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GO-CAM cell integrity MAPK cascade (GO:0000196) #3773

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ValWood opened this issue Nov 14, 2024 · 0 comments
Open
3 tasks

GO-CAM cell integrity MAPK cascade (GO:0000196) #3773

ValWood opened this issue Nov 14, 2024 · 0 comments
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@ValWood
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ValWood commented Nov 14, 2024

Pathway label:
cell integrity MAPK cascade (GO:0000196)

Noctua:
http://noctua.geneontology.org/workbench/noctua-visual-pathway-editor/?model_id=gomodel%3A671ae02600003478

Pathway summary:

GO CAM QUICK cell integrity pathway

Annotations in PomBase:
https://www.pombase.org/results/from/id/f9619d0a-072a-4d16-a206-2eb66c211b59

MIssing from model:

SPCC757.09c | rnc1 | KH domain RNA-binding protein Rnc1
SPAC4F10.17 |   | plasma membrane and mitochondrial outer membrane, implicated in cell integrity signaling, conserved fungal protein
SPAC11G7.01 | mtl2 | plasma membrane-associated serine-rich cell wall sensor Mtl2
SPAC6B12.15 | cpc2 | ribosome-associated signalling scaffold, receptor of activated C kinase (RACK1) ortholog Cpc2

TO DO

  • Look into more precise localizations
  • integrate missing entities
  • NOCTUA QUESTION How to add "response to" different conditions (can't put in "during" as this is restricted to phase)
@ValWood ValWood self-assigned this Nov 14, 2024
@ValWood ValWood added the GO-CAM label Nov 14, 2024
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