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src/main/groovy/life/qbic/datamodel
datasets/datastructure/folders/nanopore Expand file tree Collapse file tree 4 files changed +8
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lines changed Original file line number Diff line number Diff line change @@ -6,7 +6,7 @@ import life.qbic.datamodel.datasets.datastructure.folders.DataFolder
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/**
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* A special case of a DataFolder, its name is always fast5_skip.
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*
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- * Its children field contains either a list of type List<Fast5Files>
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+ * Its children field contains a list of type List<Fast5Files>
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*
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*/
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class Fast5SkipFolder extends DataFolder {
Original file line number Diff line number Diff line change @@ -3,7 +3,7 @@ package life.qbic.datamodel.datasets.datastructure.folders.nanopore
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import life.qbic.datamodel.datasets.datastructure.folders.DataFolder
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/**
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- * A special case of a DataFolder, its name contains always pod5_fail.
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+ * A special case of a DataFolder, its name is always pod5_fail.
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*
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* Its children field contains either a list of type List<Pod5Files> or List<Pod5Folder>
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*
Original file line number Diff line number Diff line change @@ -6,7 +6,7 @@ import life.qbic.datamodel.datasets.datastructure.folders.DataFolder
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/**
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* A special case of a DataFolder, its name is always pod5_skip.
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*
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- * Its children field contains either a list of type List<Pod5Files>
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+ * Its children field contains a list of type List<Pod5Files>
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*
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*/
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class Pod5SkipFolder extends DataFolder {
Original file line number Diff line number Diff line change @@ -2,7 +2,7 @@ package life.qbic.datamodel.instruments
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/**
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- * Represents the Nanopore instrument output data structure schema.
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+ * Represents the Nanopore instrument output data structure schema generated by employing the dorado basecaller with Pod5Files .
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*
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* The original schema is defined in as resource and is
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* referenced here, wrapped in a Groovy class for reference
@@ -11,9 +11,9 @@ package life.qbic.datamodel.instruments
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*/
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class OxfordNanoporeInstrumentOutputDoradoMinimal {
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- private static final String SCHEMA_PATH = " /schemas/nanopore-instrument-output_minimal_dorado.schema.json"
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+ private static final String SCHEMA_PATH = " /schemas/nanopore-instrument-output_minimal_dorado.schema.json"
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- static InputStream getSchemaAsStream () {
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- return OxfordNanoporeInstrumentOutputDoradoMinimal . getResourceAsStream(SCHEMA_PATH )
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- }
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+ static InputStream getSchemaAsStream () {
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+ return OxfordNanoporeInstrumentOutputDoradoMinimal . getResourceAsStream(SCHEMA_PATH )
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+ }
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}
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