refgenieserver.postman_collection.json

{
	"info": {
		"_postman_id": "100f4ef0-cb8a-47b4-8e49-e02f2789e0ca",
		"name": "refgenieserver",
		"schema": "https://schema.getpostman.com/json/collection/v2.1.0/collection.json"
	},
	"item": [
		{
			"name": "get_all_genomes",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"const jsonData = pm.response.json();",
							"pm.test(\"Test data type of the response\", () => {",
							"  pm.expect(jsonData).to.be.an(\"array\");",
							"});"
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/genomes/list",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"genomes",
						"list"
					]
				}
			},
			"response": []
		},
		{
			"name": "get_genomes_by_asset",
			"event": [
				{
					"listen": "prerequest",
					"script": {
						"exec": [
							"pm.environment.set(\"asset\", \"fasta\");"
						],
						"type": "text/javascript"
					}
				},
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});"
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/genomes/by_asset/{{asset}}",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"genomes",
						"by_asset",
						"{{asset}}"
					]
				}
			},
			"response": []
		},
		{
			"name": "get_genome_alias_digest",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"var textData = pm.response.text();",
							"pm.test(\"Test data type of the response\", () => {",
							"  pm.expect(textData).to.be.a(\"string\");",
							"});",
							"pm.variables.set(\"genomeDigest\", textData)",
							""
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/genomes/genome_digest/{{genome}}",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"genomes",
						"genome_digest",
						"{{genome}}"
					]
				}
			},
			"response": []
		},
		{
			"name": "get_genome_alias",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"",
							"var jsonData = pm.response.json();",
							"pm.test(\"Test data type of the response\", () => {",
							"  pm.expect(jsonData).to.be.an(\"array\");",
							"});",
							"",
							"pm.test(\"Test data value\", () => {",
							"  var testVal = pm.variables.get(\"genome\")",
							"  pm.expect(jsonData[0]).to.equal(testVal);",
							"});"
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/genomes/aliases/{{genomeDigest}}",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"genomes",
						"aliases",
						"{{genomeDigest}}"
					]
				}
			},
			"response": []
		},
		{
			"name": "get_genome_attributes",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"var jsonData = pm.response.json();",
							"pm.test(\"Test data type of the response\", () => {",
							"  pm.expect(jsonData).to.be.a(\"object\");",
							"});",
							"",
							"pm.test(\"Test data value type\", () => {",
							"  pm.expect(jsonData[\"genome_description\"]).to.be.a(\"string\");",
							"});",
							"",
							"",
							""
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/genomes/attrs/{{genomeDigest}}",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"genomes",
						"attrs",
						"{{genomeDigest}}"
					]
				}
			},
			"response": []
		},
		{
			"name": "get_genomes_by_asset",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"var jsonData = pm.response.json();",
							"pm.test(\"Test data type of the response\", () => {",
							"  pm.expect(jsonData).to.be.a(\"array\");",
							"});",
							"",
							"var genome = pm.variables.get(\"genome\")",
							"pm.test(\"Test data includes genome\", () => {",
							"  pm.expect(jsonData).to.include(genome);",
							"});",
							"",
							"",
							""
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/genomes/by_asset/{{asset}}",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"genomes",
						"by_asset",
						"{{asset}}"
					]
				}
			},
			"response": []
		},
		{
			"name": "get_all_assets",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"const jsonData = pm.response.json();",
							"pm.test(\"Test data type of the response\", () => {",
							"  pm.expect(jsonData).to.be.an(\"object\");",
							"});",
							"",
							"var genome = pm.variables.get(\"genomeDigest\")",
							"pm.test(\"Test data includes genome\", () => {",
							"  pm.expect(jsonData).haveOwnProperty(genome);",
							"});",
							"pm.test(\"Test data type\", () => {",
							"  pm.expect(jsonData[genome]).to.be.an(\"array\");",
							"});",
							""
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/assets/list",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"assets",
						"list"
					]
				}
			},
			"response": []
		},
		{
			"name": "get_asset_default_tag",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"var textData = pm.response.text();",
							"pm.test(\"Test data type of the response\", () => {",
							"  pm.expect(textData).to.be.a(\"string\");",
							"});",
							"pm.variables.set(\"defaultTag\", textData)"
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/assets/default_tag/{{genomeDigest}}/{{asset}}",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"assets",
						"default_tag",
						"{{genomeDigest}}",
						"{{asset}}"
					]
				}
			},
			"response": []
		},
		{
			"name": "get_assset_digest",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"var textData = pm.response.text();",
							"pm.test(\"Test data type of the response\", () => {",
							"  pm.expect(textData).to.be.a(\"string\");",
							"});",
							"pm.variables.set(\"assetDigest\", textData)"
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/assets/asset_digest/{{genomeDigest}}/{{asset}}?tag={{defaultTag}}",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"assets",
						"asset_digest",
						"{{genomeDigest}}",
						"{{asset}}"
					],
					"query": [
						{
							"key": "tag",
							"value": "{{defaultTag}}"
						}
					]
				}
			},
			"response": []
		},
		{
			"name": "get_asset_archive_digest",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"var textData = pm.response.text();",
							"pm.test(\"Test data type of the response\", () => {",
							"  pm.expect(textData).to.be.a(\"string\");",
							"});",
							"pm.variables.set(\"archiveDigest\", textData)"
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/assets/archive_digest/{{genomeDigest}}/{{asset}}?tag={{defaultTag}}",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"assets",
						"archive_digest",
						"{{genomeDigest}}",
						"{{asset}}"
					],
					"query": [
						{
							"key": "tag",
							"value": "{{defaultTag}}"
						}
					]
				}
			},
			"response": []
		},
		{
			"name": "get_asset_digest",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"var textData = pm.response.text();",
							"pm.test(\"Test data type of the response\", () => {",
							"  pm.expect(textData).to.be.a(\"string\");",
							"});",
							"pm.variables.set(\"assetDigest\", textData)"
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/assets/asset_digest/{{genomeDigest}}/{{asset}}?tag={{defaultTag}}",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"assets",
						"asset_digest",
						"{{genomeDigest}}",
						"{{asset}}"
					],
					"query": [
						{
							"key": "tag",
							"value": "{{defaultTag}}"
						}
					]
				}
			},
			"response": []
		},
		{
			"name": "get_asset_attributes",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"var jsonData = pm.response.json();",
							"pm.test(\"Test data type of the response\", () => {",
							"  pm.expect(jsonData).to.be.a(\"object\");",
							"});",
							"",
							"pm.test(\"Test data value\", () => {",
							"  var archiveDigest = pm.variables.get(\"archiveDigest\", jsonData)",
							"  var assetDigest = pm.variables.get(\"assetDigest\", jsonData)",
							"  pm.expect(jsonData[\"asset_digest\"]).to.equal(assetDigest);",
							"  pm.expect(jsonData[\"archive_digest\"]).to.equal(archiveDigest);",
							"});",
							"",
							"",
							""
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/assets/attrs/{{genomeDigest}}/{{asset}}?tag={{defaultTag}}",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"assets",
						"attrs",
						"{{genomeDigest}}",
						"{{asset}}"
					],
					"query": [
						{
							"key": "tag",
							"value": "{{defaultTag}}"
						}
					]
				}
			},
			"response": []
		},
		{
			"name": "get_asset_archive",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"pm.test(\"Content-Type is present\", function () {",
							"    pm.response.to.have.header(\"Content-Type\");",
							"});"
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/assets/archive/{{genomeDigest}}/{{asset}}?tag={{defaultTag}}",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"assets",
						"archive",
						"{{genomeDigest}}",
						"{{asset}}"
					],
					"query": [
						{
							"key": "tag",
							"value": "{{defaultTag}}"
						}
					]
				}
			},
			"response": []
		},
		{
			"name": "get_asset_log",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"pm.test(\"Content-Type is present\", function () {",
							"    pm.response.to.have.header(\"Content-Type\");",
							"});"
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/assets/log/{{genomeDigest}}/{{asset}}?tag={{defaultTag}}",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"assets",
						"log",
						"{{genomeDigest}}",
						"{{asset}}"
					],
					"query": [
						{
							"key": "tag",
							"value": "{{defaultTag}}"
						}
					]
				}
			},
			"response": []
		},
		{
			"name": "get_asset_recipe",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"pm.test(\"Content-Type is present\", function () {",
							"    pm.response.to.have.header(\"Content-Type\");",
							"});"
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/assets/recipe/{{genomeDigest}}/{{asset}}?tag={{defaultTag}}",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"assets",
						"recipe",
						"{{genomeDigest}}",
						"{{asset}}"
					],
					"query": [
						{
							"key": "tag",
							"value": "{{defaultTag}}"
						}
					]
				}
			},
			"response": []
		},
		{
			"name": "get_dir_contents",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"pm.test(\"Content-Type is present\", function () {",
							"    pm.response.to.have.header(\"Content-Type\");",
							"});",
							"pm.test(\"JSON is an array of strings\", function () {",
							"    var jsonData = pm.response.json();",
							"    pm.expect(jsonData).to.be.an(\"array\");",
							"    jsonData.forEach(item => pm.expect(item).to.be.a(\"string\"));",
							"});",
							""
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/assets/dir_contents/{{genomeDigest}}/{{asset}}?tag={{defaultTag}}",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"assets",
						"dir_contents",
						"{{genomeDigest}}",
						"{{asset}}"
					],
					"query": [
						{
							"key": "tag",
							"value": "{{defaultTag}}"
						}
					]
				}
			},
			"response": []
		},
		{
			"name": "get_alias_dict",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"var jsonData = pm.response.json();",
							"var genomeDigest = pm.variables.get(\"genomeDigest\")",
							"var genome = pm.variables.get(\"genome\")",
							"",
							"pm.test(\"Test data type of the response\", () => {",
							"  pm.expect(jsonData).to.be.a(\"object\");",
							"});",
							"",
							"pm.test(\"Test data includes: \" + genomeDigest, () => {",
							"  pm.expect(jsonData).haveOwnProperty(genomeDigest);",
							"});",
							"",
							"pm.test(\"Test data value\", () => {",
							"  pm.expect(jsonData[genomeDigest]).to.include(genome);",
							"});",
							""
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/genomes/alias_dict",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"genomes",
						"alias_dict"
					]
				}
			},
			"response": []
		},
		{
			"name": "get_remotes_dict",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"var jsonData = pm.response.json();",
							"pm.test(\"Test data type of the response\", () => {",
							"  pm.expect(jsonData).to.be.a(\"object\");",
							"});",
							"",
							"var remoteClasses = Object.keys(jsonData);",
							"",
							"pm.variables.set(\"retemoteClasses\", remoteClasses);",
							"pm.variables.set(\"firstRetemoteClass\", remoteClasses[1]);",
							"",
							"console.log(\"Determined remote classes: \", remoteClasses);",
							"",
							"for (const remoteClass of remoteClasses){",
							"    pm.test(\"Test data value content of: \" + remoteClass, () => {",
							"        pm.expect(jsonData[remoteClass]).haveOwnProperty(\"prefix\");",
							"        pm.expect(jsonData[remoteClass][\"prefix\"]).to.be.a(\"string\");",
							"    });",
							"}",
							"",
							"",
							"",
							""
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/remotes/dict",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"remotes",
						"dict"
					]
				}
			},
			"response": []
		},
		{
			"name": "get_asset_file_path",
			"event": [
				{
					"listen": "test",
					"script": {
						"exec": [
							"pm.test(\"Status code is 200\", function () {",
							"    pm.response.to.have.status(200);",
							"});",
							"var textData = pm.response.text();",
							"pm.test(\"Test data type of the response\", () => {",
							"  pm.expect(textData).to.be.a(\"string\");",
							"});",
							""
						],
						"type": "text/javascript"
					}
				}
			],
			"request": {
				"method": "GET",
				"header": [],
				"url": {
					"raw": "http://{{urlBase}}/assets/file_path/{{genomeDigest}}/{{asset}}/{{asset}}?remoteClass={{firstRetemoteClass}}",
					"protocol": "http",
					"host": [
						"{{urlBase}}"
					],
					"path": [
						"assets",
						"file_path",
						"{{genomeDigest}}",
						"{{asset}}",
						"{{asset}}"
					],
					"query": [
						{
							"key": "remoteClass",
							"value": "{{firstRetemoteClass}}"
						}
					]
				}
			},
			"response": []
		}
	]
}