From 7add653842bf06bfe4576c652c33c394383e416c Mon Sep 17 00:00:00 2001 From: dhananjaya93 Date: Mon, 9 Dec 2024 22:39:32 +0100 Subject: [PATCH] converted python scripts to javascript --- base_script.py | 2 +- index.html | 1094 ++++++++++++++++++++++++++++++++++++++++++++++++ js_script.html | 139 ++++++ list.txt | 135 ++++++ 4 files changed, 1369 insertions(+), 1 deletion(-) create mode 100644 index.html create mode 100644 js_script.html create mode 100644 list.txt diff --git a/base_script.py b/base_script.py index 22aa0a6..01b6405 100644 --- a/base_script.py +++ b/base_script.py @@ -80,7 +80,7 @@ def generate_html(papers, output_file='index.html'): file.write(rendered_html) # Processing DOIs -dois = [preprocess_doi(doi) for doi in open('doi.txt').read().splitlines()] +dois = [preprocess_doi(doi) for doi in open('list.txt').read().splitlines()] papers = [] # Archive names diff --git a/index.html b/index.html new file mode 100644 index 0000000..79a2052 --- /dev/null +++ b/index.html @@ -0,0 +1,1094 @@ + + + + + + + Paper Directory + + + +

Paper Directory

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DOITitleCommunity ArchiveAADR ArchiveMinotaur Archive
10.1038/s41586-018-0094-2137 ancient human genomes from across the Eurasian steppes✘✘✘
10.1016/j.cub.2017.09.03040,000-Year-Old Individual from Asia Provides Insight into Early Population Structure in Eurasia✘✘✘
10.1093/molbev/msv181A Common Genetic Origin for Early Farmers from Mediterranean Cardial and Central European LBK Cultures✘✘✘
10.1016/j.cell.2020.10.015A Dynamic 6,000-Year Genetic History of Eurasia’s Eastern Steppe✔✘✘
10.1016/j.ajhg.2020.05.008A Genetic History of the Near East from an aDNA Time Course Sampling Eight Points in the Past 4,000 Years✘✘✘
10.1126/science.1224344A High-Coverage Genome Sequence from an Archaic Denisovan Individual✘✘✘
10.1080/00758914.2017.1368204A Late Bronze Age II clay coffin from Tel Shaddud in the Central Jezreel Valley, Israel: context and historical implications✘✘✘
10.1038/s41586-020-03053-2A genetic history of the pre-contact Caribbean✘✘✘
10.1038/s41598-018-33067-wA genomic Neolithic time transect of hunter-farmer admixture in central Poland✘✘✘
10.1038/nature15393A global reference for human genetic variation✘✘✘
10.1073/pnas.2004944117A high-coverage Neandertal genome from Chagyrskaya Cave✔✘✘
10.1126/science.aao1887A high-coverage Neandertal genome from Vindija Cave in Croatia✘✘✘
10.1101/gr.267534.120A minimally destructive protocol for DNA extraction from ancient teeth✔✘✘
10.1038/jhg.2016.110A partial nuclear genome of the Jomons who lived 3000 years ago in Fukushima, Japan✘✘✘
10.1038/nature14558An early modern human from Romania with a recent Neanderthal ancestor✘✘✘
10.1038/ncomms14615Ancestry and demography and descendants of Iron Age nomads of the Eurasian Steppe✘✘✘
10.1534/genetics.112.145037Ancient Admixture in Human History✘✘✘
10.1093/molbev/msz267Ancient DNA Reconstructs the Genetic Legacies of Precontact Puerto Rico Communities✘✘✘
10.1038/s41467-018-05649-9Ancient DNA from Chalcolithic Israel reveals the role of population mixture in cultural transformation✘✘✘
10.1073/pnas.2022112118Ancient DNA from Guam and the peopling of the Pacific✔✘✘
10.1126/science.aaw6275Ancient DNA reveals a multistep spread of the first herders into sub-Saharan Africa✔✘✘
10.1038/s42003-020-01372-8Ancient DNA reveals monozygotic newborn twins from the Upper Palaeolithic✘✘✘
10.1126/science.aad2879Ancient Ethiopian genome reveals extensive Eurasian admixture in Eastern Africa✘✘✘
10.1038/s41586-020-1929-1Ancient West African foragers in the context of African population history✘✘✘
10.1126/science.aat3188Ancient genomes document multiple waves of migration in Southeast Asian prehistory✘✘✘
10.1073/pnas.1800851115Ancient genomes from North Africa evidence prehistoric migrations to the Maghreb from both the Levant and Europe✘✘✘
10.1038/s41559-019-0871-9Ancient genomes indicate population replacement in Early Neolithic Britain✘✘✘
10.1073/pnas.1509851112Ancient genomes link early farmers from Atapuerca in Spain to modern-day Basques✘✘✘
10.1038/s41598-021-89090-xAncient genomes provide insights into family structure and the heredity of social status in the early Bronze Age of southeastern Europe✘✘✘
10.1126/sciadv.aaz0183Ancient genomes reveal complex patterns of population movement, interaction, and replacement in sub-Saharan Africa✘✘✘
10.1126/science.aao1807Ancient genomes show social and reproductive behavior of early Upper Paleolithic foragers✘✘✘
10.1126/sciadv.aat4457Ancient genomes suggest the eastern Pontic-Caspian steppe as the source of western Iron Age nomads✘✘✘
10.1126/sciadv.abe4414Ancient genomic time transect from the Central Asian Steppe unravels the history of the Scythians✘✘✘
10.1038/nature08835Ancient human genome sequence of an extinct Palaeo-Eskimo✘✘✘
10.1038/nature13673Ancient human genomes suggest three ancestral populations for present-day Europeans✘✘✘
10.1126/science.aar6851Ancient human parallel lineages within North America contributed to a coastal expansion✘✘✘
10.1073/pnas.1620410114Ancient individuals from the North American Northwest Coast reveal 10,000 years of regional genetic continuity✘✘✘
10.1016/j.cell.2021.02.040Archaeogenomic distinctiveness of the Isthmo-Colombian area✔✘✘
10.1038/ncomms14115Archaeogenomic evidence reveals prehistoric matrilineal dynasty✘✘✘
10.1016/j.ajhg.2017.06.013Continuity and Admixture in the Last Five Millennia of Levantine History from Ancient Canaanite and Present-Day Lebanese Genome Sequences✘✘✘
10.1126/science.abc1166Denisovan ancestry and population history of early East Asians✔✘✘
10.1038/nature12960Derived immune and ancestral pigmentation alleles in a 7,000-year-old Mesolithic European✘✘✘
10.1126/sciadv.abi6941Dynamic changes in genomic and social structures in third millennium BCE central Europe✔✘✘
10.1016/j.cub.2021.03.078Early Alpine occupation backdates westward human migration in Late Glacial Europe✔✘✘
10.1126/science.aaf7943Early Neolithic genomes from the eastern Fertile Crescent✘✘✘
10.1038/s41586-023-06334-8Early contact between late farming and pastoralist societies in southeastern Europe✔✘✘
10.1073/pnas.1523951113Early farmers from across Europe directly descended from Neolithic Aegeans✘✘✘
10.1126/science.aav2621Early human dispersals within the Americas✘✘✘
10.1016/j.cub.2017.06.022Extensive Farming in Estonia Started through a Sex-Biased Migration from the Steppe✘✘✘
10.1073/pnas.1717762115Four millennia of Iberian biomolecular prehistory illustrate the impact of prehistoric migrations at the far end of Eurasia✘✘✘
10.1016/j.cub.2022.11.036Genetic admixture and language shift in the medieval Volga-Oka interfluve✔✘✔
10.1126/sciadv.abd6535Genetic ancestry changes in Stone to Bronze Age transition in the East European plain✔✘✔
10.1038/s41467-020-14523-6Genetic history from the Middle Neolithic to present on the Mediterranean island of Sardinia✘✘✘
10.1038/nature23310Genetic origins of the Minoans and Mycenaeans✘✘✘
10.1038/ncomms6257Genome flux and stasis in a five millennium transect of European prehistory✘✘✘
10.1016/j.cub.2021.04.045Genome of Peştera Muierii skull shows high diversity and low mutational load in pre-glacial Europe✔✘✘
10.1038/s41586-021-03823-6Genome of a middle Holocene hunter-gatherer from Wallacea✔✘✔
10.1038/nature13810Genome sequence of a 45,000-year-old modern human from western Siberia✘✘✘
10.1371/journal.pone.0247332Genome-wide analysis of nearly all the victims of a 6200 year old massacre✔✘✘
10.1038/nature16152Genome-wide patterns of selection in 230 ancient Eurasians✘✘✘
10.1016/j.cub.2017.09.059Genomic Analyses of Pre-European Conquest Human Remains from the Canary Islands Reveal Close Affinity to Modern North Africans✘✘✘
10.1126/science.1253448Genomic Diversity and Admixture Differs for Stone-Age Scandinavian Foragers and Farmers✘✘✘
10.1016/j.cub.2015.12.019Genomic Evidence Establishes Anatolia as the Source of the European Neolithic Gene Pool✘✘✘
10.1371/journal.pone.0244872Genomic Steppe ancestry in skeletons from the Neolithic Single Grave Culture in Denmark✔✘✘
10.1038/ng.3621Genomic analysis of Andamanese provides insights into ancient human migration into Asia and adaptation✘✘✘
10.1016/j.cub.2018.06.053Genomic and Strontium Isotope Variation Reveal Immigration Patterns in a Viking Age Town✘✘✘
10.1126/science.aab3884Genomic evidence for the Pleistocene and recent population history of Native Americans✘✘✘
10.1126/science.aba8697Genomic insights into the early peopling of the Caribbean✘✘✘
10.1038/s41586-021-03336-2Genomic insights into the formation of human populations in East Asia✘✘✘
10.1073/pnas.1715688115Genomic insights into the origin and diversification of late maritime hunter-gatherers from the Chilean Patagonia✘✘✘
10.1038/nature19310Genomic insights into the origin of farming in the ancient Near East✘✘✘
10.1038/nature19844Genomic insights into the peopling of the Southwest Pacific✘✘✘
10.1038/s41467-023-44328-2Genomic portrait and relatedness patterns of the Iron Age Log Coffin culture in northwestern Thailand✔✘✘
10.1038/ncomms10326Genomic signals of migration and continuity in Britain before the Anglo-Saxons✘✘✘
10.1126/science.aaa0114Genomic structure in Europeans dating back at least 36,200 years✘✘✘
10.1016/j.cub.2020.12.015Heterogeneous Hunter-Gatherer and Steppe-Related Ancestries in Late Neolithic and Bell Beaker Genomes from Present-Day France✔✘✘
10.1126/sciadv.abc4587Human population dynamics and + Yersinia pestis + in ancient northeast Asia✘✘✘
10.1038/nature04072Initial sequence of the chimpanzee genome and comparison with the human genome✘✘✘
10.1126/science.aay5012Insights into human genetic variation and population history from 929 diverse genomes✘✘✘
10.1038/ncomms10408Iron Age and Anglo-Saxon genomes from East England reveal British migration history✘✘✘
10.1038/s41559-018-0498-2Language continuity despite population replacement in Remote Oceania✘✘✘
10.1126/science.aae0344Long-read sequence assembly of the gorilla genome✘✘✘
10.1073/pnas.1520844113Long-term genetic stability and a high-altitude East Asian origin for the peoples of the high valleys of the Himalayan arc✘✘✘
10.1016/j.cub.2020.08.033Low Prevalence of Lactase Persistence in Bronze Age Europe Indicates Ongoing Strong Selection over the Last 3,000 Years✔✘✘
10.1371/journal.pbio.1001091Modernizing Reference Genome Assemblies✘✘✘
10.1073/pnas.2026132118Multiple migrations to the Philippines during the last 50,000 years✔✘✘
10.1073/pnas.1518445113Neolithic and Bronze Age migration to Ireland and establishment of the insular Atlantic genome✘✘✘
10.1038/ncomms1701New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing✘✘✘
10.1016/j.cub.2020.04.002Origin and Health Status of First-Generation Africans from Early Colonial Mexico✘✘✘
10.1073/pnas.1716839115Origins and genetic legacies of the Caribbean Taino✘✘✘
10.1038/s41586-019-1251-yPalaeo-Eskimo genetic ancestry and the peopling of Chukotka and North America✔✘✘
10.1016/j.cub.2017.05.023Paleogenomic Evidence for Multi-generational Mixing between Neolithic Farmers and Mesolithic Hunter-Gatherers in the Lower Danube Basin✘✘✘
10.1038/nature24476Parallel palaeogenomic transects reveal complex genetic history of early European farmers✘✘✘
10.1016/j.cub.2018.02.051Population Turnover in Remote Oceania Shortly after Initial Settlement✘✘✘
10.1073/pnas.1719880115Population genomic analysis of elongated skulls reveals extensive female-biased immigration in Early Medieval Bavaria✘✘✘
10.1038/nature14507Population genomics of Bronze Age Eurasia✘✘✘
10.1371/journal.pbio.2003703Population genomics of Mesolithic Scandinavia: Investigating early postglacial migration routes and high-latitude adaptation✘✘✘
10.1038/s41586-020-2688-8Population genomics of the Viking world✘✘✔
10.1016/j.cell.2017.08.049Reconstructing Prehistoric African Population Structure✘✘✘
10.1038/s41598-021-94932-9Reconstructing genetic histories and social organisation in Neolithic and Bronze Age Croatia✘✘✘
10.1038/nature26151Reconstructing the genetic history of late Neanderthals✘✘✘
10.1126/science.aao6266Southern African ancient genomes estimate modern human divergence to 350,000 to 260,000 years ago✘✘✘
10.1038/nature25173Terminal Pleistocene Alaskan genome reveals first founding population of Native Americans✘✘✘
10.1002/ajpa.23312Testing support for the northern and southern dispersal routes out of Africa: an analysis of Levantine and southern Arabian populations✘✘✘
10.1101/2023.04.06.535797The Allen Ancient DNA Resource (AADR): A curated compendium of ancient human genomes✘✘✘
10.1038/s41586-022-05247-2The Anglo-Saxon migration and the formation of the early English gene pool✔✘✘
10.1038/nature25738The Beaker phenomenon and the genomic transformation of northwest Europe✘✘✘
10.1016/j.cub.2016.07.057The Demographic Development of the First Farmers in Anatolia✘✘✘
10.1002/ajpa.24079The Neolithic Pitted Ware culture foragers were culturally but not genetically influenced by the Battle Axe culture herders✘✘✘
10.1016/j.cub.2016.12.060The Neolithic Transition in the Baltic Was Not Driven by Admixture with Early European Farmers✘✘✘
10.1038/nature14625The ancestry and affiliations of Kennewick Man✘✘✘
10.1038/nature12886The complete genome sequence of a Neanderthal from the Altai Mountains✘✘✘
10.1016/j.cell.2021.04.040The deep population history of northern East Asia from the Late Pleistocene to the Holocene✔✘✘
10.1126/science.aar7711The first horse herders and the impact of early Bronze Age steppe expansions into Asia✘✘✘
10.1126/science.aat7487The formation of human populations in South and Central Asia✔✘✘
10.1038/nature17993The genetic history of Ice Age Europe✘✘✘
10.1038/s41559-019-0878-2The genetic history of admixture across inner Eurasia✔✘✘
10.1038/ncomms2140The genetic prehistory of southern Africa✘✘✘
10.1126/sciadv.aau4921The genetic prehistory of the Andean highlands 7000 years BP though European contact✘✘✘
10.1126/science.1255832The genetic prehistory of the New World Arctic✘✘✘
10.1038/nature13025The genome of a Late Pleistocene human from a Clovis burial site in western Montana✘✘✘
10.1038/s41586-018-0455-xThe genome of the offspring of a Neanderthal mother and a Denisovan father✘✘✘
10.1038/nature25778The genomic history of southeastern Europe✘✘✘
10.1016/j.cell.2021.03.039The genomic history of the Aegean palatial civilizations✔✘✘
10.1126/science.aav4040The genomic history of the Iberian Peninsula over the past 8000 years✔✘✘
10.1371/journal.pgen.1006852The population genomics of archaeological transition in west Iberia: Investigation of ancient substructure using imputation and haplotype-based methods✘✘✘
10.1126/science.aat3628The prehistoric peopling of Southeast Asia✘✘✘
10.1038/s41559-020-1102-0The spread of steppe and Iranian-related ancestry in the islands of the western Mediterranean✘✘✘
10.1016/j.cub.2014.09.078Two ancient human genomes reveal Polynesian ancestry among the indigenous Botocudos of Brazil✘✘✘
10.1038/s41467-018-06024-4Understanding 6th-century barbarian social organization and migration through paleogenomics✘✘✘
10.1038/nature12736Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans✘✘✘
10.1038/ncomms9912Upper Palaeolithic genomes reveal deep roots of modern Eurasians✘✘✘
10.1016/j.cub.2021.03.050Variable kinship patterns in Neolithic Anatolia revealed by ancient genomes✔✘✘
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