diff --git a/.gitignore b/.gitignore index e4500fd..29b5d7a 100644 --- a/.gitignore +++ b/.gitignore @@ -1,2 +1,3 @@ .DS_Store merged.css +.idea \ No newline at end of file diff --git a/custom.css b/ncct/custom.css similarity index 91% rename from custom.css rename to ncct/custom.css index b6e200c..b784001 100644 --- a/custom.css +++ b/ncct/custom.css @@ -367,3 +367,37 @@ a[target="_blank"].btn:after { position: relative; bottom: 10px; } + +.ncct-information-icon { + background-size: 100% 100%; + display: inline-block; + height: 20px; + width: 20px; + position:absolute; + right:0px; +} + +.ncct-tooltip-text { + visibility: hidden; + opacity: .9; + background-color: #027ba4; + color: #fff; + padding: 1em; + border-radius: 6px; + position: absolute; + z-index: 1; + top: -5px; + right: 10%; + line-height: 15px; + font-size: 0.875em; + width: max-content; + max-width: 300px; +} + +@media (min-width: 1750px) { + .ncct-tooltip-text { + left: 105%; + } +} + + diff --git a/custom_bootstrap.css b/ncct/custom_bootstrap.css similarity index 99% rename from custom_bootstrap.css rename to ncct/custom_bootstrap.css index e1de4b1..6a9f664 100644 --- a/custom_bootstrap.css +++ b/ncct/custom_bootstrap.css @@ -283,6 +283,8 @@ .bs4-card-deck .bs4-card { margin-bottom: 15px; + min-width: 300px; + max-width: 470px; } @media (min-width: 576px) { diff --git a/custom_liferay_overwrite.css b/ncct/custom_liferay_overwrite.css similarity index 100% rename from custom_liferay_overwrite.css rename to ncct/custom_liferay_overwrite.css diff --git a/merge-custom-css.sh b/ncct/merge-custom-css.sh similarity index 100% rename from merge-custom-css.sh rename to ncct/merge-custom-css.sh diff --git a/site/bioinformatics-services/bioinformatics-services.html b/ncct/site/bioinformatics-services/bioinformatics-services.html similarity index 100% rename from site/bioinformatics-services/bioinformatics-services.html rename to ncct/site/bioinformatics-services/bioinformatics-services.html diff --git a/site/bioinformatics-services/epigenomics.html b/ncct/site/bioinformatics-services/epigenomics.html similarity index 100% rename from site/bioinformatics-services/epigenomics.html rename to ncct/site/bioinformatics-services/epigenomics.html diff --git a/site/bioinformatics-services/genomics.html b/ncct/site/bioinformatics-services/genomics.html similarity index 100% rename from site/bioinformatics-services/genomics.html rename to ncct/site/bioinformatics-services/genomics.html diff --git a/site/bioinformatics-services/immunoinformatics.html b/ncct/site/bioinformatics-services/immunoinformatics.html similarity index 100% rename from site/bioinformatics-services/immunoinformatics.html rename to ncct/site/bioinformatics-services/immunoinformatics.html diff --git a/site/bioinformatics-services/metagenomics.html b/ncct/site/bioinformatics-services/metagenomics.html similarity index 100% rename from site/bioinformatics-services/metagenomics.html rename to ncct/site/bioinformatics-services/metagenomics.html diff --git a/site/bioinformatics-services/proteomics.html b/ncct/site/bioinformatics-services/proteomics.html similarity index 100% rename from site/bioinformatics-services/proteomics.html rename to ncct/site/bioinformatics-services/proteomics.html diff --git a/site/bioinformatics-services/transcriptomics.html b/ncct/site/bioinformatics-services/transcriptomics.html similarity index 100% rename from site/bioinformatics-services/transcriptomics.html rename to ncct/site/bioinformatics-services/transcriptomics.html diff --git a/site/impressum/allgemeine-informationen.html b/ncct/site/impressum/allgemeine-informationen.html similarity index 100% rename from site/impressum/allgemeine-informationen.html rename to ncct/site/impressum/allgemeine-informationen.html diff --git a/site/impressum/ansprechpartner.html b/ncct/site/impressum/ansprechpartner.html similarity index 100% rename from site/impressum/ansprechpartner.html rename to ncct/site/impressum/ansprechpartner.html diff --git a/site/impressum/bildnachweise.html b/ncct/site/impressum/bildnachweise.html similarity index 100% rename from site/impressum/bildnachweise.html rename to ncct/site/impressum/bildnachweise.html diff --git a/site/impressum/externe-links.html b/ncct/site/impressum/externe-links.html similarity index 100% rename from site/impressum/externe-links.html rename to ncct/site/impressum/externe-links.html diff --git a/site/impressum/haftungsausschluss.html b/ncct/site/impressum/haftungsausschluss.html similarity index 100% rename from site/impressum/haftungsausschluss.html rename to ncct/site/impressum/haftungsausschluss.html diff --git a/site/impressum/introduction.html b/ncct/site/impressum/introduction.html similarity index 100% rename from site/impressum/introduction.html rename to ncct/site/impressum/introduction.html diff --git a/site/impressum/urheberrecht.html b/ncct/site/impressum/urheberrecht.html similarity index 100% rename from site/impressum/urheberrecht.html rename to ncct/site/impressum/urheberrecht.html diff --git a/site/our-center/cc-network.html b/ncct/site/our-center/cc-network.html similarity index 96% rename from site/our-center/cc-network.html rename to ncct/site/our-center/cc-network.html index 8108ab6..ae2d96e 100644 --- a/site/our-center/cc-network.html +++ b/ncct/site/our-center/cc-network.html @@ -1,5 +1,5 @@
-
+
 
The Competence-Center Network
@@ -34,4 +34,4 @@
-
\ No newline at end of file + diff --git a/ncct/site/our-center/institutes.html b/ncct/site/our-center/institutes.html new file mode 100644 index 0000000..4b8bbfe --- /dev/null +++ b/ncct/site/our-center/institutes.html @@ -0,0 +1,84 @@ +
+
+
+
+
A collaborative effort
+
+ +
+
+
+
+
Institute + of Medical Genetics and Applied Genomics
+ +
+

Prof. Olaf Riess, + coordinator

+ +

Contact Persons:

+ +

Dr. Nicolas + Casadei,

+ +

Head of the Core Facility

+ +

Prof. + Stephan Ossowski,

+ +

Head of Computational Genomics

+
+
+
+ +
+
+
Institute of Medical Microbiology and Hygiene +
+ +
+

Apl. Prof. Silke + Peter

+ +

Contact Persons:

+ Dr. Janina Vogt + +

Project Manager and Research Scientist

+ Dr. Janina Geißert-Janek + +

Project Manager and Research Scientist

+
+
+
+ +
+
+
Quantitative Biology Center (QBiC)
+ +
 
+ +
+

Dr. Sven Nahnsen

+ +

Contact Persons:

+ Stefan + Czemmel, + +

Team Leader Project Management & Bioinfomatics Support

+
+
+
+
+
+
+
+
diff --git a/site/our-center/ncct-contact.html b/ncct/site/our-center/ncct-contact.html similarity index 76% rename from site/our-center/ncct-contact.html rename to ncct/site/our-center/ncct-contact.html index c6d2679..c82e395 100644 --- a/site/our-center/ncct-contact.html +++ b/ncct/site/our-center/ncct-contact.html @@ -1,7 +1,7 @@
-
+
We'd love to hear from you!
@@ -13,8 +13,14 @@
Address
-

NGS Competence Center Tübingen
+

Institute of Medical Genetics and Applied Genomics
Calwerstraße 7, 72076 Tübingen.

+ +

Institute of Medical Microbiology and Hygiene
+ Elfriede-Aulhorn-Straße 6, 72076 Tübingen.

+ +

Quantitative Biology Center
+ Auf der Morgenstelle 10, 72076 Tübingen.

@@ -44,4 +50,4 @@ -
\ No newline at end of file + diff --git a/site/our-center/vision.html b/ncct/site/our-center/vision.html similarity index 92% rename from site/our-center/vision.html rename to ncct/site/our-center/vision.html index b859567..6f31dfa 100644 --- a/site/our-center/vision.html +++ b/ncct/site/our-center/vision.html @@ -11,7 +11,7 @@ strengthening the use of high-throughput sequencing methods in Germany.

The center offers automated high-throughput services and a rich portfolio of sequencing - solutions using the latest Illumina and Oxford Nanopore Technologies + solutions using the latest Illumina, Pacific Biosciences (PACBIO)and Oxford Nanopore Technologies (ONT) sequencers. As part of the Quantitative Biology Center (QBiC), NCCT builds on established core facility structures and integrates with the existing infrastructure for data management and bioinformatics support. diff --git a/ncct/site/resources/resources-header.html b/ncct/site/resources/resources-header.html new file mode 100644 index 0000000..c234417 --- /dev/null +++ b/ncct/site/resources/resources-header.html @@ -0,0 +1,9 @@ +
+
+
+
+
Resources
+
+
+
+
diff --git a/ncct/site/resources/resources-mandatory-information.html b/ncct/site/resources/resources-mandatory-information.html new file mode 100644 index 0000000..a216ee7 --- /dev/null +++ b/ncct/site/resources/resources-mandatory-information.html @@ -0,0 +1,36 @@ +
+
+
+
Mandatory Information
+
+ +
+
+
General Information + +
+
General Information
+
+
+
+ +
+
Metadata Sheet + +
+
Metadata Sheet
+
+
+
+ +
+
Sample Isolation Guidelines + +
+
Sample Isolation
+
+
+
+
+
+
diff --git a/ncct/site/resources/resources-sample-sequencing-guidelines.html b/ncct/site/resources/resources-sample-sequencing-guidelines.html new file mode 100644 index 0000000..19ee841 --- /dev/null +++ b/ncct/site/resources/resources-sample-sequencing-guidelines.html @@ -0,0 +1,47 @@ +
+
+
+
+
Sequencing Guidelines
+
+ +
+
+
AmpliconGuidelines + +
+
Amplicon
+
+
+
+ +
+
BacterialGuidelines + +
+
Bacterial cell pellets
+
+
+
+ +
+
NucleicRequirements + +
+
Nucleic acid
+
+
+
+ +
+
RNA_Single_Cell + +
+
RNA Single Cell
+
+
+
+
+
+
+
diff --git a/ncct/site/resources/resources-sample-submission-guidelines.html b/ncct/site/resources/resources-sample-submission-guidelines.html new file mode 100644 index 0000000..48c3448 --- /dev/null +++ b/ncct/site/resources/resources-sample-submission-guidelines.html @@ -0,0 +1,38 @@ +
+
+
+
+
Sample Submission Guidelines
+
+ +
+
+
NCCT_Prokaryote_Guidelines + +
+
Prokaryote Guidelines
+
+
+
+ +
+
EukaryoteGuidelines + +
+
Eukaryote Guidelines
+
+
+
+ +
+
LibraryGuidelines + +
+
Library and pools
+
+
+
+
+
+
+
diff --git a/ncct/site/sequencing-solutions/instruments.html b/ncct/site/sequencing-solutions/instruments.html new file mode 100644 index 0000000..7e657aa --- /dev/null +++ b/ncct/site/sequencing-solutions/instruments.html @@ -0,0 +1,42 @@ +
+
+
+
+
+
All major technologies under one roof!
+
+ +
+
+
+
Sequencers
+ +
    +
  • Illumina NextSeq500flexible mid-output sequencer
    • +
  • Illumina MiSeqlow-output sequencer
    • +
  • Illumina NovaSeq6000production scale instrument
    • +
  • Illumina NovaSeq X Plusproven sequencer with more power
    • +
  • ONT MinIONlow throughput long read sequencer
    • +
  • ONT PromethION high throughput long-read sequencer
    • +
+
+ +
+
Sample Preparation Systems
+ +
    +
  • Qiagen QIAcubehigh throughput isolation
    • +
  • Agilent Bravoproduction scale liquid handler
    • +
  • Qiagen QIASymphonyhigh throughput isolation
    • +
  • Tecan Fluent 780high throughput liquid handler
    • +
  • 10x Genomicssingle cell emulsion preparation
    • +
  • Beckman Biomek i5high throughput liquid handler
    • +
  • Beckman Biomek i7high throughput liquid handler
    • +
+
+
+
+
+
+
+
diff --git a/ncct/site/sequencing-solutions/methods.html b/ncct/site/sequencing-solutions/methods.html new file mode 100644 index 0000000..cffa038 --- /dev/null +++ b/ncct/site/sequencing-solutions/methods.html @@ -0,0 +1,127 @@ +
+
+
+
+
+
Sequencing Methods
+
+ +
+
+
Variant + Detection +
+ +
    +
  • Whole Genome sequencing Sequencing of the whole genome of an organism, including coding and non-coding regions +
    • +
  • Long-Read sequencing Sequencing of long inserts of DNA allowing better mapping and phasing of the genome +
    • +
  • Panel sequencing In depth sequencing of a particular set of DNA regions using panels +
    • +
  • Exome sequencing Sequencing of all protein coding regions of the genome of an organism +
    • +
  • Targeted RNA sequencing Sequencing of a subset of transcripts enabling both qualitative and quantitative expression analysis +
    • +
+
+ +
+
Expression + Analysis +
+ +
    +
  • mRNA sequencing Sequencing of all messenger RNA transcripts which provides information on the whole coding transcriptome of an organism +
    • +
  • Total RNA sequencing Sequencing of all types of RNAs present, including diverse small and non-coding RNAs +
    • +
  • 3'-Sequencing Sequencing of transcripts 3’ UTR allowing gene expression analysis with high sensitivity and in degraded sample +
    • +
  • scRNA sequencing Sequencing the RNA of individual cells to capture cell heterogeneity +
    • +
  • miRNA sequencing Sequencing of micro RNAs which confer gene silencing and are often associated with various cellular mechanisms +
    • +
  • smallRNA sequencing Sequencing of small RNAs (including micro RNA) which exert diverse functions of gene regulation +
    • +
  • Long-Read RNA sequencing Sequencing of full-length RNA allowing precise isoform detection +
    • +
+
+ +
+
Metagenomics +
+ +
    +
  • Shotgun MetagenomicsSequencing of all genomic information of a sample containing DNA of a community of organisms +
    • +
  • 16S/Amplicon Sequencing Sequencing of the 16S rRNA coding region to identify different taxa in a sample containing DNA of diverse organisms +
    • +
  • MetatranscriptomicsSequencing of the RNA in a heterogenous sample to analyse gene expression in a community of organisms +
    • +
+
+ +
+
Epigenomics +
+ +
    +
  • Whole genome bisulfite sequencing Investigation of the methylation pattern in the whole genome of an organism +
    • +
+
+
+
+
+
+
diff --git a/ncct/site/start-project/project-questions.html b/ncct/site/start-project/project-questions.html new file mode 100644 index 0000000..d7c8678 --- /dev/null +++ b/ncct/site/start-project/project-questions.html @@ -0,0 +1,27 @@ +
+
+
+
+
Questions we will ask you:
+ +
    +
  • What is the aim of your project?
    • +
  • How many samples do you have?
    • +
  • How many replicates are planned?
    • +
  • What is your sample type? (e.g. library, DNA/RNA, blood, stool,...)
    • +
  • Are your samples GMO, do they present a biosafety risk?
    • +
  • Which species are you working on? (e.g. human, mouse etc)
    • +
  • Is bioinformatics analysis needed? If yes, to what degree?
    • +
+ +
Optional Questions:
+ +
    +
  • Which technology should be used? (e.g. Illumina/Pacbio/Nanopore/10x)
    • +
  • How do you plan to apply the sequenced data? (e.g. WGS, exome, metagenome,...)
    • +
  • What is the desired sequencing depth? (coverage or output in Gb/sample or Mio Reads/sample)
    • +
+
+
+
+
diff --git a/site/start-project/project-submission.html b/ncct/site/start-project/project-submission.html similarity index 100% rename from site/start-project/project-submission.html rename to ncct/site/start-project/project-submission.html diff --git a/site/welcome/alert.html b/ncct/site/welcome/alert.html similarity index 100% rename from site/welcome/alert.html rename to ncct/site/welcome/alert.html diff --git a/site/welcome/landing-page.html b/ncct/site/welcome/landing-page.html similarity index 100% rename from site/welcome/landing-page.html rename to ncct/site/welcome/landing-page.html diff --git a/snippets/borderless-definition-table.html b/ncct/snippets/borderless-definition-table.html similarity index 100% rename from snippets/borderless-definition-table.html rename to ncct/snippets/borderless-definition-table.html diff --git a/snippets/card-deck.html b/ncct/snippets/card-deck.html similarity index 100% rename from snippets/card-deck.html rename to ncct/snippets/card-deck.html diff --git a/snippets/card-list-group.html b/ncct/snippets/card-list-group.html similarity index 100% rename from snippets/card-list-group.html rename to ncct/snippets/card-list-group.html diff --git a/snippets/card-list.html b/ncct/snippets/card-list.html similarity index 100% rename from snippets/card-list.html rename to ncct/snippets/card-list.html diff --git a/snippets/media-list.html b/ncct/snippets/media-list.html similarity index 100% rename from snippets/media-list.html rename to ncct/snippets/media-list.html diff --git a/snippets/slide.html b/ncct/snippets/slide.html similarity index 100% rename from snippets/slide.html rename to ncct/snippets/slide.html diff --git a/qbic/site/Project Management/Offers.css b/qbic/site/Project Management/Offers.css new file mode 100644 index 0000000..a73f9ee --- /dev/null +++ b/qbic/site/Project Management/Offers.css @@ -0,0 +1,5 @@ +/* Adapt Textbox height and text size for vaadin portlets*/ +.aui input[type="text"] { + height: 40px; + font-size: 16px; +} \ No newline at end of file diff --git a/qbic/site/Project Management/ProjectBrowser.css b/qbic/site/Project Management/ProjectBrowser.css new file mode 100644 index 0000000..35b8bc7 --- /dev/null +++ b/qbic/site/Project Management/ProjectBrowser.css @@ -0,0 +1,7 @@ +.v-select { + height: 100% !important; + } + + .v-select-select { + height: 100% !important; + } \ No newline at end of file diff --git a/qbic/site/Project Management/SampleTrackingViewer.css b/qbic/site/Project Management/SampleTrackingViewer.css new file mode 100644 index 0000000..25665a2 --- /dev/null +++ b/qbic/site/Project Management/SampleTrackingViewer.css @@ -0,0 +1,27 @@ +.notification-banner { + display:flex; + justify-content:center; +} + +.notification-icon { + height:20px; + width:20px; + min-height: 20px; + min-width: 20px; + display:inherit; +} + +.notification-spacer { + min-width: 70px; +} + +.notification-text { + font-size: 16px; + color:black; + display: inline-block; +} + +.external-hyperlink a { + color: #128ade; + font-weight: 300; +} diff --git a/qbic/site/Snippets/Banner.html b/qbic/site/Snippets/Banner.html new file mode 100644 index 0000000..754ec7c --- /dev/null +++ b/qbic/site/Snippets/Banner.html @@ -0,0 +1,31 @@ +
+
+ +
 
+ +
Want to help us improve? Fill out our survey!
+
+ +
+
+ +
 
+ +
Want to help us improve? Fill out our survey!
+
+ +
+
+ +
 
+ +
Want to help us improve? Fill out our survey!
+
+ +
+
+ +
 
+ +
Want to help us improve? Fill out our survey!
+
diff --git a/site/downloads/sops.html b/site/downloads/sops.html deleted file mode 100644 index 2d7339c..0000000 --- a/site/downloads/sops.html +++ /dev/null @@ -1,57 +0,0 @@ -
-
-
-
-
Standard Operating Procedures
-
-
-
-
-
- -
-
Variant Detection
- -
    -
  • Whole Genome sequencing
    • -
  • Long-Read sequencing
    • -
  • Panel sequencing
    • -
  • Exome sequencing
    • -
  • Targeted RNA sequencing
    • -
-
- -
-
Expression Analysis
- -
    -
  • mRNA sequencing
    • -
  • Total RNA sequencing
    • -
  • 3'-Sequencing
    • -
  • scRNA sequencing
    • -
  • miRNA sequencing
    • -
  • smallRNA sequencing
    • -
  • long-Read RNA sequencing
    • -
-
- -
-
Metagenomics
- -
    -
  • Shotgun Metagenomics
    • -
  • 16S/Amplicon Sequencing
    • -
  • Metatranscriptomics
    • -
-
- -
-
Epigenomics
-
    -
  • Whole genome bisulfite sequencing
    • -
-
- -
-
-
\ No newline at end of file diff --git a/site/downloads/submission-documents.html b/site/downloads/submission-documents.html deleted file mode 100644 index fe06ec1..0000000 --- a/site/downloads/submission-documents.html +++ /dev/null @@ -1,28 +0,0 @@ -
-
-
-
-
-
Project Submission Documents
-
-
-
-
- -
-
-
- -
-
-
-
\ No newline at end of file diff --git a/site/our-center/institutes.html b/site/our-center/institutes.html deleted file mode 100644 index 6a773de..0000000 --- a/site/our-center/institutes.html +++ /dev/null @@ -1,86 +0,0 @@ -
-
-
-
-
A collaborative effort
-
- -
-
-
-
-
Institute of Medical - Genetics and Applied Genomics
- -
-

Prof. Olaf Riess, coordinator

- -

Contact Persons:

- -

Dr. Nicolas Casadei,

- -

Head of the Core Facility

- -

Prof. Stephan Ossowski, -

- -

Head of Computational Genomics

-
-
-
- -
-
-
Institute of Medical Microbiology and Hygiene
- -
-

Apl. Prof. Julia-Stefanie Frick

- -

Contact Persons:

- Apl. Prof. Silke Peter, - -

Clinical Microbiology

- - Dr. Angel Angelov, - -

Bioinformatics Research Scientist

- Dr. Michael Sonnabend, - -

Coordinator and Research Scientist

- Dr. Janina Geißert - -

Project Manager and Research Scientist

-
-
-
- -
-
-
Quantitative Biology Center (QBiC)
- -
-

Dr. Sven Nahnsen

- -

Contact Persons:

- Dr. Stefan Czemmel, - -

Coordinator Bioinformatics support

- Marie Gauder, - -

Coordinator and Bioinformatics Research Scientist

-
-
-
-
-
-
-
-
\ No newline at end of file diff --git a/site/sequencing-solutions/instruments.html b/site/sequencing-solutions/instruments.html deleted file mode 100644 index d9e53b1..0000000 --- a/site/sequencing-solutions/instruments.html +++ /dev/null @@ -1,39 +0,0 @@ -
-
-
-
All major technologies under one roof!
-
- -
-
-
-
Sequencers
- -
    -
  • NextSeq500
    • -
  • MiSeq
    • -
  • NovaSeq6000
    • -
  • DNBSEQ-G400
    • -
  • Nanopore MinION
    • -
  • Nanopore PromethION
    • -
  • PacBio Sequel II
    • -
-
- -
-
Sample Preparation - Systems
- -
    -
  • QIAcube
    • -
  • Agilent Bravo
    • -
  • QIASymphony
    • -
  • Tecan Fluent 780
    • -
  • MGISP-100
    • -
  • 10x Genomics
    • -
-
-
-
-
-
\ No newline at end of file diff --git a/site/sequencing-solutions/methods.html b/site/sequencing-solutions/methods.html deleted file mode 100644 index 96dd145..0000000 --- a/site/sequencing-solutions/methods.html +++ /dev/null @@ -1,57 +0,0 @@ -
-
-
-
-
-
Sequencing Methods
-
- -
-
-
Variant Detection
- -
    -
  • Whole Genome sequencing
    • -
  • Long-Read sequencing
    • -
  • Panel sequencing
    • -
  • Exome sequencing
    • -
  • Targeted RNA sequencing
    • -
-
- -
-
Expression Analysis
- -
    -
  • mRNA sequencing
    • -
  • Total RNA sequencing
    • -
  • 3'-Sequencing
    • -
  • scRNA sequencing
    • -
  • miRNA sequencing
    • -
  • smallRNA sequencing
    • -
  • long-Read RNA sequencing
    • -
-
- -
-
Metagenomics
- -
    -
  • Shotgun Metagenomics
    • -
  • 16S/Amplicon Sequencing
    • -
  • Metatranscriptomics
    • -
-
- -
-
Epigenomics
- -
    -
  • Whole genome bisulfite sequencing
    • -
-
-
-
-
-
-
\ No newline at end of file diff --git a/site/start-project/project-questions.html b/site/start-project/project-questions.html deleted file mode 100644 index 3cc3a3c..0000000 --- a/site/start-project/project-questions.html +++ /dev/null @@ -1,24 +0,0 @@ -
-
-
-
-
Questions we will ask you:
- -
    -
  • What is the aim of your project?
    • -
  • How many samples do you have?
    • -
  • How many replicates are planned?
    • -
  • What is your sample type? (e.g. library, DNA/RNA, blood, stool,...) -
    • -
  • Which technology should be used? (e.g. Illumina/Pacbio/Nanopore/10x) -
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  • How do you plan to apply the sequenced data? (e.g. WGS, exome, - metagenome,...)
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  • What is the desired sequencing depth? (coverage or output in - Gb/sample or Mio Reads/sample)
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  • Is bioinformatics analysis needed? If yes, to what degree?
    • -
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