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Open datasets with physio data #19

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tsalo opened this issue Jan 25, 2021 · 4 comments
Open

Open datasets with physio data #19

tsalo opened this issue Jan 25, 2021 · 4 comments

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@tsalo
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tsalo commented Jan 25, 2021

This stems from #11 (comment). I was thinking we can use this issue to build a list of datasets with physio data.

One good start is searching "physio" in OpenNeuro. The "available modalities" field shows when a study has physio data.

@eurunuela
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I believe I created a blank page for physio data in #16

Should we make it a table of some kind? Maybe with name, link, citation, and brief description?

@tsalo
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tsalo commented Jan 25, 2021

I didn't realize you had already started on it!

I think that would be amazing. There are definitely more datasets with physio than those with multi-echo, so a bulleted list like we have in tedana's docs probably isn't as appropriate.

EDIT: Actually, what about a rendered Google Sheet like the one Logan manages for multi-echo papers? That way we don't need to open a PR to update the list.

@eurunuela
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eurunuela commented Jan 25, 2021

I didn't realize you had already started on it!

Yeah... it's been there for a couple of months now I believe. I'm guessing folks are either busy or focused on phys2denoise.

I think that would be amazing. There are definitely more datasets with physio than those with multi-echo, so a bulleted list like we have in tedana's docs probably isn't as appropriate.

Ideally, we could have a Google Spreadsheet embedded into the page. I think that would be the most comfortable solution for anyone willing to contribute. And it should be pretty straightforward as markdown can render HTML code.

Edit: re your edit: you read my mind!

@eurunuela
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I've just pushed a commit to #16 with the embedded spreadsheet. The spreadsheet is here: https://docs.google.com/spreadsheets/d/1i4CMTsH1JWHS8n0vY_QAYbHN_TMAT8z4tOFyzOHlSgo/edit?usp=sharing

It is supposed to update the website every time the sheet is updated.

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