Different Result in Editor than when rendering qmd

[Beedmoser]

Description

I can run the below code in the editor and get the desired results. However, I cannot get the same results when I try to render the same code.

---

title: "mwe"
format: html

    library(terra)
    library(rnaturalearth)
    
    france <- rnaturalearth::ne_states(country = "france",
                                       returnclass = "sv")
    plot(france)

Then, Quarto throws:
==> quarto preview reprex.qmd --to html --no-watch-inputs --no-browse

processing file: reprex.qmd
|................................... | 67% [unnamed-chunk-1]

Quitting from lines 7-13 [unnamed-chunk-1] (reprex.qmd)
Error in value[[3L]]():
! Failed to install the rnaturalearthhires package.
Please try installing the package for yourself using the following command:
devtools::install_github("ropensci/rnaturalearthhires")
Backtrace:

1. rnaturalearth::ne_states(country = "france", returnclass = "sv")
2. rnaturalearth::check_rnaturalearthhires()
3. rnaturalearth::install_rnaturalearthhires()
4. base::tryCatch(...)
5. base (local) tryCatchList(expr, classes, parentenv, handlers)
6. base (local) tryCatchOne(...)
7. value[3L]

Ausführung angehalten

[mcanouil]

Could you properly format your post using code blocks for code and terminal outputs? Thanks.
If your code contains code blocks, you need to enclose it using more backticks, i.e., usually four ````.
See https://quarto.org/bug-reports.html#formatting-make-githubs-markdown-work-for-us.

This being said, it works "fine" besides the fact that the R package rnaturalearth is installing rnaturalearthhires without any consent and regardless of your setup (in my opinion, that's bad).

You should check that you are running Quarto in the same environment where the R packages are installed.

[Beedmoser]

I withdraw the question. The solution is to insert .libPaths("C:/Users/{…}/AppData/Local/R/win-library/4.3") since it is possible to have different paths for quarto as for r. Best Beat Beat Moser Bergstrasse 9 8322 Madetswil FON +41 79 257 96 00 Von: Mickaël Canouil ***@***.***> Gesendet: Montag, 30. September 2024 13:09 An: quarto-dev/quarto-cli ***@***.***> Cc: Beat Moser ***@***.***>; Author ***@***.***> Betreff: Re: [quarto-dev/quarto-cli] Different Result in Editor than when rendering qmd (Discussion #10848) Could you properly format your post using code blocks for code and terminal outputs? Thanks. If your code contains code blocks, you need to enclose it using more backticks, i.e., usually four ````. See https://quarto.org/bug-reports.html#formatting-make-githubs-markdown-work-for-us. — Reply to this email directly, view it on GitHub<#10848 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/A4323VKUD24GKPWZLOYQ5WTZZEWNDAVCNFSM6AAAAABOSKSS26VHI2DSMVQWIX3LMV43URDJONRXK43TNFXW4Q3PNVWWK3TUHMYTANZZGY4TQMQ>. You are receiving this because you authored the thread.Message ID: ***@***.******@***.***>>