:///D:/bld/cffi_1671179506518/work + pycparser @ file:///home/conda/feedstock_root/build_artifacts/pycparser_1636257122734/work +PySocks @ file:///D:/bld/pysocks_1661604991356/work +setuptools==65.6.3 +toolz @ file:///home/conda/feedstock_root/build_artifacts/toolz_1657485559105/work +wheel==0.40.0 +win-inet-pton @ file:///D:/bld/win_inet_pton_1667051142467/work diff --git a/test.log b/test.log index aeacc63..4835d05 100644 --- a/test.log +++ b/test.log @@ -1,5 +1,10 @@ -2024-10-02 14:34:48,096 ERROR envexp_utils.log Failed to create environment! -Traceback (most recent call last): - File "d:\envexp\envexp\envexp_utils\log.py", line 123, in run_and_log - raise Exception(error) -Exception +2024-10-02 14:49:32,233 ERROR envexp_utils.log Failed to create environment! +Traceback (most recent call last): + File "d:\envexp\envexp\envexp_utils\log.py", line 123, in run_and_log + raise Exception(error) +Exception: ERROR conda.core.link:_execute(745): An error occurred while installing package 'conda-forge::vc14_runtime-14.40.33810-ha82c5b3_21'. + +[Errno 13] Permission denied: 'C:\\Users\\TalmoLab\\mambaforge\\envs\\experiment\\vcruntime140.dll' +() + + From 824da0605517a8873a678531fdf11de224212e49 Mon Sep 17 00:00:00 2001 From: roomrys <38435167+roomrys@users.noreply.github.com> Date: Wed, 2 Oct 2024 14:55:22 -0700 Subject: [PATCH 5/5] P: Remove protobuf constraint --- mamba_list.txt | 153 +++++++++++++++++++++++++++++++++++++++++++++++++ pipdeptree.txt | 112 ++++++++++++++++++++++++------------ test.log | 18 +++--- 3 files changed, 236 insertions(+), 47 deletions(-) diff --git a/mamba_list.txt b/mamba_list.txt index 4d19165..a08d07d 100644 --- a/mamba_list.txt +++ b/mamba_list.txt @@ -1,3 +1,156 @@ # packages in environment at C:\Users\TalmoLab\mambaforge\envs\experiment: # # Name Version Build Channel +absl-py 2.1.0 pypi_0 pypi +aom 3.9.1 he0c23c2_0 conda-forge +astunparse 1.6.3 pypi_0 pypi +bzip2 1.0.8 h2466b09_7 conda-forge +ca-certificates 2024.8.30 h56e8100_0 conda-forge +cached-property 1.5.2 hd8ed1ab_1 conda-forge +cached_property 1.5.2 pyha770c72_1 conda-forge +cachetools 5.5.0 pypi_0 pypi +cairo 1.18.0 h32b962e_3 conda-forge +certifi 2024.8.30 pyhd8ed1ab_0 conda-forge +charset-normalizer 3.3.2 pypi_0 pypi +dav1d 1.2.1 hcfcfb64_0 conda-forge +double-conversion 3.3.0 h63175ca_0 conda-forge +expat 2.6.3 he0c23c2_0 conda-forge +experiment 0.1.0 pypi_0 pypi +ffmpeg 7.1.0 gpl_h0820249_100 conda-forge +flatbuffers 1.12 pypi_0 pypi +font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge +font-ttf-inconsolata 3.000 h77eed37_0 conda-forge +font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge +font-ttf-ubuntu 0.83 h77eed37_3 conda-forge +fontconfig 2.14.2 hbde0cde_0 conda-forge +fonts-conda-ecosystem 1 0 conda-forge +fonts-conda-forge 1 0 conda-forge +freeglut 3.2.2 he0c23c2_3 conda-forge +freetype 2.12.1 hdaf720e_2 conda-forge +gast 0.4.0 pypi_0 pypi +glib 2.82.1 h7025463_0 conda-forge +glib-tools 2.82.1 h4394cf3_0 conda-forge +google-auth 2.35.0 pypi_0 pypi +google-auth-oauthlib 0.4.6 pypi_0 pypi +google-pasta 0.2.0 pypi_0 pypi +graphite2 1.3.13 h63175ca_1003 conda-forge +grpcio 1.66.2 pypi_0 pypi +gst-plugins-base 1.24.7 hb0a98b8_0 conda-forge +gstreamer 1.24.7 h5006eae_0 conda-forge +h5py 3.11.0 nompi_py310h2b0be38_102 conda-forge +harfbuzz 9.0.0 h2bedf89_1 conda-forge +hdf5 1.14.3 nompi_h2b43c12_105 conda-forge +icu 75.1 he0c23c2_0 conda-forge +idna 3.10 pypi_0 pypi +imath 3.1.12 hbb528cf_0 conda-forge +importlib-metadata 8.5.0 pyha770c72_0 conda-forge +intel-openmp 2024.2.1 h57928b3_1083 conda-forge +jasper 4.2.4 hcb1a123_0 conda-forge +keras 2.9.0 pypi_0 pypi +keras-preprocessing 1.1.2 pypi_0 pypi +khronos-opencl-icd-loader 2024.05.08 hc70643c_0 conda-forge +krb5 1.21.3 hdf4eb48_0 conda-forge +lerc 4.0.0 h63175ca_0 conda-forge +libabseil 20240722.0 cxx17_he0c23c2_1 conda-forge +libaec 1.1.3 h63175ca_0 conda-forge +libasprintf 0.22.5 h5728263_3 conda-forge +libblas 3.9.0 24_win64_mkl conda-forge +libcblas 3.9.0 24_win64_mkl conda-forge +libclang 18.1.1 pypi_0 pypi +libclang13 19.1.0 default_ha5278ca_0 conda-forge +libcurl 8.10.1 h1ee3ff0_0 conda-forge +libdeflate 1.21 h2466b09_0 conda-forge +libexpat 2.6.3 he0c23c2_0 conda-forge +libffi 3.4.2 h8ffe710_5 conda-forge +libgettextpo 0.22.5 h5728263_3 conda-forge +libglib 2.82.1 h7025463_0 conda-forge +libhwloc 2.11.1 default_h8125262_1000 conda-forge +libiconv 1.17 hcfcfb64_2 conda-forge +libintl 0.22.5 h5728263_3 conda-forge +libintl-devel 0.22.5 h5728263_3 conda-forge +libjpeg-turbo 3.0.0 hcfcfb64_1 conda-forge +liblapack 3.9.0 24_win64_mkl conda-forge +liblapacke 3.9.0 24_win64_mkl conda-forge +libogg 1.3.5 h2466b09_0 conda-forge +libopencv 4.10.0 qt5_py310h815bbe2_507 conda-forge +libopenvino 2024.4.0 hfe1841e_1 conda-forge +libopenvino-auto-batch-plugin 2024.4.0 h04f32e0_1 conda-forge +libopenvino-auto-plugin 2024.4.0 h04f32e0_1 conda-forge +libopenvino-hetero-plugin 2024.4.0 h372dad0_1 conda-forge +libopenvino-intel-cpu-plugin 2024.4.0 hfe1841e_1 conda-forge +libopenvino-intel-gpu-plugin 2024.4.0 hfe1841e_1 conda-forge +libopenvino-ir-frontend 2024.4.0 h372dad0_1 conda-forge +libopenvino-onnx-frontend 2024.4.0 h5707d70_1 conda-forge +libopenvino-paddle-frontend 2024.4.0 h5707d70_1 conda-forge +libopenvino-pytorch-frontend 2024.4.0 he0c23c2_1 conda-forge +libopenvino-tensorflow-frontend 2024.4.0 hf4e5e90_1 conda-forge +libopenvino-tensorflow-lite-frontend 2024.4.0 he0c23c2_1 conda-forge +libopus 1.3.1 h8ffe710_1 conda-forge +libpng 1.6.44 h3ca93ac_0 conda-forge +libprotobuf 5.27.5 hcaed137_2 conda-forge +libsqlite 3.46.1 h2466b09_0 conda-forge +libssh2 1.11.0 h7dfc565_0 conda-forge +libtiff 4.7.0 hb151862_0 conda-forge +libvorbis 1.3.7 h0e60522_0 conda-forge +libwebp-base 1.4.0 hcfcfb64_0 conda-forge +libxml2 2.12.7 h0f24e4e_4 conda-forge +libxslt 1.1.39 h3df6e99_0 conda-forge +libzlib 1.3.1 h2466b09_1 conda-forge +markdown 3.7 pypi_0 pypi +markupsafe 2.1.5 pypi_0 pypi +mkl 2024.1.0 h66d3029_694 conda-forge +numpy 1.26.4 py310hf667824_0 conda-forge +oauthlib 3.2.2 pypi_0 pypi +opencv 4.10.0 qt5_py310h83837c2_507 conda-forge +openexr 3.2.2 h9aba623_2 conda-forge +openh264 2.4.1 h63175ca_0 conda-forge +openssl 3.3.2 h2466b09_0 conda-forge +opt-einsum 3.4.0 pypi_0 pypi +packaging 24.1 pyhd8ed1ab_0 conda-forge +pcre2 10.44 h3d7b363_2 conda-forge +pip 24.2 pyh8b19718_1 conda-forge +pixman 0.43.4 h63175ca_0 conda-forge +protobuf 3.19.6 pypi_0 pypi +pthreads-win32 2.9.1 hfa6e2cd_3 conda-forge +pugixml 1.14 h63175ca_0 conda-forge +py-opencv 4.10.0 qt5_py310h2c7f3ac_507 conda-forge +pyasn1 0.6.1 pypi_0 pypi +pyasn1-modules 0.4.1 pypi_0 pypi +pyside6 6.7.2 py310h60c6385_4 conda-forge +python 3.10.15 hfaddaf0_1_cpython conda-forge +python_abi 3.10 5_cp310 conda-forge +qt-main 5.15.8 h264fbc2_26 conda-forge +qt6-main 6.7.2 h2fedb45_5 conda-forge +requests 2.32.3 pypi_0 pypi +requests-oauthlib 2.0.0 pypi_0 pypi +rsa 4.9 pypi_0 pypi +setuptools 75.1.0 pyhd8ed1ab_0 conda-forge +six 1.16.0 pyh6c4a22f_0 conda-forge +snappy 1.2.1 h23299a8_0 conda-forge +svt-av1 2.2.1 he0c23c2_0 conda-forge +tbb 2021.13.0 hc790b64_0 conda-forge +tensorboard 2.9.1 pypi_0 pypi +tensorboard-data-server 0.6.1 pypi_0 pypi +tensorboard-plugin-wit 1.8.1 pypi_0 pypi +tensorflow 2.9.2 pypi_0 pypi +tensorflow-estimator 2.9.0 pypi_0 pypi +tensorflow-io-gcs-filesystem 0.31.0 pypi_0 pypi +termcolor 2.4.0 pypi_0 pypi +tk 8.6.13 h5226925_1 conda-forge +typing-extensions 4.12.2 hd8ed1ab_0 conda-forge +typing_extensions 4.12.2 pyha770c72_0 conda-forge +tzdata 2024a h8827d51_1 conda-forge +ucrt 10.0.22621.0 h57928b3_0 conda-forge +urllib3 2.2.3 pypi_0 pypi +vc 14.3 h8a93ad2_21 conda-forge +vc14_runtime 14.40.33810 ha82c5b3_21 conda-forge +vs2015_runtime 14.40.33810 h3bf8584_21 conda-forge +werkzeug 3.0.4 pypi_0 pypi +wheel 0.44.0 pyhd8ed1ab_0 conda-forge +wrapt 1.16.0 pypi_0 pypi +x264 1!164.3095 h8ffe710_2 conda-forge +x265 3.5 h2d74725_3 conda-forge +xz 5.2.6 h8d14728_0 conda-forge +zipp 3.20.2 pyhd8ed1ab_0 conda-forge +zlib 1.3.1 h2466b09_1 conda-forge +zstd 1.5.6 h0ea2cb4_0 conda-forge diff --git a/pipdeptree.txt b/pipdeptree.txt index c093897..9aa1b97 100644 --- a/pipdeptree.txt +++ b/pipdeptree.txt @@ -1,14 +1,7 @@ -brotlipy @ file:///D:/bld/brotlipy_1666764804378/work - cffi @ file:///D:/bld/cffi_1671179506518/work - pycparser @ file:///home/conda/feedstock_root/build_artifacts/pycparser_1636257122734/work -conda-package-handling @ file:///home/conda/feedstock_root/build_artifacts/conda-package-handling_1669907009957/work - conda_package_streaming @ file:///home/conda/feedstock_root/build_artifacts/conda-package-streaming_1669733752472/work - requests @ file:///home/conda/feedstock_root/build_artifacts/requests_1680286922386/work - certifi==2022.12.7 - charset-normalizer @ file:///home/conda/feedstock_root/build_artifacts/charset-normalizer_1678108872112/work - idna @ file:///home/conda/feedstock_root/build_artifacts/idna_1663625384323/work - urllib3 @ file:///home/conda/feedstock_root/build_artifacts/urllib3_1678635778344/work - zstandard==0.19.0 +cached-property @ file:///home/conda/feedstock_root/build_artifacts/cached_property_1615209429212/work +-e git+https://github.com/roomrys/envexp@d04a58207c4b2331a4e0dbc5c28c368febd40a65#egg=experiment&subdirectory=envexp +importlib_metadata @ file:///home/conda/feedstock_root/build_artifacts/importlib-metadata_1726082825846/work + zipp @ file:///home/conda/feedstock_root/build_artifacts/zipp_1726248574750/work ipykernel==6.21.2 comm debugpy==1.6.6 @@ -20,33 +13,78 @@ ipykernel==6.21.2 traitlets matplotlib-inline nest-asyncio==1.5.6 - packaging + packaging @ file:///home/conda/feedstock_root/build_artifacts/packaging_1718189413536/work psutil==5.9.4 pyzmq==25.0.0 tornado==6.2 traitlets -mamba @ file:///D:/bld/mamba-split_1680002565588/work/mamba - conda==23.1.0 - menuinst @ file:///D:/bld/menuinst_1666839998718/work - pluggy @ file:///home/conda/feedstock_root/build_artifacts/pluggy_1667232663820/work - pycosat @ file:///D:/bld/pycosat_1666836675990/work - requests @ file:///home/conda/feedstock_root/build_artifacts/requests_1680286922386/work - certifi==2022.12.7 - charset-normalizer @ file:///home/conda/feedstock_root/build_artifacts/charset-normalizer_1678108872112/work - idna @ file:///home/conda/feedstock_root/build_artifacts/idna_1663625384323/work - urllib3 @ file:///home/conda/feedstock_root/build_artifacts/urllib3_1678635778344/work - ruamel.yaml @ file:///D:/bld/ruamel.yaml_1678273308128/work - ruamel.yaml.clib @ file:///D:/bld/ruamel.yaml.clib_1670412994006/work - tqdm @ file:///home/conda/feedstock_root/build_artifacts/tqdm_1677948868469/work - colorama @ file:///home/conda/feedstock_root/build_artifacts/colorama_1666700638685/work - libmambapy @ file:///D:/bld/mamba-split_1680002565588/work/libmambapy -pip==24.0 -pyOpenSSL @ file:///home/conda/feedstock_root/build_artifacts/pyopenssl_1680037383858/work - cryptography @ file:///D:/bld/cryptography-split_1679811386218/work - cffi @ file:///D:/bld/cffi_1671179506518/work - pycparser @ file:///home/conda/feedstock_root/build_artifacts/pycparser_1636257122734/work -PySocks @ file:///D:/bld/pysocks_1661604991356/work -setuptools==65.6.3 -toolz @ file:///home/conda/feedstock_root/build_artifacts/toolz_1657485559105/work -wheel==0.40.0 -win-inet-pton @ file:///D:/bld/win_inet_pton_1667051142467/work +opencv-python==4.10.0 +opencv-python-headless==4.10.0 +pip @ file:///home/conda/feedstock_root/build_artifacts/pip_1724954388421/work +PySide6==6.7.2 +shiboken6==6.7.2 +tensorflow==2.9.2 + absl-py==2.1.0 + astunparse==1.6.3 + six @ file:///home/conda/feedstock_root/build_artifacts/six_1620240208055/work + wheel==0.44.0 + flatbuffers==1.12 + gast==0.4.0 + google-pasta==0.2.0 + six @ file:///home/conda/feedstock_root/build_artifacts/six_1620240208055/work + grpcio==1.66.2 + h5py @ file:///D:/bld/h5py_1717664858971/work + numpy @ file:///D:/bld/numpy_1707225570061/work/dist/numpy-1.26.4-cp310-cp310-win_amd64.whl#sha256=6761da75b1528684e6bf4dabdbdded9d1eb4d0e9b299482c7ce152cfb3155106 + keras==2.9.0 + Keras-Preprocessing==1.1.2 + numpy @ file:///D:/bld/numpy_1707225570061/work/dist/numpy-1.26.4-cp310-cp310-win_amd64.whl#sha256=6761da75b1528684e6bf4dabdbdded9d1eb4d0e9b299482c7ce152cfb3155106 + six @ file:///home/conda/feedstock_root/build_artifacts/six_1620240208055/work + libclang==18.1.1 + numpy @ file:///D:/bld/numpy_1707225570061/work/dist/numpy-1.26.4-cp310-cp310-win_amd64.whl#sha256=6761da75b1528684e6bf4dabdbdded9d1eb4d0e9b299482c7ce152cfb3155106 + opt_einsum==3.4.0 + packaging @ file:///home/conda/feedstock_root/build_artifacts/packaging_1718189413536/work + protobuf==3.19.6 + setuptools==75.1.0 + six @ file:///home/conda/feedstock_root/build_artifacts/six_1620240208055/work + tensorboard==2.9.1 + absl-py==2.1.0 + google-auth==2.35.0 + cachetools==5.5.0 + pyasn1_modules==0.4.1 + pyasn1==0.6.1 + rsa==4.9 + pyasn1==0.6.1 + google-auth-oauthlib==0.4.6 + google-auth==2.35.0 + cachetools==5.5.0 + pyasn1_modules==0.4.1 + pyasn1==0.6.1 + rsa==4.9 + pyasn1==0.6.1 + requests-oauthlib==2.0.0 + oauthlib==3.2.2 + requests==2.32.3 + certifi @ file:///home/conda/feedstock_root/build_artifacts/certifi_1725278078093/work/certifi + charset-normalizer==3.3.2 + idna==3.10 + urllib3==2.2.3 + grpcio==1.66.2 + Markdown==3.7 + numpy @ file:///D:/bld/numpy_1707225570061/work/dist/numpy-1.26.4-cp310-cp310-win_amd64.whl#sha256=6761da75b1528684e6bf4dabdbdded9d1eb4d0e9b299482c7ce152cfb3155106 + protobuf==3.19.6 + requests==2.32.3 + certifi @ file:///home/conda/feedstock_root/build_artifacts/certifi_1725278078093/work/certifi + charset-normalizer==3.3.2 + idna==3.10 + urllib3==2.2.3 + setuptools==75.1.0 + tensorboard-data-server==0.6.1 + tensorboard-plugin-wit==1.8.1 + Werkzeug==3.0.4 + MarkupSafe==2.1.5 + wheel==0.44.0 + tensorflow-estimator==2.9.0 + tensorflow-io-gcs-filesystem==0.31.0 + termcolor==2.4.0 + typing_extensions @ file:///home/conda/feedstock_root/build_artifacts/typing_extensions_1717802530399/work + wrapt==1.16.0 diff --git a/test.log b/test.log index 4835d05..9eb4487 100644 --- a/test.log +++ b/test.log @@ -1,10 +1,8 @@ -2024-10-02 14:49:32,233 ERROR envexp_utils.log Failed to create environment! -Traceback (most recent call last): - File "d:\envexp\envexp\envexp_utils\log.py", line 123, in run_and_log - raise Exception(error) -Exception: ERROR conda.core.link:_execute(745): An error occurred while installing package 'conda-forge::vc14_runtime-14.40.33810-ha82c5b3_21'. - -[Errno 13] Permission denied: 'C:\\Users\\TalmoLab\\mambaforge\\envs\\experiment\\vcruntime140.dll' -() - - +2024-10-02 14:54:59,748 INFO envexp_utils.log Environment created successfully! +2024-10-02 14:55:07,078 INFO envexp_utils.log Running user-defined test code: +"""User-defined test code to run after the imports have been tested.""" + +if __name__ == "__main__": + import tensorflow + +2024-10-02 14:55:12,526 INFO envexp_utils.log Tests passed successfully!