DESCRIPTION

Package: metabonaut
Title: Exploring and Analyzing LC-MS Data
Version: 0.0.6
Authors@R:
    c(person(given = "Philippine", family = "Louail",
            email = "philippine.louail@eurac.edu",
            role = c("aut", "cre"),
            comment = "ORCID: 0009-0007-5429-6846"),
     person(given = "Anna", family = "Tagliaferri",
            email = "Anna.Tagliaferri@student.unibz.it",
            role = "ctb",
            comment = "ORCID: 0009-0001-4044-4285"),
     person(given = "Vinicius", family = "Verri Hernandes",
            email = "vinicius.verri.hernandes@univie.ac.at",
            role = "ctb",
            comment = "ORCID: 0000-0002-3057-6460"),
     person(given = "Daniel", family = "Marques de Sá e Silva",
            role = "ctb",
            comment = "ORCID: 0000-0002-9674-042X"),
     person(given = "Johannes", family = "Rainer",
            email = "Johannes.Rainer@eurac.edu",
            role = "aut",
            comment = "ORCID: 0000-0002-6977-7147"))
Description: This resource hosts tutorials and end-to-end workflows
             describing how to analyze LC-MS/MS data, from raw files
             to annotation, using Bioconductor packages.
License: Artistic-2.0
Encoding: UTF-8
LazyData: false
Roxygen: list(markdown = TRUE)
Depends:
    R (>= 4.3),
    BiocParallel (>= 1.8.0)
Suggests:
    alabaster.se,
    MsCoreUtils,
    xcms (>= 4.3.4),
    Spectra (>= 1.11.10),
    MsExperiment,
    MsIO (>= 0.0.8),
    MsBackendMetaboLights,
    readxl,
    limma,
    matrixStats,
    pander,
    ggfortify,
    gridExtra,
    AnnotationHub,
    CompoundDb,
    MetaboAnnotation,
    vioplot,
    MetaboCoreUtils,
    BiocStyle,
    rmarkdown,
    RColorBrewer,
    SummarizedExperiment,
    pheatmap,
    knitr,
    quarto
Remotes:
    sneumann/xcms,
    RforMassSpectrometry/MsIO
URL: https://github.com/rformassspectrometry/metabonaut/, https://rformassspectrometry.github.io/metabonaut/
BugReports: https://github.com/rformassspectrometry/metabonaut/issues/new
BiocType: Workflow
RoxygenNote: 7.3.2
VignetteBuilder: quarto
SystemRequirements: pandoc