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Feature request: include functionality for spike-ins #148

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cvanderaa opened this issue Jul 30, 2021 · 0 comments
Open
3 tasks

Feature request: include functionality for spike-ins #148

cvanderaa opened this issue Jul 30, 2021 · 0 comments

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@cvanderaa
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As requested by the Slavov lab:

  • Start using spike in peptides for QC, see SCoPE2 section in DO-MS (?could not find section in article?).
  • We should keep track of the peptides sequence of the spike-ins and their expected ratios. Implement a getSpikeIns() accessors (cf altExp in SingleCellExperiment).
  • Loading control + spiked-in in different amounts in different samples.
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@cvanderaa