From 32c050eeec6cb557b9a23aebca0e2a0be5d8bf3e Mon Sep 17 00:00:00 2001
From: Davide Fioriti <67809479+davide-f@users.noreply.github.com>
Date: Thu, 19 Sep 2024 18:02:52 +0200
Subject: [PATCH] Release v0.4.1 (#1103)

---
 config.default.yaml         |   2 +-
 config.tutorial.yaml        |   2 +-
 doc/conf.py                 |   2 +-
 doc/release_notes.rst       |  11 +-
 envs/environment.fixed.yaml | 255 +++++++++++++++++++-----------------
 5 files changed, 144 insertions(+), 128 deletions(-)

diff --git a/config.default.yaml b/config.default.yaml
index d42d5bc0c..bf276da66 100644
--- a/config.default.yaml
+++ b/config.default.yaml
@@ -2,7 +2,7 @@
 #
 # SPDX-License-Identifier: CC0-1.0
 
-version: 0.4.0
+version: 0.4.1
 tutorial: false
 
 logging:
diff --git a/config.tutorial.yaml b/config.tutorial.yaml
index 732702fad..e8fb947f2 100644
--- a/config.tutorial.yaml
+++ b/config.tutorial.yaml
@@ -2,7 +2,7 @@
 #
 # SPDX-License-Identifier: CC0-1.0
 
-version: 0.4.0
+version: 0.4.1
 tutorial: true
 
 logging:
diff --git a/doc/conf.py b/doc/conf.py
index 9263d4cc0..6f1edc018 100644
--- a/doc/conf.py
+++ b/doc/conf.py
@@ -65,7 +65,7 @@
 copyright = f"{datetime.datetime.today().year}, {author}"
 
 # The full version, including alpha/beta/rc tags
-release = "0.4.0"
+release = "0.4.1"
 
 # The name of the Pygments (syntax highlighting) style to use.
 pygments_style = "sphinx"
diff --git a/doc/release_notes.rst b/doc/release_notes.rst
index 76d8b3c31..07e93bee7 100644
--- a/doc/release_notes.rst
+++ b/doc/release_notes.rst
@@ -15,13 +15,20 @@ E.g. if a new rule becomes available describe how to use it `snakemake -j1 run_t
 **New Features and Major Changes**
 
 
+**Minor Changes and bug-fixing**
+
+
+PyPSA-Earth 0.4.1
+=================
+
+**New Features and Major Changes**
+
+* Add functionality to modify the cost assumptions using config files `PR #1097 <https://github.com/pypsa-meets-earth/pypsa-earth/pull/1097>`__
 
 **Minor Changes and bug-fixing**
 
 * Remove unused `countries_codes` argument from `load_GDP` function in `build_shapes.py` script, which was not being called as intended with positional arguments `PR #1069 <https://github.com/pypsa-meets-earth/pypsa-earth/pull/1069>`__
 * Fixed problematic float parsing (`_parse_float`) in `clean_osm_data.py` to make sure all OSM lines are correctly accounted for `PR #1089 <https://github.com/pypsa-meets-earth/pypsa-earth/pull/1089>`__
-* Add functionality to modify the cost assumptions using config files `PR #1097 <https://github.com/pypsa-meets-earth/pypsa-earth/pull/1097>`__
-
 * Fix minor bug for advanced csp implementation `PR #1076 <https://github.com/pypsa-meets-earth/pypsa-earth/pull/1076>`__
 * Fix minor bug in `build_powerplants.py` where the gas technology assignment incorrectly introduced NaN values for all powerplant technologies. `PR #1102 <https://github.com/pypsa-meets-earth/pypsa-earth/pull/1102>`__
 
diff --git a/envs/environment.fixed.yaml b/envs/environment.fixed.yaml
index 4d6d181ec..873a45f51 100644
--- a/envs/environment.fixed.yaml
+++ b/envs/environment.fixed.yaml
@@ -23,9 +23,9 @@ dependencies:
 - asttokens=2.4.1
 - async-lru=2.0.4
 - atk-1.0=2.38.0
-- atlite=0.2.13
+- atlite=0.2.14
 - attr=2.5.1
-- attrs=23.2.0
+- attrs=24.2.0
 - aws-c-auth=0.7.22
 - aws-c-cal=0.7.1
 - aws-c-common=0.9.23
@@ -48,7 +48,7 @@ dependencies:
 - beautifulsoup4=4.12.3
 - bleach=6.1.0
 - blosc=1.21.6
-- bokeh=3.4.2
+- bokeh=3.5.2
 - boltons=24.0.0
 - bottleneck=1.4.0
 - branca=0.7.2
@@ -58,16 +58,16 @@ dependencies:
 - brotlicffi=1.1.0.0
 - bzip2=1.0.8
 - c-ares=1.32.3
-- c-blosc2=2.15.0
-- ca-certificates=2024.7.4
+- c-blosc2=2.15.1
+- ca-certificates=2024.8.30
 - cached-property=1.5.2
 - cached_property=1.5.2
-- cads-api-client=1.1.0
+- cads-api-client=1.3.2
 - cairo=1.18.0
 - cartopy=0.23.0
-- cdsapi=0.7.0
-- certifi=2024.7.4
-- cffi=1.16.0
+- cdsapi=0.7.3
+- certifi=2024.8.30
+- cffi=1.17.1
 - cfgv=3.3.1
 - cfitsio=4.4.1
 - cftime=1.6.4
@@ -76,39 +76,39 @@ dependencies:
 - click-plugins=1.1.1
 - cligj=0.7.2
 - cloudpickle=3.0.0
-- coin-or-cbc=2.10.11
-- coin-or-cgl=0.60.7
-- coin-or-clp=1.17.8
-- coin-or-osi=0.108.10
-- coin-or-utils=2.11.11
-- coincbc=2.10.11
+- coin-or-cbc=2.10.12
+- coin-or-cgl=0.60.9
+- coin-or-clp=1.17.10
+- coin-or-osi=0.108.11
+- coin-or-utils=2.11.12
+- coincbc=2.10.12
 - colorama=0.4.6
 - colorcet=3.1.0
 - comm=0.2.2
-- conda=24.5.0
+- conda=24.7.1
 - conda-libmamba-solver=24.7.0
 - conda-package-handling=2.3.0
 - conda-package-streaming=0.10.0
 - configargparse=1.7
 - connection_pool=0.0.3
-- contextily=1.6.0
-- contourpy=1.2.1
+- contextily=1.6.2
+- contourpy=1.3.0
 - country_converter=1.2
 - cycler=0.12.1
 - cytoolz=0.12.3
-- dask=2024.7.1
-- dask-core=2024.7.1
-- dask-expr=1.1.9
+- dask=2024.9.0
+- dask-core=2024.9.0
+- dask-expr=1.1.14
 - datashader=0.16.3
 - datrie=0.8.2
 - dbus=1.13.6
-- debugpy=1.8.2
+- debugpy=1.8.5
 - decorator=5.1.1
 - defusedxml=0.7.1
 - deprecation=2.1.0
 - descartes=1.1.0
 - distlib=0.3.8
-- distributed=2024.7.1
+- distributed=2024.9.0
 - distro=1.9.0
 - docutils=0.21.2
 - dpath=2.2.0
@@ -117,10 +117,10 @@ dependencies:
 - entsoe-py=0.6.8
 - et_xmlfile=1.1.0
 - exceptiongroup=1.2.2
-- executing=2.0.1
-- expat=2.6.2
-- filelock=3.15.4
-- fiona=1.9.6
+- executing=2.1.0
+- expat=2.6.3
+- filelock=3.16.1
+- fiona=1.10.1
 - fmt=10.2.1
 - folium=0.17.0
 - font-ttf-dejavu-sans-mono=2.37
@@ -136,9 +136,9 @@ dependencies:
 - freexl=2.0.0
 - fribidi=1.0.10
 - frozendict=2.4.4
-- fsspec=2024.6.1
+- fsspec=2024.9.0
 - future=1.0.0
-- gdal=3.9.1
+- gdal=3.9.2
 - gdk-pixbuf=2.42.12
 - geographiclib=2.0
 - geojson-rewind=1.1.0
@@ -147,8 +147,8 @@ dependencies:
 - geopy=2.4.1
 - geos=3.12.2
 - geotiff=1.7.3
-- geoviews=1.12.0
-- geoviews-core=1.12.0
+- geoviews=1.13.0
+- geoviews-core=1.13.0
 - gettext=0.22.5
 - gettext-tools=0.22.5
 - gflags=2.2.2
@@ -161,9 +161,9 @@ dependencies:
 - glpk=5.0
 - gmp=6.3.0
 - graphite2=1.3.13
-- graphviz=11.0.0
-- gst-plugins-base=1.24.5
-- gstreamer=1.24.5
+- graphviz=12.0.0
+- gst-plugins-base=1.24.7
+- gstreamer=1.24.7
 - gtk2=2.24.33
 - gts=0.7.6
 - gurobi=11.0.3
@@ -175,21 +175,21 @@ dependencies:
 - holoviews=1.19.1
 - hpack=4.0.0
 - httpcore=1.0.5
-- httpx=0.27.0
+- httpx=0.27.2
 - humanfriendly=10.0
 - hvplot=0.10.0
 - hyperframe=6.0.1
-- icu=73.2
-- identify=2.6.0
-- idna=3.7
-- importlib-metadata=8.2.0
-- importlib_metadata=8.2.0
-- importlib_resources=6.4.0
+- icu=75.1
+- identify=2.6.1
+- idna=3.10
+- importlib-metadata=8.5.0
+- importlib_metadata=8.5.0
+- importlib_resources=6.4.5
 - inflate64=1.0.0
 - iniconfig=2.0.0
 - ipopt=3.13.2
 - ipykernel=6.29.5
-- ipython=8.26.0
+- ipython=8.27.0
 - isoduration=20.11.0
 - jedi=0.19.1
 - jinja2=3.1.4
@@ -202,17 +202,17 @@ dependencies:
 - jsonschema-specifications=2023.12.1
 - jsonschema-with-format-nongpl=4.23.0
 - jupyter-lsp=2.2.5
-- jupyter_client=8.6.2
+- jupyter_client=8.6.3
 - jupyter_core=5.7.2
 - jupyter_events=0.10.0
 - jupyter_server=2.14.2
 - jupyter_server_terminals=0.5.3
-- jupyterlab=4.2.4
+- jupyterlab=4.2.5
 - jupyterlab_pygments=0.3.0
 - jupyterlab_server=2.27.3
 - kealib=1.5.3
 - keyutils=1.6.1
-- kiwisolver=1.4.5
+- kiwisolver=1.4.7
 - krb5=1.21.3
 - lame=3.100
 - lcms2=2.16
@@ -237,36 +237,43 @@ dependencies:
 - libclang13=18.1.8
 - libcrc32c=1.1.2
 - libcups=2.3.3
-- libcurl=8.9.0
-- libdeflate=1.20
+- libcurl=8.10.1
+- libdeflate=1.21
+- libdrm=2.4.123
 - libedit=3.1.20191231
+- libegl=1.7.0
 - libev=4.33
 - libevent=2.1.12
-- libexpat=2.6.2
+- libexpat=2.6.3
 - libffi=3.4.2
 - libflac=1.4.3
+- libgcc=14.1.0
 - libgcc-ng=14.1.0
 - libgcrypt=1.11.0
 - libgd=2.3.3
-- libgdal=3.9.1
-- libgdal-core=3.9.1
-- libgdal-fits=3.9.1
-- libgdal-grib=3.9.1
-- libgdal-hdf4=3.9.1
-- libgdal-hdf5=3.9.1
-- libgdal-jp2openjpeg=3.9.1
-- libgdal-kea=3.9.1
-- libgdal-netcdf=3.9.1
-- libgdal-pdf=3.9.1
-- libgdal-pg=3.9.1
-- libgdal-postgisraster=3.9.1
-- libgdal-tiledb=3.9.1
-- libgdal-xls=3.9.1
+- libgdal=3.9.2
+- libgdal-core=3.9.2
+- libgdal-fits=3.9.2
+- libgdal-grib=3.9.2
+- libgdal-hdf4=3.9.2
+- libgdal-hdf5=3.9.2
+- libgdal-jp2openjpeg=3.9.2
+- libgdal-kea=3.9.2
+- libgdal-netcdf=3.9.2
+- libgdal-pdf=3.9.2
+- libgdal-pg=3.9.2
+- libgdal-postgisraster=3.9.2
+- libgdal-tiledb=3.9.2
+- libgdal-xls=3.9.2
 - libgettextpo=0.22.5
 - libgettextpo-devel=0.22.5
+- libgfortran=14.1.0
 - libgfortran-ng=14.1.0
 - libgfortran5=14.1.0
+- libgl=1.7.0
 - libglib=2.80.3
+- libglvnd=1.7.0
+- libglx=1.7.0
 - libgomp=14.1.0
 - libgoogle-cloud=2.26.0
 - libgoogle-cloud-storage=2.26.0
@@ -280,8 +287,8 @@ dependencies:
 - libllvm14=14.0.6
 - libllvm15=15.0.7
 - libllvm18=18.1.8
-- libmamba=1.5.8
-- libmambapy=1.5.8
+- libmamba=1.5.9
+- libmambapy=1.5.9
 - libnetcdf=4.9.2
 - libnghttp2=1.58.0
 - libnsl=2.0.1
@@ -289,27 +296,28 @@ dependencies:
 - libopenblas=0.3.27
 - libopus=1.3.1
 - libparquet=17.0.0
-- libpng=1.6.43
-- libpq=16.3
+- libpciaccess=0.18
+- libpng=1.6.44
+- libpq=16.4
 - libprotobuf=4.25.3
 - libre2-11=2023.09.01
-- librsvg=2.58.2
+- librsvg=2.58.4
 - librttopo=1.1.0
 - libsndfile=1.2.2
-- libsodium=1.0.18
+- libsodium=1.0.20
 - libsolv=0.7.30
 - libspatialindex=2.0.0
 - libspatialite=5.1.0
-- libsqlite=3.46.0
+- libsqlite=3.46.1
 - libssh2=1.11.0
+- libstdcxx=14.1.0
 - libstdcxx-ng=14.1.0
-- libsystemd0=255
+- libsystemd0=256.6
 - libthrift=0.19.0
 - libtiff=4.6.0
 - libutf8proc=2.8.0
 - libuuid=2.38.1
 - libvorbis=1.3.7
-- libwebp=1.4.0
 - libwebp-base=1.4.0
 - libxcb=1.16
 - libxcrypt=4.4.36
@@ -322,34 +330,34 @@ dependencies:
 - linopy=0.3.11
 - llvmlite=0.43.0
 - locket=1.0.0
-- lxml=5.2.2
+- lxml=5.3.0
 - lz4=4.3.3
 - lz4-c=1.9.4
 - lzo=2.10
-- mamba=1.5.8
-- mapclassify=2.7.0
+- mamba=1.5.9
+- mapclassify=2.8.0
 - markdown=3.6
 - markdown-it-py=3.0.0
 - markupsafe=2.1.5
 - matplotlib=3.5.2
 - matplotlib-base=3.5.2
 - matplotlib-inline=0.1.7
-- mdit-py-plugins=0.4.1
+- mdit-py-plugins=0.4.2
 - mdurl=0.1.2
 - memory_profiler=0.61.0
-- menuinst=2.1.1
+- menuinst=2.1.2
 - mercantile=1.2.1
 - metis=5.1.0
 - minizip=4.0.7
 - mistune=3.0.2
 - mpg123=1.32.6
-- msgpack-python=1.0.8
+- msgpack-python=1.1.0
 - multipledispatch=0.6.0
 - multiurl=0.3.1
 - multivolumefile=0.2.3
 - munkres=1.1.4
-- mysql-common=8.3.0
-- mysql-libs=8.3.0
+- mysql-common=9.0.1
+- mysql-libs=9.0.1
 - nbclient=0.10.0
 - nbconvert-core=7.16.4
 - nbformat=5.10.4
@@ -361,19 +369,19 @@ dependencies:
 - nomkl=1.0
 - notebook-shim=0.2.4
 - nspr=4.35
-- nss=3.102
+- nss=3.104
 - numba=0.60.0
 - numexpr=2.10.0
 - numpy=1.26.4
 - openjpeg=2.5.2
-- openpyxl=3.1.4
-- openssl=3.3.1
+- openpyxl=3.1.5
+- openssl=3.3.2
 - orc=2.0.1
 - overrides=7.7.0
 - packaging=24.1
 - pandas=2.2.2
 - pandocfilters=1.5.0
-- panel=1.4.4
+- panel=1.5.0
 - pango=1.54.0
 - param=2.1.1
 - parso=0.8.4
@@ -383,21 +391,21 @@ dependencies:
 - pexpect=4.9.0
 - pickleshare=0.7.5
 - pillow=10.4.0
-- pip=24.0
+- pip=24.2
 - pixman=0.43.2
 - pkgutil-resolve-name=1.3.10
 - plac=1.4.3
-- platformdirs=4.2.2
+- platformdirs=4.3.6
 - pluggy=1.5.0
 - ply=3.11
-- polars=1.2.1
-- poppler=24.07.0
+- polars=1.7.1
+- poppler=24.08.0
 - poppler-data=0.4.12
-- postgresql=16.3
-- powerplantmatching=0.5.15
-- pre-commit=3.7.1
-- progressbar2=4.4.2
-- proj=9.4.1
+- postgresql=16.4
+- powerplantmatching=0.6.0
+- pre-commit=3.8.0
+- progressbar2=4.5.0
+- proj=9.5.0
 - prometheus_client=0.20.0
 - prompt-toolkit=3.0.47
 - protobuf=4.25.3
@@ -408,7 +416,7 @@ dependencies:
 - pulseaudio-client=17.0
 - pure_eval=0.2.3
 - py-cpuinfo=9.0.0
-- py7zr=0.21.1
+- py7zr=0.22.0
 - pyarrow=17.0.0
 - pyarrow-core=17.0.0
 - pyarrow-hotfix=0.6
@@ -422,8 +430,8 @@ dependencies:
 - pydoe2=1.3.0
 - pygments=2.18.0
 - pyogrio=0.9.0
-- pyomo=6.7.3
-- pyparsing=3.1.2
+- pyomo=6.8.0
+- pyparsing=3.1.4
 - pyppmd=1.1.0
 - pyproj=3.6.1
 - pypsa=0.24.0
@@ -431,8 +439,8 @@ dependencies:
 - pyqt5-sip=12.12.2
 - pyshp=2.3.1
 - pysocks=1.7.1
-- pytables=3.9.2
-- pytest=8.3.2
+- pytables=3.10.1
+- pytest=8.3.3
 - python=3.10.14
 - python-dateutil=2.9.0
 - python-fastjsonschema=2.20.0
@@ -440,13 +448,13 @@ dependencies:
 - python-tzdata=2024.1
 - python-utils=3.8.2
 - python_abi=3.10
-- pytz=2024.1
-- pyviz_comms=3.0.2
-- pyyaml=6.0.1
-- pyzmq=26.0.3
-- pyzstd=0.16.0
+- pytz=2024.2
+- pyviz_comms=3.0.3
+- pyyaml=6.0.2
+- pyzmq=26.2.0
+- pyzstd=0.16.1
 - qt-main=5.15.8
-- rasterio=1.3.10
+- rasterio=1.3.11
 - re2=2023.09.01
 - readline=8.2
 - referencing=0.35.1
@@ -458,18 +466,18 @@ dependencies:
 - rfc3339-validator=0.1.4
 - rfc3986-validator=0.1.1
 - rioxarray=0.17.0
-- rpds-py=0.19.1
+- rpds-py=0.20.0
 - rtree=1.3.0
 - ruamel.yaml=0.17.26
 - ruamel.yaml.clib=0.2.8
 - s2n=1.4.17
-- scikit-learn=1.5.1
-- scipy=1.14.0
+- scikit-learn=1.5.2
+- scipy=1.14.1
 - seaborn=0.13.2
 - seaborn-base=0.13.2
 - send2trash=1.8.3
-- setuptools=71.0.4
-- shapely=2.0.5
+- setuptools=73.0.1
+- shapely=2.0.6
 - sip=6.7.12
 - six=1.16.0
 - smart_open=7.0.4
@@ -481,9 +489,9 @@ dependencies:
 - sortedcontainers=2.4.0
 - soupsieve=2.5
 - spdlog=1.13.0
-- sqlite=3.46.0
+- sqlite=3.46.1
 - stack_data=0.6.2
-- statsmodels=0.14.2
+- statsmodels=0.14.3
 - stopit=1.1.2
 - tabulate=0.9.0
 - tblib=3.0.0
@@ -499,14 +507,14 @@ dependencies:
 - toolz=0.12.1
 - toposort=1.10
 - tornado=6.4.1
-- tqdm=4.66.4
+- tqdm=4.66.5
 - traitlets=5.14.3
-- truststore=0.8.0
-- types-python-dateutil=2.9.0.20240316
+- truststore=0.9.2
+- types-python-dateutil=2.9.0.20240906
 - typing-extensions=4.12.2
 - typing_extensions=4.12.2
 - typing_utils=0.1.0
-- tzcode=2024a
+- tzcode=2024b
 - tzdata=2024a
 - uc-micro-py=1.0.3
 - ukkonen=1.0.1
@@ -514,14 +522,14 @@ dependencies:
 - unidecode=1.3.8
 - uri-template=1.3.0
 - uriparser=0.9.8
-- urllib3=2.2.2
-- validators=0.33.0
-- virtualenv=20.26.3
+- urllib3=2.2.3
+- validators=0.34.0
+- virtualenv=20.26.5
 - wcwidth=0.2.13
-- webcolors=24.6.0
+- webcolors=24.8.0
 - webencodings=0.5.1
 - websocket-client=1.8.0
-- wheel=0.43.0
+- wheel=0.44.0
 - wrapt=1.16.0
 - xarray=2023.11.0
 - xcb-util=0.4.1
@@ -540,11 +548,12 @@ dependencies:
 - xorg-libxdmcp=1.1.3
 - xorg-libxext=1.3.4
 - xorg-libxrender=0.9.11
+- xorg-libxxf86vm=1.1.5
 - xorg-renderproto=0.11.1
 - xorg-xextproto=7.3.0
 - xorg-xf86vidmodeproto=2.3.1
 - xorg-xproto=7.0.31
-- xyzservices=2024.6.0
+- xyzservices=2024.9.0
 - xz=5.2.6
 - yaml=0.2.5
 - yaml-cpp=0.8.0
@@ -552,9 +561,9 @@ dependencies:
 - zeromq=4.3.5
 - zict=3.0.0
 - zipfile-deflate64=0.2.0
-- zipp=3.19.2
+- zipp=3.20.2
 - zlib=1.3.1
-- zlib-ng=2.2.1
+- zlib-ng=2.2.2
 - zstandard=0.23.0
 - zstd=1.5.6
 - pip:
@@ -563,5 +572,5 @@ dependencies:
   - googledrivedownloader==0.4
   - highspy==1.7.2
   - numpoly==1.2.13
-  - tsam==2.3.1
+  - tsam==2.3.3
   - vresutils==0.3.2.dev11+g150c1be