Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Error during calibration_coarse #18

Open
emilaz opened this issue Jul 13, 2017 · 5 comments
Open

Error during calibration_coarse #18

emilaz opened this issue Jul 13, 2017 · 5 comments

Comments

@emilaz
Copy link

emilaz commented Jul 13, 2017

Hello,
when trying to run the calibration_coarse launch file, I get the following error message

[calibration_coarse-1] process has died [pid 12730, exit code -11, cmd /home/eaz/catkin_ws/devel/lib/but_calibration_camera_velodyne/calibration __name:=calibration_coarse __log:=/home/eaz/.ros/log/913d49d4-67d6-11e7-8057-54ee7530ff70/calibration_coarse-1.log].
log file: /home/eaz/.ros/log/913d49d4-67d6-11e7-8057-54ee7530ff70/calibration_coarse-1*.log

I have the following topics running

Published topics:
 * /webcam/webcam_image_view/parameter_updates [dynamic_reconfigure/Config] 1 publisher
 * /velodyne_nodelet_manager_cloud/parameter_updates [dynamic_reconfigure/Config] 1 publisher
 * /webcam/image_raw/compressed/parameter_updates [dynamic_reconfigure/Config] 1 publisher
 * /velodyne_nodelet_manager_cloud/parameter_descriptions [dynamic_reconfigure/ConfigDescription] 1 publisher
 * /velodyne_nodelet_manager_driver/parameter_updates [dynamic_reconfigure/Config] 1 publisher
 * /webcam/image_raw/theora/parameter_descriptions [dynamic_reconfigure/ConfigDescription] 1 publisher
 * /rosout_agg [rosgraph_msgs/Log] 1 publisher
 * /clicked_point [geometry_msgs/PointStamped] 1 publisher
 * /webcam/image_raw [sensor_msgs/Image] 1 publisher
 * /velodyne_nodelet_manager/bond [bond/Status] 3 publishers
 * /velodyne_packets [velodyne_msgs/VelodyneScan] 1 publisher
 * /velodyne_nodelet_manager_driver/parameter_descriptions [dynamic_reconfigure/ConfigDescription] 1 publisher
 * /diagnostics [diagnostic_msgs/DiagnosticArray] 1 publisher
 * /webcam/webcam_image_view/parameter_descriptions [dynamic_reconfigure/ConfigDescription] 1 publisher
 * /webcam/image_raw/compressedDepth [sensor_msgs/CompressedImage] 1 publisher
 * /webcam/camera_info [sensor_msgs/CameraInfo] 1 publisher
 * /rosout [rosgraph_msgs/Log] 8 publishers
 * /webcam/image_raw/theora [theora_image_transport/Packet] 1 publisher
 * /webcam/image_raw/compressedDepth/parameter_descriptions [dynamic_reconfigure/ConfigDescription] 1 publisher
 * /velodyne_points [sensor_msgs/PointCloud2] 1 publisher
 * /initialpose [geometry_msgs/PoseWithCovarianceStamped] 1 publisher
 * /move_base_simple/goal [geometry_msgs/PoseStamped] 1 publisher
 * /webcam/webcam_image_view/output [sensor_msgs/Image] 1 publisher
 * /webcam/image_raw/compressedDepth/parameter_updates [dynamic_reconfigure/Config] 1 publisher
 * /webcam/image_raw/compressed [sensor_msgs/CompressedImage] 1 publisher
 * /webcam/image_raw/theora/parameter_updates [dynamic_reconfigure/Config] 1 publisher
 * /webcam/image_raw/compressed/parameter_descriptions [dynamic_reconfigure/ConfigDescription] 1 publisher

Subscribed topics:
 * /velodyne_nodelet_manager/bond [bond/Status] 3 subscribers
 * /webcam/image_raw [sensor_msgs/Image] 1 subscriber
 * /rosout [rosgraph_msgs/Log] 1 subscriber
 * /velodyne_points [sensor_msgs/PointCloud2] 1 subscriber
 * /tf [tf2_msgs/TFMessage] 1 subscriber
 * /tf_static [tf2_msgs/TFMessage] 1 subscriber
 * /velodyne_packets [velodyne_msgs/VelodyneScan] 1 subscriber
 * /rosout_agg [rosgraph_msgs/Log] 1 subscriber

I changed the provided config file as follows:

but_calibration_camera_velodyne:
  camera_frame_topic: /webcam/image_raw
  camera_info_topic: /webcam/camera_info
  marker: {circles_distance: 0.23, circles_radius: 0.0825}
  velodyne_topic: /velodyne_points

I am using ROS Indigo on Ubuntu 14.04 and OpenCV 2.4.

Any help is much appreciated!

Greetings,
emilaz
@martin-velas
Copy link
Contributor

Hi, try running the node with debugger to provide more info. This info is unfortunately not sufficient.

@emilaz
Copy link
Author

emilaz commented Jul 17, 2017

Hey,
thanks for the reply. In Debug mode, I get the following message (the crash occurs almost immediately)

debuThread 1 "calibration" received signal SIGSEGV, Segmentation fault.
0x00007ffff6c0cae0 in boost::math::lanczos::lanczos_initializer<boost::math::lanczos::lanczos17m64, long double>::init::init() () from /usr/lib/libpcl_sample_consensus.so.1.7

Also, is it neccessary to publish the pointcloud and image data via separate nodes that are not included in the but_velodyne_package (I'm thinking velodyne_driver for example)?

@martin-velas
Copy link
Contributor

Aaaah! I have also occured this issue. It was really tricky but I finally found out, that PCL (at least the elder versions) has/had problem when compiling with C++11 (see for example felixendres/rgbdslam_v2#8). Is it your case? Try to turn off C++11 compilation.

@emilaz
Copy link
Author

emilaz commented Jul 19, 2017 •
edited
Loading

I tried running it with C++03 and got a compilation error as some of the syntax is not understood by the compiler. C++14 yields the same error as C++11, so this unfortunately didn't help. I then installed the a newer PCL1.7.2 version you can see below, which also didn't help.
I then installed PCL1.8 from source following the instructions on the link you posted and tried to uninstall PCL1.7 to avoid conflicts. However, the ros-pcl packages depend on PCL 1.7. I then had to reinstall PCL1.7 and rebuild the dependencies and now get the following error.

-- Using these message generators: gencpp;genlisp;genpy
-- Boost version: 1.54.0
-- Found the following Boost libraries:
--   system
--   filesystem
--   thread
--   date_time
--   iostreams
--   serialization
-- Could NOT find ensenso (missing:  ENSENSO_LIBRARY ENSENSO_INCLUDE_DIR) 
** WARNING ** io features related to ensenso will be disabled
-- Could NOT find DAVIDSDK (missing:  DAVIDSDK_LIBRARY DAVIDSDK_INCLUDE_DIR) 
** WARNING ** io features related to davidSDK will be disabled
-- Could NOT find DSSDK (missing:  _DSSDK_LIBRARIES) 
** WARNING ** io features related to dssdk will be disabled
** WARNING ** io features related to pcap will be disabled
** WARNING ** io features related to png will be disabled
** WARNING ** io features related to libusb-1.0 will be disabled
-- Could NOT find ensenso (missing:  ENSENSO_LIBRARY ENSENSO_INCLUDE_DIR) 
** WARNING ** visualization features related to ensenso will be disabled
-- Could NOT find DAVIDSDK (missing:  DAVIDSDK_LIBRARY DAVIDSDK_INCLUDE_DIR) 
** WARNING ** visualization features related to davidSDK will be disabled
-- Could NOT find DSSDK (missing:  _DSSDK_LIBRARIES) 
** WARNING ** visualization features related to dssdk will be disabled
-- Could NOT find RSSDK (missing:  _RSSDK_LIBRARIES) 
** WARNING ** visualization features related to rssdk will be disabled
-- looking for PCL_COMMON
-- looking for PCL_OCTREE
-- looking for PCL_IO
-- looking for PCL_KDTREE
-- looking for PCL_SEARCH
-- looking for PCL_SURFACE
-- looking for PCL_SAMPLE_CONSENSUS
-- looking for PCL_FILTERS
-- looking for PCL_2D
-- looking for PCL_FEATURES
-- looking for PCL_GEOMETRY
-- looking for PCL_VISUALIZATION
-- looking for PCL_ML
-- looking for PCL_TRACKING
-- looking for PCL_STEREO
-- looking for PCL_KEYPOINTS
-- looking for PCL_SEGMENTATION
-- looking for PCL_REGISTRATION
-- looking for PCL_RECOGNITION
-- looking for PCL_OUTOFCORE
-- looking for PCL_PEOPLE
-- +++ processing catkin package: 'velodyne_driver'
-- ==> add_subdirectory(velodyne_driver/velodyne_driver)
-- Using these message generators: gencpp;genlisp;genpy
-- Boost version: 1.54.0
-- Found the following Boost libraries:
--   thread
-- +++ processing catkin package: 'velodyne_pointcloud'
-- ==> add_subdirectory(velodyne_driver/velodyne_pointcloud)
-- Using these message generators: gencpp;genlisp;genpy
-- Boost version: 1.54.0
-- Found the following Boost libraries:
--   signals
-- +++ processing catkin package: 'but_calibration_camera_velodyne'
-- ==> add_subdirectory(but_velodyne/but_calibration_camera_velodyne)
-- Using these message generators: gencpp;genlisp;genpy
-- +++ processing catkin package: 'but_velodyne_odom'
-- ==> add_subdirectory(but_velodyne/but_velodyne_odom)
-- Using these message generators: gencpp;genlisp;genpy
-- Eigen found (include: /usr/include/eigen3)
-- +++ processing catkin package: 'video_stream_opencv'
-- ==> add_subdirectory(video_stream_opencv)
-- +++ processing catkin package: 'but_velodyne_proc'
-- ==> add_subdirectory(but_velodyne/but_velodyne_proc)
-- Using these message generators: gencpp;genlisp;genpy
-- Eigen found (include: /usr/include/eigen3)
-- Configuring done
CMake Warning at but_velodyne/but_velodyne_odom/CMakeLists.txt:175 (add_library):
  Cannot generate a safe linker search path for target
  butvelo_collar_line_odom_nodelet because files in some directories may
  conflict with libraries in implicit directories:

    link library [libpcl_common.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_octree.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_io.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_kdtree.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_search.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_sample_consensus.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_filters.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_features.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_keypoints.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_segmentation.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_visualization.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_outofcore.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_registration.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_recognition.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_surface.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_people.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_tracking.so] in /usr/lib may be hidden by files in:
      /usr/local/lib

  Some of these libraries may not be found correctly.


CMake Warning at but_velodyne/but_velodyne_odom/CMakeLists.txt:42 (add_library):
  Cannot generate a safe linker search path for target butveloodom because
  files in some directories may conflict with libraries in implicit
  directories:

    link library [libpcl_common.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_octree.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_io.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_kdtree.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_search.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_sample_consensus.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_filters.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_features.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_keypoints.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_segmentation.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_visualization.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_outofcore.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_registration.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_recognition.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_surface.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_people.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_tracking.so] in /usr/lib may be hidden by files in:
      /usr/local/lib

  Some of these libraries may not be found correctly.


CMake Warning at but_velodyne/but_velodyne_odom/CMakeLists.txt:171 (add_executable):
  Cannot generate a safe linker search path for target collar_line_odom
  because files in some directories may conflict with libraries in implicit
  directories:

    link library [libpcl_common.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_octree.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_io.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_kdtree.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_search.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_sample_consensus.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_filters.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_features.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_keypoints.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_segmentation.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_visualization.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_outofcore.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_registration.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_recognition.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_surface.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_people.so] in /usr/lib may be hidden by files in:
      /usr/local/lib
    link library [libpcl_tracking.so] in /usr/lib may be hidden by files in:
      /usr/local/lib

  Some of these libraries may not be found correctly.


-- Generating done
-- Build files have been written to: /home/eaz/catkin_ws/build
####
#### Running command: "make -j8 -l8" in "/home/eaz/catkin_ws/build"
####
[  0%] Built target std_msgs_generate_messages_lisp
[  0%] [  0%] Built target std_msgs_generate_messages_cpp
Built target std_msgs_generate_messages_py
[  1%] Built target velodyne_driver_gencfg
[  1%] Built target nodelet_generate_messages_cpp
[  1%] [  3%] Built target savecloud_node
Built target actionlib_msgs_generate_messages_cpp
[  3%] [  3%] Built target rosgraph_msgs_generate_messages_cpp
Built target tf_generate_messages_py
[  3%] [  3%] Built target rosgraph_msgs_generate_messages_lisp
Built target geometry_msgs_generate_messages_lisp
[  3%] [  3%] Built target geometry_msgs_generate_messages_py
Built target actionlib_generate_messages_cpp
[  3%] [  3%] [  3%] [  3%] Built target actionlib_generate_messages_lisp
Built target _velodyne_msgs_generate_messages_check_deps_VelodynePacket
Built target _velodyne_msgs_generate_messages_check_deps_VelodyneScan
Built target bond_generate_messages_cpp
[  3%] [  3%] Built target geometry_msgs_generate_messages_cpp
Built target roscpp_generate_messages_lisp
[  3%] [  3%] Built target tf_generate_messages_lisp
[  3%] [  3%] Built target tf_generate_messages_cpp
Built target sensor_msgs_generate_messages_cpp
Built target roscpp_generate_messages_cpp
[  3%] Built target actionlib_msgs_generate_messages_py
[  3%] Built target sensor_msgs_generate_messages_lisp
[  3%] Built target roscpp_generate_messages_py
[  3%] [  3%] [  3%] [  3%] [  3%] [  3%] Built target rosgraph_msgs_generate_messages_py
Built target actionlib_msgs_generate_messages_lisp
Built target diagnostic_msgs_generate_messages_cpp
Built target actionlib_generate_messages_py
Built target sensor_msgs_generate_messages_py
Built target tf2_msgs_generate_messages_py
[  3%] [  3%] [  3%] [  3%] [  3%] Built target tf2_msgs_generate_messages_lisp
Built target tf2_msgs_generate_messages_cpp
Built target diagnostic_msgs_generate_messages_lisp
Built target nodelet_generate_messages_py
Built target nodelet_generate_messages_lisp
[  3%] [  3%] Built target dynamic_reconfigure_generate_messages_cpp
Built target diagnostic_msgs_generate_messages_py
[  3%] Built target bond_generate_messages_py
[  3%] [  3%] Built target dynamic_reconfigure_gencfg
Built target bond_generate_messages_lisp
[  3%] [  7%] Built target dynamic_reconfigure_generate_messages_py
Built target velodyne_pointcloud_gencfg
[  7%] Built target dynamic_reconfigure_generate_messages_lisp
[ 13%] Built target velodyne_msgs_generate_messages_py
[ 19%] [ 19%] Built target video_stream
Built target velodyne_msgs_generate_messages_lisp
[ 23%] Built target velodyne_msgs_generate_messages_cpp
[ 23%] Built target velodyne_msgs_generate_messages
[ 25%] Built target velodyne_input
[ 33%] [ 33%] Built target driver_nodelet
Built target velodyne_node
[ 37%] Built target velodyne_rawdata
[ 41%] Built target ringcolors_node
[ 45%] Built target ringcolors_nodelet
Scanning dependencies of target coloring
Scanning dependencies of target calibration
Scanning dependencies of target butveloodom
[ 49%] Built target cloud_node
[ 56%] [ 56%] Built target cloud_nodelet
Built target transform_node
[ 60%] Built target transform_nodelet
[ 62%] [ 66%] [ 66%] [ 68%] Building CXX object but_velodyne/but_velodyne_odom/CMakeFiles/butveloodom.dir/src/but_velodyne_lib/collar_line_odom.cpp.o
[ 74%] Built target butvelo
Building CXX object but_velodyne/but_calibration_camera_velodyne/CMakeFiles/coloring.dir/src/coloring-node.cpp.o
Building CXX object but_velodyne/but_calibration_camera_velodyne/CMakeFiles/coloring.dir/src/Velodyne.cpp.o
Building CXX object but_velodyne/but_calibration_camera_velodyne/CMakeFiles/coloring.dir/src/Image.cpp.o
[ 76%] Building CXX object but_velodyne/but_calibration_camera_velodyne/CMakeFiles/calibration.dir/src/calibration-node.cpp.o
[ 78%] Built target butvelo_groundmap_nodelet
[ 80%] Building CXX object but_velodyne/but_calibration_camera_velodyne/CMakeFiles/calibration.dir/src/Image.cpp.o
[ 82%] [ 84%] Built target butvelo_laserscan_nodelet
Built target butvelo_cloudassembler_nodelet
[ 88%] [ 88%] Built target cloud_assembler
Built target ground_map
[ 90%] Building CXX object but_velodyne/but_calibration_camera_velodyne/CMakeFiles/calibration.dir/src/Velodyne.cpp.o
[ 92%] Built target laser_scan
[ 94%] Building CXX object but_velodyne/but_calibration_camera_velodyne/CMakeFiles/calibration.dir/src/Similarity.cpp.o
[ 96%] Building CXX object but_velodyne/but_calibration_camera_velodyne/CMakeFiles/calibration.dir/src/Calibration3DMarker.cpp.o
In file included from /usr/include/c++/4.8/backward/strstream:51:0,
                 from /usr/include/vtk-5.8/vtkIOStream.h:112,
                 from /usr/include/vtk-5.8/vtkSystemIncludes.h:40,
                 from /usr/include/vtk-5.8/vtkIndent.h:24,
                 from /usr/include/vtk-5.8/vtkObjectBase.h:43,
                 from /usr/include/vtk-5.8/vtkSmartPointerBase.h:26,
                 from /usr/include/vtk-5.8/vtkSmartPointer.h:23,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_geometry_handlers.h:48,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_handlers.h:41,
                 from /usr/include/pcl-1.7/pcl/visualization/common/actor_map.h:40,
                 from /usr/include/pcl-1.7/pcl/visualization/pcl_visualizer.h:48,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_calibration_camera_velodyne/include/but_calibration_camera_velodyne/Velodyne.h:19,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_calibration_camera_velodyne/src/Velodyne.cpp:11:
/usr/include/c++/4.8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
 #warning \
  ^
In file included from /usr/include/c++/4.8/backward/strstream:51:0,
                 from /usr/include/vtk-5.8/vtkIOStream.h:112,
                 from /usr/include/vtk-5.8/vtkSystemIncludes.h:40,
                 from /usr/include/vtk-5.8/vtkIndent.h:24,
                 from /usr/include/vtk-5.8/vtkObjectBase.h:43,
                 from /usr/include/vtk-5.8/vtkSmartPointerBase.h:26,
                 from /usr/include/vtk-5.8/vtkSmartPointer.h:23,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_geometry_handlers.h:48,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_handlers.h:41,
                 from /usr/include/pcl-1.7/pcl/visualization/common/actor_map.h:40,
                 from /usr/include/pcl-1.7/pcl/visualization/pcl_visualizer.h:48,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_calibration_camera_velodyne/include/but_calibration_camera_velodyne/Velodyne.h:19,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_calibration_camera_velodyne/src/Velodyne.cpp:11:
/usr/include/c++/4.8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
 #warning \
  ^
In file included from /usr/include/c++/4.8/backward/strstream:51:0,
                 from /usr/include/vtk-5.8/vtkIOStream.h:112,
                 from /usr/include/vtk-5.8/vtkSystemIncludes.h:40,
                 from /usr/include/vtk-5.8/vtkIndent.h:24,
                 from /usr/include/vtk-5.8/vtkObjectBase.h:43,
                 from /usr/include/vtk-5.8/vtkSmartPointerBase.h:26,
                 from /usr/include/vtk-5.8/vtkSmartPointer.h:23,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_geometry_handlers.h:48,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_handlers.h:41,
                 from /usr/include/pcl-1.7/pcl/visualization/common/actor_map.h:40,
                 from /usr/include/pcl-1.7/pcl/visualization/pcl_visualizer.h:48,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_calibration_camera_velodyne/include/but_calibration_camera_velodyne/Velodyne.h:19,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_calibration_camera_velodyne/src/coloring-node.cpp:32:
/usr/include/c++/4.8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
 #warning \
  ^
In file included from /usr/include/c++/4.8/backward/strstream:51:0,
                 from /usr/include/vtk-5.8/vtkIOStream.h:112,
                 from /usr/include/vtk-5.8/vtkSystemIncludes.h:40,
                 from /usr/include/vtk-5.8/vtkIndent.h:24,
                 from /usr/include/vtk-5.8/vtkObjectBase.h:43,
                 from /usr/include/vtk-5.8/vtkSmartPointerBase.h:26,
                 from /usr/include/vtk-5.8/vtkSmartPointer.h:23,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_geometry_handlers.h:48,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_handlers.h:41,
                 from /usr/include/pcl-1.7/pcl/visualization/common/actor_map.h:40,
                 from /usr/include/pcl-1.7/pcl/visualization/pcl_visualizer.h:48,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_calibration_camera_velodyne/include/but_calibration_camera_velodyne/Velodyne.h:19,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_calibration_camera_velodyne/include/but_calibration_camera_velodyne/Similarity.h:25,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_calibration_camera_velodyne/src/Similarity.cpp:8:
/usr/include/c++/4.8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
 #warning \
  ^
In file included from /usr/include/c++/4.8/backward/strstream:51:0,
                 from /usr/include/vtk-5.8/vtkIOStream.h:112,
                 from /usr/include/vtk-5.8/vtkSystemIncludes.h:40,
                 from /usr/include/vtk-5.8/vtkIndent.h:24,
                 from /usr/include/vtk-5.8/vtkObjectBase.h:43,
                 from /usr/include/vtk-5.8/vtkSmartPointerBase.h:26,
                 from /usr/include/vtk-5.8/vtkSmartPointer.h:23,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_geometry_handlers.h:48,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_handlers.h:41,
                 from /usr/include/pcl-1.7/pcl/visualization/common/actor_map.h:40,
                 from /usr/include/pcl-1.7/pcl/visualization/pcl_visualizer.h:48,
                 from /usr/include/pcl-1.7/pcl/visualization/cloud_viewer.h:39,
                 from /usr/local/include/but_velodyne-0.1/but_velodyne/Visualizer3D.h:33,
                 from /usr/local/include/but_velodyne-0.1/but_velodyne/CollarLinesRegistrationPipeline.h:39,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_velodyne_odom/include/but_velodyne_odom/collar_line_odom.h:33,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_velodyne_odom/src/but_velodyne_lib/collar_line_odom.cpp:26:
/usr/include/c++/4.8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
 #warning \
  ^
In file included from /usr/include/c++/4.8/backward/strstream:51:0,
                 from /usr/include/vtk-5.8/vtkIOStream.h:112,
                 from /usr/include/vtk-5.8/vtkSystemIncludes.h:40,
                 from /usr/include/vtk-5.8/vtkIndent.h:24,
                 from /usr/include/vtk-5.8/vtkObjectBase.h:43,
                 from /usr/include/vtk-5.8/vtkSmartPointerBase.h:26,
                 from /usr/include/vtk-5.8/vtkSmartPointer.h:23,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_geometry_handlers.h:48,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_handlers.h:41,
                 from /usr/include/pcl-1.7/pcl/visualization/common/actor_map.h:40,
                 from /usr/include/pcl-1.7/pcl/visualization/pcl_visualizer.h:48,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_calibration_camera_velodyne/include/but_calibration_camera_velodyne/Velodyne.h:19,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_calibration_camera_velodyne/src/calibration-node.cpp:28:
/usr/include/c++/4.8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
 #warning \
  ^
In file included from /usr/include/c++/4.8/backward/strstream:51:0,
                 from /usr/include/vtk-5.8/vtkIOStream.h:112,
                 from /usr/include/vtk-5.8/vtkSystemIncludes.h:40,
                 from /usr/include/vtk-5.8/vtkIndent.h:24,
                 from /usr/include/vtk-5.8/vtkObjectBase.h:43,
                 from /usr/include/vtk-5.8/vtkSmartPointerBase.h:26,
                 from /usr/include/vtk-5.8/vtkSmartPointer.h:23,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_geometry_handlers.h:48,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_handlers.h:41,
                 from /usr/include/pcl-1.7/pcl/visualization/common/actor_map.h:40,
                 from /usr/include/pcl-1.7/pcl/visualization/pcl_visualizer.h:48,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_calibration_camera_velodyne/include/but_calibration_camera_velodyne/Velodyne.h:19,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_calibration_camera_velodyne/include/but_calibration_camera_velodyne/Calibration3DMarker.h:26,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_calibration_camera_velodyne/src/Calibration3DMarker.cpp:8:
/usr/include/c++/4.8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
 #warning \
  ^
Linking CXX shared library /home/eaz/catkin_ws/devel/lib/libbutveloodom.so
[ 96%] Built target butveloodom
Scanning dependencies of target collar_line_odom
Scanning dependencies of target butvelo_collar_line_odom_nodelet
[ 98%] [100%] Building CXX object but_velodyne/but_velodyne_odom/CMakeFiles/collar_line_odom.dir/src/collar_line_odom_node.cpp.o
Building CXX object but_velodyne/but_velodyne_odom/CMakeFiles/butvelo_collar_line_odom_nodelet.dir/src/collar_line_odom_nodelet.cpp.o
In file included from /usr/include/c++/4.8/backward/strstream:51:0,
                 from /usr/include/vtk-5.8/vtkIOStream.h:112,
                 from /usr/include/vtk-5.8/vtkSystemIncludes.h:40,
                 from /usr/include/vtk-5.8/vtkIndent.h:24,
                 from /usr/include/vtk-5.8/vtkObjectBase.h:43,
                 from /usr/include/vtk-5.8/vtkSmartPointerBase.h:26,
                 from /usr/include/vtk-5.8/vtkSmartPointer.h:23,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_geometry_handlers.h:48,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_handlers.h:41,
                 from /usr/include/pcl-1.7/pcl/visualization/common/actor_map.h:40,
                 from /usr/include/pcl-1.7/pcl/visualization/pcl_visualizer.h:48,
                 from /usr/include/pcl-1.7/pcl/visualization/cloud_viewer.h:39,
                 from /usr/local/include/but_velodyne-0.1/but_velodyne/Visualizer3D.h:33,
                 from /usr/local/include/but_velodyne-0.1/but_velodyne/CollarLinesRegistrationPipeline.h:39,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_velodyne_odom/include/but_velodyne_odom/collar_line_odom.h:33,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_velodyne_odom/src/collar_line_odom_node.cpp:27:
/usr/include/c++/4.8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
 #warning \
  ^
In file included from /usr/include/c++/4.8/backward/strstream:51:0,
                 from /usr/include/vtk-5.8/vtkIOStream.h:112,
                 from /usr/include/vtk-5.8/vtkSystemIncludes.h:40,
                 from /usr/include/vtk-5.8/vtkIndent.h:24,
                 from /usr/include/vtk-5.8/vtkObjectBase.h:43,
                 from /usr/include/vtk-5.8/vtkSmartPointerBase.h:26,
                 from /usr/include/vtk-5.8/vtkSmartPointer.h:23,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_geometry_handlers.h:48,
                 from /usr/include/pcl-1.7/pcl/visualization/point_cloud_handlers.h:41,
                 from /usr/include/pcl-1.7/pcl/visualization/common/actor_map.h:40,
                 from /usr/include/pcl-1.7/pcl/visualization/pcl_visualizer.h:48,
                 from /usr/include/pcl-1.7/pcl/visualization/cloud_viewer.h:39,
                 from /usr/local/include/but_velodyne-0.1/but_velodyne/Visualizer3D.h:33,
                 from /usr/local/include/but_velodyne-0.1/but_velodyne/CollarLinesRegistrationPipeline.h:39,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_velodyne_odom/include/but_velodyne_odom/collar_line_odom.h:33,
                 from /home/eaz/catkin_ws/src/but_velodyne/but_velodyne_odom/src/collar_line_odom_nodelet.cpp:27:
/usr/include/c++/4.8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
 #warning \
  ^
Linking CXX executable /home/eaz/catkin_ws/devel/lib/but_calibration_camera_velodyne/coloring
[100%] Built target coloring
Linking CXX executable /home/eaz/catkin_ws/devel/lib/but_calibration_camera_velodyne/calibration
Linking CXX executable /home/eaz/catkin_ws/devel/lib/but_velodyne_odom/collar_line_odom
[100%] Built target calibration
Linking CXX shared library /home/eaz/catkin_ws/devel/lib/libbutvelo_collar_line_odom_nodelet.so
/usr/local/lib/libbut_velodyne.so: undefined reference to `pcl::search::KdTree<pcl::PointXYZ>::KdTree(bool)'
collect2: error: ld returned 1 exit status
make[2]: *** [/home/eaz/catkin_ws/devel/lib/but_velodyne_odom/collar_line_odom] Error 1
make[1]: *** [but_velodyne/but_velodyne_odom/CMakeFiles/collar_line_odom.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
[100%] Built target butvelo_collar_line_odom_nodelet
make: *** [all] Error 2
Invoking "make -j8 -l8" failed

I think the problem lies in the complications of PCL1.8 and PCL1.7 both being installed, but as mentioned, uninstalling 1.7 seems to be no option.

@martin-velas
Copy link
Contributor

Currently I'm using Ubuntu 16.04 with ROS Indigo and PCL 1.8.0 where C++11 works just fine. Using both PCL 1.7 as ROS dependency and 1.8 installed from source can be quite tricky. Unfortunately I have no quick solution for you.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@martin-velas @emilaz