From 67ecb5e89f970eab3a7165f0af3ede8e31d639de Mon Sep 17 00:00:00 2001
From: Yi-Te Huang <y.t.d.huang@phys.ncku.edu.tw>
Date: Tue, 31 Oct 2023 21:32:30 +0900
Subject: [PATCH] fix docs and CI

---
 .buildkite/pipeline.yml        | 19 +++++++++++++++
 .github/workflows/Runtests.yml |  2 --
 docs/src/extensions/CUDA.md    | 42 ++++++++++++----------------------
 3 files changed, 33 insertions(+), 30 deletions(-)
 create mode 100644 .buildkite/pipeline.yml

diff --git a/.buildkite/pipeline.yml b/.buildkite/pipeline.yml
new file mode 100644
index 00000000..807314b5
--- /dev/null
+++ b/.buildkite/pipeline.yml
@@ -0,0 +1,19 @@
+steps:
+  - label: "HierarchicalEOM_CUDAExt"
+    plugins:
+      - JuliaCI/julia#v1:
+          version: "1"
+      - JuliaCI/julia-test#v1:
+          test_args: "--quickfail"
+      - JuliaCI/julia-coverage#v1:
+          dirs:
+            - src
+    agents:
+      queue: "juliagpu"
+      cuda: "*"
+    env:
+      GROUP: "HierarchicalEOM_CUDAExt"
+      SECRET_CODECOV_TOKEN: "kaIXEN51HinaQ4JGclQcIgxeMMtXDb5uvnP3E2eKrH4Eruf2pKd5QwUGcIVL8+rcWeo5FWj883rNxRQEH3YeCWs6/i7vzs+ORvG51QeCNYQgNqFzPsWRcq5qJYc+JPFbisS7q9nghqWTwr52cnjarD4Xx3ceGorMyS5NvFpCNxMgqHNyGkLvipxcTTJfKZK61bpnbntoIjiIO1XSZKjcxnXFGFnolV9BHCr5v8f7F42n2tUH7X3nDHmTBr1AbO2lFAU9ra/KezHcIf0wg2HcV8LZD0+mj8q/SBPjQZSH7cxwx4Q2eTjT4Sw7xnrBGuySVm8ZPCAV7nRNEHo+VqR+GQ=="
+    timeout_in_minutes: 30
+    # Don't run Buildkite if the commit message includes the text [skip tests]
+    if: build.message !~ /\[skip tests\]/
\ No newline at end of file
diff --git a/.github/workflows/Runtests.yml b/.github/workflows/Runtests.yml
index 96fd6126..36069c2f 100644
--- a/.github/workflows/Runtests.yml
+++ b/.github/workflows/Runtests.yml
@@ -21,8 +21,6 @@ jobs:
         include:
           - julia-version: '1'
             group: 'HierarchicalEOM_QOExt'
-          - julia-version: '1'
-            group: 'HierarchicalEOM_CUDAExt'
     steps:
       - uses: actions/checkout@v4
       - uses: julia-actions/setup-julia@v1
diff --git a/docs/src/extensions/CUDA.md b/docs/src/extensions/CUDA.md
index 2a7d194e..49ec42e6 100644
--- a/docs/src/extensions/CUDA.md
+++ b/docs/src/extensions/CUDA.md
@@ -20,30 +20,16 @@ Therefore, we wrapped several functions in `CUDA` and `CUDA.CUSPARSE` in order t
 The extension will be automatically loaded if user imports the package `CUDA.jl` :
 
 ````@example CUDA_Ext_example
-using BenchmarkTools
 using CUDA
 using HierarchicalEOM
 using LinearSolve # to change the solver for better GPU performance
-using Plots
-````
-
-### Check version info. of `HierarchicalEOM.jl`
-
-````@example CUDA_Ext_example
-HierarchicalEOM.versioninfo()
-````
-
-### Check version info. of `CUDA.jl`
-
-````@example CUDA_Ext_example
-CUDA.versioninfo()
 ````
 
 ### Setup
 
 Here, we demonstrate this extension by using the example of [the single-impurity Anderson model](@ref exp-SIAM). 
 
-````@example CUDA_Ext_example
+```julia
 ϵ  = -5
 U  = 10
 Γ  = 2
@@ -78,31 +64,31 @@ M_odd_gpu  = cu(M_odd_cpu)
 
 # solve steady state with CPU
 ados_ss = SteadyState(M_even_cpu);
-````
+```
 
 !!! note "Note"
     This extension does not support for solving [`SteadyState`](@ref doc-Stationary-State) on GPU since it is not efficient and might get wrong solutions. If you really want to obtain the stationary state with GPU, you can repeatedly solve the [`evolution`](@ref doc-Time-Evolution) until you find it.
 
 ### Solving time evolution with CPU
 
-````@example CUDA_Ext_example
-@benchmark ados_list_cpu = evolution(M_even_cpu, ρ0, tlist; verbose=false)
-````
+```julia
+ados_list_cpu = evolution(M_even_cpu, ρ0, tlist; verbose=false)
+```
 
 ### Solving time evolution with GPU
 
-````@example CUDA_Ext_example
-@benchmark ados_list_gpu = evolution(M_even_gpu, ρ0, tlist; verbose=false)
-````
+```julia
+ados_list_gpu = evolution(M_even_gpu, ρ0, tlist; verbose=false)
+```
 
 ### Solving Spectrum with CPU
 
-````@example CUDA_Ext_example
-@benchmark dos_cpu = spectrum(M_odd_cpu, ados_ss, d_up, ωlist; verbose=false)
-````
+```julia
+dos_cpu = spectrum(M_odd_cpu, ados_ss, d_up, ωlist; verbose=false)
+```
 
 ### Solving Spectrum with GPU
 
-````@example CUDA_Ext_example
-@benchmark dos_gpu = spectrum(M_odd_gpu, ados_ss, d_up, ωlist; solver=KrylovJL_BICGSTAB(rtol=1f-10, atol=1f-12), verbose=false)
-````
\ No newline at end of file
+```julia
+dos_gpu = spectrum(M_odd_gpu, ados_ss, d_up, ωlist; solver=KrylovJL_BICGSTAB(rtol=1f-10, atol=1f-12), verbose=false)
+```
\ No newline at end of file