From 648309530bf5dc351d63552b5ceb54277b73193e Mon Sep 17 00:00:00 2001 From: Luigi Ranghetti <6874239+ranghetti@users.noreply.github.com> Date: Mon, 11 Feb 2019 15:55:26 +0100 Subject: [PATCH] Devel (#150) * Change site URL * Restore v8-3.14 on ArchLinux (package v8 fails to build) --- DESCRIPTION | 2 +- R/s2_gui.R | 6 ++--- R/zzz.R | 2 +- README.Rmd | 32 +++++++++++------------ README.md | 28 ++++++++++---------- docs/articles/installation.html | 4 +-- docs/authors.html | 4 +-- docs/index.html | 4 +-- index.Rmd | 4 +-- index.md | 4 +-- inst/CITATION | 4 +-- inst/extdata/code/create_README.sh | 4 +-- inst/logs/190130104033_s2_translate.txt | 4 +++ inst/logs/190130105135_s2_calcindices.txt | 1 + inst/logs/190130161207_s2download.txt | 2 ++ inst/logs/190208152347_gdal_warp.txt | 3 +++ inst/logs/190208152944_s2_mask.txt | 6 +++++ vignettes/installation.Rmd | 4 +-- 18 files changed, 67 insertions(+), 51 deletions(-) create mode 100644 inst/logs/190130104033_s2_translate.txt create mode 100644 inst/logs/190130105135_s2_calcindices.txt create mode 100644 inst/logs/190130161207_s2download.txt create mode 100644 inst/logs/190208152347_gdal_warp.txt create mode 100644 inst/logs/190208152944_s2_mask.txt diff --git a/DESCRIPTION b/DESCRIPTION index d3e63062..a3b71be2 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -14,7 +14,7 @@ Description: This package contains useful functions to preprocess Sentinel-2 ima This package is under construction. License: GPL-3 + file LICENSE Encoding: UTF-8 -URL: https://ranghetti.github.io/sen2r, https://github.com/ranghetti/sen2r +URL: http://sen2r.ranghetti.info, https://github.com/ranghetti/sen2r BugReports: https://github.com/ranghetti/sen2r/issues Imports: reticulate, diff --git a/R/s2_gui.R b/R/s2_gui.R index 3cc11b30..65963b8a 100644 --- a/R/s2_gui.R +++ b/R/s2_gui.R @@ -69,7 +69,7 @@ s2_gui <- function(param_list = NULL, div( style = "text-align:center;padding-top:17px;padding-bottom:30px;", a( - href='https://ranghetti.github.io/sen2r', + href='http://sen2r.ranghetti.info', target = "_blank", uiOutput("img_logo") ) @@ -186,8 +186,8 @@ s2_gui <- function(param_list = NULL, "open_github_doc", label = "\u2000Open documentation", icon = icon("info-circle"), - onclick ="window.open('https://ranghetti.github.io/sen2r', '_blank')", - # onclick ="window.open('https://ranghetti.github.io/sen2r/articles/sen2r_gui.html', '_blank')", + onclick ="window.open('http://sen2r.ranghetti.info', '_blank')", + # onclick ="window.open('http://sen2r.ranghetti.info/articles/sen2r_gui.html', '_blank')", class = "darkbutton" ) ) diff --git a/R/zzz.R b/R/zzz.R index 3fa82a03..e6e2d955 100644 --- a/R/zzz.R +++ b/R/zzz.R @@ -2,7 +2,7 @@ packageStartupMessage(paste( "Welcome to sen2r. To use the package from a GUI, launch", " > sen2r()", - "Documentation: https://ranghetti.github.io/sen2r", + "Documentation: http://sen2r.ranghetti.info", if (Sys.info()["sysname"] == "Windows") { paste( "\nIMPORTANT: sen2r depends on some external tools;", diff --git a/README.Rmd b/README.Rmd index 4f40566d..84123e5c 100644 --- a/README.Rmd +++ b/README.Rmd @@ -77,13 +77,13 @@ remotes::install_github("ranghetti/sen2r") ``` For detailed instructions about installing the package (including dependencies), -see the [Installation](https://ranghetti.github.io/sen2r/articles/installation.html) page. +see the [Installation](http://sen2r.ranghetti.info/articles/installation.html) page. ### Run as Docker image A dockerised version of sen2r is available [here](https://cloud.docker.com/repository/docker/ranghetti/sen2r). -For detailed instructions about using it, see the page ["Run in a Docker container"](https://ranghetti.github.io/sen2r/articles/docker.html) page. +For detailed instructions about using it, see the page ["Run in a Docker container"](http://sen2r.ranghetti.info/articles/docker.html) page. ## Usage @@ -118,35 +118,35 @@ and then launches the main function.

Alternatively, -[`sen2r()`](https://ranghetti.github.io/sen2r/reference/sen2r.html) +[`sen2r()`](http://sen2r.ranghetti.info/reference/sen2r.html) can be launched with a list of parameters (created with -[`s2_gui()`](https://ranghetti.github.io/sen2r/reference/s2_gui.html)) +[`s2_gui()`](http://sen2r.ranghetti.info/reference/s2_gui.html)) or passing manually the parameters as arguments of the function -(see [the documentation of the function](https://ranghetti.github.io/sen2r/reference/sen2r.html) for further details). +(see [the documentation of the function](http://sen2r.ranghetti.info/reference/sen2r.html) for further details). Other specific functions can be used to run single steps separately: -* [`s2_list()`](https://ranghetti.github.io/sen2r/reference/s2_list.html) +* [`s2_list()`](http://sen2r.ranghetti.info/reference/s2_list.html) to retrieve the list of available Sentinel-2 products basing on input parameters; -* [`s2_download()`](https://ranghetti.github.io/sen2r/reference/s2_download.html) +* [`s2_download()`](http://sen2r.ranghetti.info/reference/s2_download.html) to download Sentinel-2 products; * [`sen2cor()`](reference/sen2cor.html) to correct level-1C products using [Sen2Cor](http://step.esa.int/main/third-party-plugins-2/sen2cor); -* [`s2_translate()`](https://ranghetti.github.io/sen2r/reference/s2_translate.html) +* [`s2_translate()`](http://sen2r.ranghetti.info/reference/s2_translate.html) to convert Sentinel-2 products from SAFE format to a format managed by GDAL; -* [`s2_merge()`](https://ranghetti.github.io/sen2r/reference/s2_merge.html) +* [`s2_merge()`](http://sen2r.ranghetti.info/reference/s2_merge.html) to merge Sentinel-2 tiles which have the same date and orbit; -* [`gdal_warp()`](https://ranghetti.github.io/sen2r/reference/gdal_warp.html) +* [`gdal_warp()`](http://sen2r.ranghetti.info/reference/gdal_warp.html) to clip, reproject and warp raster files (this is a wrapper to call [gdal_translate](http://www.gdal.org/gdal_translate.html) or [gdalwarp](http://www.gdal.org/gdalwarp.html) basing on input parameters); -* [`s2_mask()`](https://ranghetti.github.io/sen2r/reference/s2_mask.html) +* [`s2_mask()`](http://sen2r.ranghetti.info/reference/s2_mask.html) to apply a cloud mask to Sentinel-2 products; -* [`s2_rgb()`](https://ranghetti.github.io/sen2r/reference/s2_rgb.html) +* [`s2_rgb()`](http://sen2r.ranghetti.info/reference/s2_rgb.html) to generate RGB images from Sentinel-2 Surface Reflectance multiband raster files; -* [`s2_calcindices()`](https://ranghetti.github.io/sen2r/reference/s2_calcindices.html) +* [`s2_calcindices()`](http://sen2r.ranghetti.info/reference/s2_calcindices.html) to compute maps of spectral indices from Sentinel-2 Surface Reflectance multiband raster files; -* [`s2_thumbnails()`](https://ranghetti.github.io/sen2r/reference/s2_thumbnails.html) +* [`s2_thumbnails()`](http://sen2r.ranghetti.info/reference/s2_thumbnails.html) to generate RGB thumbnails (JPEG or PNG) of the products. ## Credits @@ -165,7 +165,7 @@ The functionalities to search and download SAFE tiles are based on the Python to To cite this library, please use the following entry: -Ranghetti, L.\ and Busetto, L.\ (`r strftime(Sys.Date(),"%Y")`). *sen2r: an R toolbox to find, download and preprocess Sentinel-2 data*. R package version `r packageVersion("sen2r")`. DOI: [10.5281/zenodo.1240384](https://dx.doi.org/10.5281/zenodo.1240384). URL: [https://ranghetti.github.io/sen2r](https://ranghetti.github.io/sen2r). +Ranghetti, L.\ and Busetto, L.\ (`r strftime(Sys.Date(),"%Y")`). *sen2r: an R toolbox to find, download and preprocess Sentinel-2 data*. R package version `r packageVersion("sen2r")`. DOI: [10.5281/zenodo.1240384](https://dx.doi.org/10.5281/zenodo.1240384). URL: [http://sen2r.ranghetti.info](http://sen2r.ranghetti.info). ```bibtex @Manual{sen2r, @@ -174,6 +174,6 @@ Ranghetti, L.\ and Busetto, L.\ (`r strftime(Sys.Date(),"%Y")`). *sen2r: an R to year = {`r strftime(Sys.Date(),"%Y")`}, note = {R package version `r packageVersion("sen2r")`}, doi = {10.5281/zenodo.1240384}, - url = {https://ranghetti.github.io/sen2r}, + url = {http://sen2r.ranghetti.info}, } ``` diff --git a/README.md b/README.md index 305a61dd..dec7645f 100644 --- a/README.md +++ b/README.md @@ -40,13 +40,13 @@ The package can be installed from GitHub with the R package **remotes**: remotes::install_github("ranghetti/sen2r") ``` -For detailed instructions about installing the package (including dependencies), see the [Installation](https://ranghetti.github.io/sen2r/articles/installation.html) page. +For detailed instructions about installing the package (including dependencies), see the [Installation](http://sen2r.ranghetti.info/articles/installation.html) page. ### Run as Docker image A dockerised version of sen2r is available [here](https://cloud.docker.com/repository/docker/ranghetti/sen2r). -For detailed instructions about using it, see the page ["Run in a Docker container"](https://ranghetti.github.io/sen2r/articles/docker.html) page. +For detailed instructions about using it, see the page ["Run in a Docker container"](http://sen2r.ranghetti.info/articles/docker.html) page. Usage ----- @@ -63,20 +63,20 @@ this opens a GUI which allows to set the required processing parameters, and the


-Alternatively, [`sen2r()`](https://ranghetti.github.io/sen2r/reference/sen2r.html) can be launched with a list of parameters (created with [`s2_gui()`](https://ranghetti.github.io/sen2r/reference/s2_gui.html)) or passing manually the parameters as arguments of the function (see [the documentation of the function](https://ranghetti.github.io/sen2r/reference/sen2r.html) for further details). +Alternatively, [`sen2r()`](http://sen2r.ranghetti.info/reference/sen2r.html) can be launched with a list of parameters (created with [`s2_gui()`](http://sen2r.ranghetti.info/reference/s2_gui.html)) or passing manually the parameters as arguments of the function (see [the documentation of the function](http://sen2r.ranghetti.info/reference/sen2r.html) for further details). Other specific functions can be used to run single steps separately: -- [`s2_list()`](https://ranghetti.github.io/sen2r/reference/s2_list.html) to retrieve the list of available Sentinel-2 products basing on input parameters; -- [`s2_download()`](https://ranghetti.github.io/sen2r/reference/s2_download.html) to download Sentinel-2 products; +- [`s2_list()`](http://sen2r.ranghetti.info/reference/s2_list.html) to retrieve the list of available Sentinel-2 products basing on input parameters; +- [`s2_download()`](http://sen2r.ranghetti.info/reference/s2_download.html) to download Sentinel-2 products; - [`sen2cor()`](reference/sen2cor.html) to correct level-1C products using [Sen2Cor](http://step.esa.int/main/third-party-plugins-2/sen2cor); -- [`s2_translate()`](https://ranghetti.github.io/sen2r/reference/s2_translate.html) to convert Sentinel-2 products from SAFE format to a format managed by GDAL; -- [`s2_merge()`](https://ranghetti.github.io/sen2r/reference/s2_merge.html) to merge Sentinel-2 tiles which have the same date and orbit; -- [`gdal_warp()`](https://ranghetti.github.io/sen2r/reference/gdal_warp.html) to clip, reproject and warp raster files (this is a wrapper to call [gdal\_translate](http://www.gdal.org/gdal_translate.html) or [gdalwarp](http://www.gdal.org/gdalwarp.html) basing on input parameters); -- [`s2_mask()`](https://ranghetti.github.io/sen2r/reference/s2_mask.html) to apply a cloud mask to Sentinel-2 products; -- [`s2_rgb()`](https://ranghetti.github.io/sen2r/reference/s2_rgb.html) to generate RGB images from Sentinel-2 Surface Reflectance multiband raster files; -- [`s2_calcindices()`](https://ranghetti.github.io/sen2r/reference/s2_calcindices.html) to compute maps of spectral indices from Sentinel-2 Surface Reflectance multiband raster files; -- [`s2_thumbnails()`](https://ranghetti.github.io/sen2r/reference/s2_thumbnails.html) to generate RGB thumbnails (JPEG or PNG) of the products. +- [`s2_translate()`](http://sen2r.ranghetti.info/reference/s2_translate.html) to convert Sentinel-2 products from SAFE format to a format managed by GDAL; +- [`s2_merge()`](http://sen2r.ranghetti.info/reference/s2_merge.html) to merge Sentinel-2 tiles which have the same date and orbit; +- [`gdal_warp()`](http://sen2r.ranghetti.info/reference/gdal_warp.html) to clip, reproject and warp raster files (this is a wrapper to call [gdal\_translate](http://www.gdal.org/gdal_translate.html) or [gdalwarp](http://www.gdal.org/gdalwarp.html) basing on input parameters); +- [`s2_mask()`](http://sen2r.ranghetti.info/reference/s2_mask.html) to apply a cloud mask to Sentinel-2 products; +- [`s2_rgb()`](http://sen2r.ranghetti.info/reference/s2_rgb.html) to generate RGB images from Sentinel-2 Surface Reflectance multiband raster files; +- [`s2_calcindices()`](http://sen2r.ranghetti.info/reference/s2_calcindices.html) to compute maps of spectral indices from Sentinel-2 Surface Reflectance multiband raster files; +- [`s2_thumbnails()`](http://sen2r.ranghetti.info/reference/s2_thumbnails.html) to generate RGB thumbnails (JPEG or PNG) of the products. Credits ------- @@ -89,7 +89,7 @@ The functionalities to search and download SAFE tiles are based on the Python to To cite this library, please use the following entry: -Ranghetti, L. and Busetto, L. (2019). *sen2r: an R toolbox to find, download and preprocess Sentinel-2 data*. R package version 1.0.0. DOI: [10.5281/zenodo.1240384](https://dx.doi.org/10.5281/zenodo.1240384). URL: . +Ranghetti, L. and Busetto, L. (2019). *sen2r: an R toolbox to find, download and preprocess Sentinel-2 data*. R package version 1.0.0. DOI: [10.5281/zenodo.1240384](https://dx.doi.org/10.5281/zenodo.1240384). URL: . ``` bibtex @Manual{sen2r, @@ -98,6 +98,6 @@ Ranghetti, L. and Busetto, L. (2019). *sen2r: an R toolbox to find, download a year = {2019}, note = {R package version 1.0.0}, doi = {10.5281/zenodo.1240384}, - url = {https://ranghetti.github.io/sen2r}, + url = {http://sen2r.ranghetti.info}, } ``` diff --git a/docs/articles/installation.html b/docs/articles/installation.html index 913c34cf..c78cdefe 100644 --- a/docs/articles/installation.html +++ b/docs/articles/installation.html @@ -142,8 +142,8 @@ 

sudo pacman -S --noconfirm r base-devel gcc-fortran python-gdal wget aria2 jq protobuf git
 cd /tmp; git clone https://aur.archlinux.org/gyp-git.git
 cd gyp-git; makepkg -si --noconfirm
-cd /tmp; git clone https://aur.archlinux.org/v8.git
-cd v8; makepkg -si --noconfirm
+cd /tmp; git clone https://aur.archlinux.org/v8-3.14.git
+cd v8-3.14; makepkg -si --noconfirm
 cd /tmp; git clone https://aur.archlinux.org/udunits.git
 cd udunits; makepkg -si --noconfirm

Installation was tested on date 2018-11-21.

diff --git a/docs/authors.html b/docs/authors.html index 07495460..2b02f568 100644 --- a/docs/authors.html +++ b/docs/authors.html @@ -109,7 +109,7 @@

Citation

Ranghetti L, Busetto L (2019). sen2r: an R toolbox to find, download and preprocess Sentinel-2 data. -doi: 10.5281/zenodo.1240384, R package version 1.0.0, https://ranghetti.github.io/sen2r. +doi: 10.5281/zenodo.1240384, R package version 1.0.0, http://sen2r.ranghetti.info. 

@Manual{,
   author = {Luigi Ranghetti and Lorenzo Busetto},
@@ -117,7 +117,7 @@ 
Citation

   year = {2019},
   note = {R package version 1.0.0},
   doi = {10.5281/zenodo.1240384},
-  url = {https://ranghetti.github.io/sen2r},
+  url = {http://sen2r.ranghetti.info},
 }

Authors

diff --git a/docs/index.html b/docs/index.html index feb54a26..cd74df49 100644 --- a/docs/index.html +++ b/docs/index.html @@ -150,14 +150,14 @@

The sen2r logo, partially derived from the R logo, is released under the Creative Commons Attribution-ShareAlike 4.0 International license (CC-BY-SA 4.0).

The functionalities to search and download SAFE tiles are based on the Python tool Sentinel-download by Olivier Hagolle, released under the GNU General Public License version 2 (GPL‑2).

To cite this library, please use the following entry:

-

Ranghetti, L. and Busetto, L. (2019). sen2r: an R toolbox to find, download and preprocess Sentinel-2 data. R package version 1.0.0. DOI: 10.5281/zenodo.1240384. URL: https://ranghetti.github.io/sen2r.

+

Ranghetti, L. and Busetto, L. (2019). sen2r: an R toolbox to find, download and preprocess Sentinel-2 data. R package version 1.0.0. DOI: 10.5281/zenodo.1240384. URL: http://sen2r.ranghetti.info.

@Manual{sen2r,
   title  = {sen2r: an R toolbox to find, download and preprocess Sentinel-2 data},
   author = {Luigi Ranghetti and Lorenzo Busetto},
   year   = {2019},
   note   = {R package version 1.0.0},
   doi    = {10.5281/zenodo.1240384},
-  url    = {https://ranghetti.github.io/sen2r},
+  url    = {http://sen2r.ranghetti.info},
 }

diff --git a/index.Rmd b/index.Rmd index ae2c3a67..11a4fb5d 100644 --- a/index.Rmd +++ b/index.Rmd @@ -165,7 +165,7 @@ The functionalities to search and download SAFE tiles are based on the Python to To cite this library, please use the following entry: -Ranghetti, L.\ and Busetto, L.\ (`r strftime(Sys.Date(),"%Y")`). *sen2r: an R toolbox to find, download and preprocess Sentinel-2 data*. R package version `r packageVersion("sen2r")`. DOI: [10.5281/zenodo.1240384](https://dx.doi.org/10.5281/zenodo.1240384). URL: [https://ranghetti.github.io/sen2r](https://ranghetti.github.io/sen2r). +Ranghetti, L.\ and Busetto, L.\ (`r strftime(Sys.Date(),"%Y")`). *sen2r: an R toolbox to find, download and preprocess Sentinel-2 data*. R package version `r packageVersion("sen2r")`. DOI: [10.5281/zenodo.1240384](https://dx.doi.org/10.5281/zenodo.1240384). URL: [http://sen2r.ranghetti.info](http://sen2r.ranghetti.info). ```bibtex @Manual{sen2r, @@ -174,6 +174,6 @@ Ranghetti, L.\ and Busetto, L.\ (`r strftime(Sys.Date(),"%Y")`). *sen2r: an R to year = {`r strftime(Sys.Date(),"%Y")`}, note = {R package version `r packageVersion("sen2r")`}, doi = {10.5281/zenodo.1240384}, - url = {https://ranghetti.github.io/sen2r}, + url = {http://sen2r.ranghetti.info}, } ``` diff --git a/index.md b/index.md index 521e475a..d8d56ae5 100644 --- a/index.md +++ b/index.md @@ -89,7 +89,7 @@ The functionalities to search and download SAFE tiles are based on the Python to To cite this library, please use the following entry: -Ranghetti, L. and Busetto, L. (2019). *sen2r: an R toolbox to find, download and preprocess Sentinel-2 data*. R package version 1.0.0. DOI: [10.5281/zenodo.1240384](https://dx.doi.org/10.5281/zenodo.1240384). URL: . +Ranghetti, L. and Busetto, L. (2019). *sen2r: an R toolbox to find, download and preprocess Sentinel-2 data*. R package version 1.0.0. DOI: [10.5281/zenodo.1240384](https://dx.doi.org/10.5281/zenodo.1240384). URL: . ``` bibtex @Manual{sen2r, @@ -98,6 +98,6 @@ Ranghetti, L. and Busetto, L. (2019). *sen2r: an R toolbox to find, download a year = {2019}, note = {R package version 1.0.0}, doi = {10.5281/zenodo.1240384}, - url = {https://ranghetti.github.io/sen2r}, + url = {http://sen2r.ranghetti.info}, } ``` diff --git a/inst/CITATION b/inst/CITATION index 724318b9..f17ffa0d 100644 --- a/inst/CITATION +++ b/inst/CITATION @@ -11,11 +11,11 @@ citEntry( year = "2019", note = "R package version 1.0.0", doi = "10.5281/zenodo.1240384", - url = "https://ranghetti.github.io/sen2r", + url = "http://sen2r.ranghetti.info", textVersion = paste( "L. Ranghetti, L. Busetto (2018).", "sen2r: an R toolbox to find, download and preprocess Sentinel-2 data.", "R package version 0.3.4. DOI: 10.5281/zenodo.1240384.", - "URL: https://ranghetti.github.io/sen2r/." + "URL: http://sen2r.ranghetti.info/." ) ) diff --git a/inst/extdata/code/create_README.sh b/inst/extdata/code/create_README.sh index 50cbb71f..83dd3c46 100755 --- a/inst/extdata/code/create_README.sh +++ b/inst/extdata/code/create_README.sh @@ -2,8 +2,8 @@ # Script used to automatically generate README.Rmd from index.Rmd # (replacing internal links with complete links to the online documentation -# at https://ranghetti.github.io/sen2r) +# at http://sen2r.ranghetti.info) # Launch the script from the main sen2r directory -sed -e "s/](\(.*\)\.md)/](https:\/\/ranghetti.github.io\/sen2r\/\1\.html)/g" index.Rmd > README.Rmd +sed -e "s/](\(.*\)\.md)/](http:\/\/sen2r.ranghetti.info\/\1\.html)/g" index.Rmd > README.Rmd diff --git a/inst/logs/190130104033_s2_translate.txt b/inst/logs/190130104033_s2_translate.txt new file mode 100644 index 00000000..659cae60 --- /dev/null +++ b/inst/logs/190130104033_s2_translate.txt @@ -0,0 +1,4 @@ +/tmp/RtmpoxUxk5/sen2r_3a6323bfb939/group3a631452c63d/tiles/BOA/S2B2A_20180805_065_32TNR_BOA_10.vrt +/tmp/RtmpoxUxk5/sen2r_3a6323bfb939/group3a631452c63d/tiles/BOA/S2B2A_20180805_065_32TNS_BOA_10.vrt +/tmp/RtmpoxUxk5/sen2r_3a6323bfb939/group3a631452c63d/tiles/SCL/S2B2A_20180805_065_32TNR_SCL_10.vrt +/tmp/RtmpoxUxk5/sen2r_3a6323bfb939/group3a631452c63d/tiles/SCL/S2B2A_20180805_065_32TNS_SCL_10.vrt diff --git a/inst/logs/190130105135_s2_calcindices.txt b/inst/logs/190130105135_s2_calcindices.txt new file mode 100644 index 00000000..338a7066 --- /dev/null +++ b/inst/logs/190130105135_s2_calcindices.txt @@ -0,0 +1 @@ +/home/lranghetti/share/git/github/ranghetti/sen2r/inst/extdata/example_files/out/out_test3/MSAVI2/S2B2A_20180805_065_Scalve_MSAVI2_10.tif diff --git a/inst/logs/190130161207_s2download.txt b/inst/logs/190130161207_s2download.txt new file mode 100644 index 00000000..fb1fa7c9 --- /dev/null +++ b/inst/logs/190130161207_s2download.txt @@ -0,0 +1,2 @@ +/mnt/nr_data/rs_data/optical/Sentinel2/L2A/S2A_MSIL2A_20190104T101411_N0211_R022_T32TPR_20190104T125207.SAFE +/mnt/nr_data/rs_data/optical/Sentinel2/L2A/S2A_MSIL2A_20190104T101411_N0211_R022_T32TPR_20190104T125207.SAFE.zip diff --git a/inst/logs/190208152347_gdal_warp.txt b/inst/logs/190208152347_gdal_warp.txt new file mode 100644 index 00000000..43d05367 --- /dev/null +++ b/inst/logs/190208152347_gdal_warp.txt @@ -0,0 +1,3 @@ +/tmp/Rtmpv3tlvr/sen2r_68b62961ca69/group68b6840d9e9/warped/BOA/S2A2A_20180810_065_Scalve_BOA_10.vrt +/tmp/Rtmpv3tlvr/sen2r_68b62961ca69/group68b6840d9e9/warped/BOA/S2A2A_20180807_022_Scalve_BOA_10.vrt +/tmp/Rtmpv3tlvr/sen2r_68b62961ca69/group68b6840d9e9/warped/BOA/S2B2A_20180805_065_Scalve_BOA_10.vrt diff --git a/inst/logs/190208152944_s2_mask.txt b/inst/logs/190208152944_s2_mask.txt new file mode 100644 index 00000000..bd121008 --- /dev/null +++ b/inst/logs/190208152944_s2_mask.txt @@ -0,0 +1,6 @@ +/home/lranghetti/share/git/github/ranghetti/sen2r/inst/extdata/example_files/out/out_test2/BOA/S2A2A_20180810_065_Scalve_BOA_10.tif +/home/lranghetti/share/git/github/ranghetti/sen2r/inst/extdata/example_files/out/out_test2/BOA/S2A2A_20180807_022_Scalve_BOA_10.tif +/home/lranghetti/share/git/github/ranghetti/sen2r/inst/extdata/example_files/out/out_test2/BOA/S2B2A_20180805_065_Scalve_BOA_10.tif +/tmp/Rtmpv3tlvr/sen2r_68b631ff75ec/group68b62f0de626/warped/SCL/S2A2A_20180810_065_Scalve_SCL_10.tif +/tmp/Rtmpv3tlvr/sen2r_68b631ff75ec/group68b62f0de626/warped/SCL/S2A2A_20180807_022_Scalve_SCL_10.tif +/tmp/Rtmpv3tlvr/sen2r_68b631ff75ec/group68b62f0de626/warped/SCL/S2B2A_20180805_065_Scalve_SCL_10.tif diff --git a/vignettes/installation.Rmd b/vignettes/installation.Rmd index 9d749c52..203b6ef7 100644 --- a/vignettes/installation.Rmd +++ b/vignettes/installation.Rmd @@ -87,8 +87,8 @@ To install both package dependencies and runtime binaries (excepting **sen2cor** sudo pacman -S --noconfirm r base-devel gcc-fortran python-gdal wget aria2 jq protobuf git cd /tmp; git clone https://aur.archlinux.org/gyp-git.git cd gyp-git; makepkg -si --noconfirm - cd /tmp; git clone https://aur.archlinux.org/v8.git - cd v8; makepkg -si --noconfirm + cd /tmp; git clone https://aur.archlinux.org/v8-3.14.git + cd v8-3.14; makepkg -si --noconfirm cd /tmp; git clone https://aur.archlinux.org/udunits.git cd udunits; makepkg -si --noconfirm ```