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AmpliconGenerator throws an std::out_of_range error if a primer range is outside reference sequence length #13

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Krannich479 opened this issue Oct 5, 2023 · 0 comments
Open

AmpliconGenerator throws an std::out_of_range error if a primer range is outside reference sequence length #13

Krannich479 opened this issue Oct 5, 2023 · 0 comments
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@Krannich479
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enhancement New feature or request
Milestone
v0.3.0

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@Krannich479
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Situation:

If a primer region e.g.

MyRef    23000    23031    my_primer_name    1    +    ACCAGCGATCGACGGAGCTAGATCGATCGAT

comes after a reference seq length, e.g. 5000, amplisim aborts with a runtime error from the compiler.

Todo:

Catch this case and improve error handling.
@Krannich479 Krannich479 added the enhancement New feature or request label Oct 5, 2023
@Krannich479 Krannich479 self-assigned this Oct 5, 2023
@Krannich479 Krannich479 added this to the v0.3.0 milestone Mar 7, 2024
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