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qPCR for Dugbe (Nairoviridae - family: incl. CCHFV) #14

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qPCR4vir opened this issue Jan 8, 2019 · 0 comments
Open
4 of 5 tasks

qPCR for Dugbe (Nairoviridae - family: incl. CCHFV) #14

qPCR4vir opened this issue Jan 8, 2019 · 0 comments

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@qPCR4vir
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qPCR4vir commented Jan 8, 2019

Bunyavirales - order (Phylum:Negarnaviricota; Subphylum:Polyploviricotina; Class:Ellioviricetes)

Nairoviridae - family

Orthonairovirus - genus

*** Dugbe orthonairovirus - specie (IB AR 1792, IB H 11480)

  • seq. GB 99 seq..
    BLAST:
    20 L: 4>1000nt, bis 90%, Next 80% Kupe, 72% Hazara.
    20 M, 2 CG, bis 87%, Next Nairobi 70%.
    30 S, 8 CG, bis 90%. Next CCHFV 64%
  • primers Literatur
  • oligos
  • primers, PCR
  • exp

*** Hazara orthonairovirus - specie. see #15

*** Nairobi sheep disease orthonairovirus - specie. #12

Crimean-Congo hemorrhagic fever orthonairovirus - specie. see #25

@qPCR4vir qPCR4vir changed the title qPCR for species of the Nairoviridae - family qPCR for Dugbe and Hazara (Nairoviridae - family) Jan 8, 2019
@qPCR4vir qPCR4vir changed the title qPCR for Dugbe and Hazara (Nairoviridae - family) qPCR for Dugbe (Nairoviridae - family) Jan 9, 2019
@qPCR4vir qPCR4vir changed the title qPCR for Dugbe (Nairoviridae - family) qPCR for Dugbe (Nairoviridae - family: incl. CCHFV) Jan 14, 2019
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