01_download_data.ipynb

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    "<font style=\"font-family:roboto;color:#455e6c;font-size:18px;text-align:justify\"> <b> Define at least one reconstructed and ranged atom probe dataset <br> </b> </font>\n",
    "Collecting or creating reconstructed and ranged atom probe tomography datasets is the first step of this data analysis workflow. All commonly used file formats of the atom probe community are supported thanks to the [ifes_apt_tc_data_modeling](https://www.github.com/atomprobe-tc/ifes_apt_tc_data_modeling/tree/main/ifes_apt_tc_data_modeling) library working in the backend of both paraprobe-toolbox and CompositionSpace. Here, we show how to use a dataset from the global atom probe community that is small enough in the number of atoms to run on almost every system. The example provides a reconstructed and ranged dataset of a silicon specimen that is typically used as a holder for typical atom probe specimens. [The dataset was made public as a part of the APAV Python library by J. Smith et al.](https://gitlab.com/jesseds/apav/-/tree/JOSS/apav/tests).  "
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      "--2025-01-28 09:20:55--  https://gitlab.com/jesseds/apav/-/raw/JOSS/apav/tests/Si.RRNG\n",
      "Resolving gitlab.com (gitlab.com)... 2606:4700:90:0:f22e:fbec:5bed:a9b9, 172.65.251.78\n",
      "Connecting to gitlab.com (gitlab.com)|2606:4700:90:0:f22e:fbec:5bed:a9b9|:443... connected.\n",
      "HTTP request sent, awaiting response... 200 OK\n",
      "Length: 1444 (1.4K) [text/plain]\n",
      "Saving to: ‘Si.RRNG’\n",
      "\n",
      "Si.RRNG             100%[===================>]   1.41K  --.-KB/s    in 0s      \n",
      "\n",
      "2025-01-28 09:20:55 (67.5 MB/s) - ‘Si.RRNG’ saved [1444/1444]\n",
      "\n",
      "--2025-01-28 09:20:55--  https://gitlab.com/jesseds/apav/-/raw/JOSS/apav/tests/Si.RNG\n",
      "Resolving gitlab.com (gitlab.com)... 2606:4700:90:0:f22e:fbec:5bed:a9b9, 172.65.251.78\n",
      "Connecting to gitlab.com (gitlab.com)|2606:4700:90:0:f22e:fbec:5bed:a9b9|:443... connected.\n",
      "HTTP request sent, awaiting response... 200 OK\n",
      "Length: 1336 (1.3K) [text/plain]\n",
      "Saving to: ‘Si.RNG’\n",
      "\n",
      "Si.RNG              100%[===================>]   1.30K  --.-KB/s    in 0s      \n",
      "\n",
      "2025-01-28 09:20:55 (55.9 MB/s) - ‘Si.RNG’ saved [1336/1336]\n",
      "\n",
      "--2025-01-28 09:20:55--  https://gitlab.com/jesseds/apav/-/raw/JOSS/apav/tests/Si.apt\n",
      "Resolving gitlab.com (gitlab.com)... 2606:4700:90:0:f22e:fbec:5bed:a9b9, 172.65.251.78\n",
      "Connecting to gitlab.com (gitlab.com)|2606:4700:90:0:f22e:fbec:5bed:a9b9|:443... connected.\n",
      "HTTP request sent, awaiting response... 200 OK\n",
      "Length: 37810040 (36M) [application/octet-stream]\n",
      "Saving to: ‘Si.apt’\n",
      "\n",
      "Si.apt              100%[===================>]  36.06M  1.91MB/s    in 19s     \n",
      "\n",
      "2025-01-28 09:21:14 (1.88 MB/s) - ‘Si.apt’ saved [37810040/37810040]\n",
      "\n",
      "--2025-01-28 09:21:15--  https://gitlab.com/jesseds/apav/-/raw/JOSS/apav/tests/Si.pos\n",
      "Resolving gitlab.com (gitlab.com)... 2606:4700:90:0:f22e:fbec:5bed:a9b9, 172.65.251.78\n",
      "Connecting to gitlab.com (gitlab.com)|2606:4700:90:0:f22e:fbec:5bed:a9b9|:443... connected.\n",
      "200 OKequest sent, awaiting response... \n",
      "Length: 15123376 (14M) [application/octet-stream]\n",
      "Saving to: ‘Si.pos’\n",
      "\n",
      "Si.pos              100%[===================>]  14.42M  1.90MB/s    in 7.6s    \n",
      "\n",
      "2025-01-28 09:21:22 (1.91 MB/s) - ‘Si.pos’ saved [15123376/15123376]\n",
      "\n"
     ]
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   "source": [
    "! wget https://gitlab.com/jesseds/apav/-/raw/JOSS/apav/tests/Si.RRNG\n",
    "! wget https://gitlab.com/jesseds/apav/-/raw/JOSS/apav/tests/Si.RNG\n",
    "! wget https://gitlab.com/jesseds/apav/-/raw/JOSS/apav/tests/Si.apt\n",
    "! wget https://gitlab.com/jesseds/apav/-/raw/JOSS/apav/tests/Si.pos"
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