Skip to content

Releases: qbicsoftware/projectwizard-portlet

Version 1.9.0

02 Nov 17:14
Compare
Choose a tag to compare
  • add support for proteomics import format
  • changing metadata after using import formats is now only possible until all entries are valid
  • fix: project attachments can again be uploaded after project registration
  • fix: metadata update of experimental design conditions and other properties stored at the experiment level
  • some code refactoring
  • fix travis deploy

Version 1.8.4

14 Oct 15:58
bb3693e
Compare
Choose a tag to compare
  • use latest parent pom
  • fix: registering imported openBIS/"QBiC" experimental design format does no longer cause an exception

Version 1.8.3

13 Oct 15:33
Compare
Choose a tag to compare

Release needed for travis to include missing dependencies.

Version 1.8.2

13 Oct 12:13
Compare
Choose a tag to compare
  • it is now also possible to add omero projects and entities when creating projects via the import function
  • clean up code responsible for omero connection
  • many openbis calls now use the v3 API
  • use latest dependency versions where possible
  • use new dependency repo
  • add maven central repo to pom to speed up building
  • fix travis settings

Version 1.8.0

25 Jun 14:27
853d4f4
Compare
Choose a tag to compare
  • Omero Imaging support: if the imaging option is selected, species and tissue IDs are used to create entities in a connected Omero instance
  • Infection studies/expression systems: it is now possible to select a cross of species from which samples are taken. This can be a useful information for analysis of expressed genes or proteins
  • Several small changes to make code more readable
  • Metadata update is now faster if only properties that are stored on the experiment level (as opposed to sample properties) are changed
  • Selectable properties for metadata update are now sorted by name
  • Metadata update now warns the user about selecting the same property for two different columns - this is not possible any more, as information would get lost

Version 1.7.0

06 Nov 14:45
Compare
Choose a tag to compare

Bug fixes:

  • ligandomic project import now allows download of barcodes again
  • forwarding to project browser after project creation
  • updating experimental factors now works even if multiple factor levels (experimental conditions) are overwritten by assigning samples to a different factor level
  • number of samples is correctly displayed in metadata update table

Features:

  • some speed up for manipulation of large projects
  • uses new configuration manager, leading to much less code
  • various updated dependencies
  • various clean up of unused/clunky code
  • easier input (less rules) for custom experimental factor labels
  • add "transient expression" to available predefined experimental factors
  • add separator option to imports (semicolon and comma)
  • update available space list after new space is added
  • Basic Omero support (not running, yet)

Version 1.5.3

26 Nov 16:33
Compare
Choose a tag to compare

Fix: adding samples via wizard steps that do not change the existing experimental design will not result in a crash

Version 1.5.2

23 Nov 15:39
Compare
Choose a tag to compare
  • Fix: importing samples that do not change the existing experimental design will not result in a crash
  • Fix: proteomics runs based on samples with experimental factors are now correctly registered

See version 1.5.1 for help with upgrading the openBIS data model from earlier versions.

Version 1.5.1

21 Nov 10:06
Compare
Choose a tag to compare
  • Upgrade experimental design data model in order to speed up many processes in the portal. Sample properties are now stored in a single XML attached to the Project Info Experiment. openBIS data model update is necessary by using master-data.py. Old projects can be updated via the Admin Tab.
  • Q_SAMPLE_TYPE property can now be updated in Metadata Upload Tab
  • Small bug fixes