From 54451b2182c3317d79e0b612548fe2f16531aeb8 Mon Sep 17 00:00:00 2001
From: Daphne Grasselly <daphne.grasselly@roche.com>
Date: Tue, 5 Sep 2023 17:46:58 +0200
Subject: [PATCH] add templates

---
 .github/workflows/templates.yml | 19 +++++++++++++++++++
 inst/templates/ad_adbcva.R      | 11 ++++++++---
 inst/templates/ad_adoe.R        | 13 +++++++++----
 inst/templates/ad_advfq.R       | 11 +++++++++--
 4 files changed, 45 insertions(+), 9 deletions(-)
 create mode 100644 .github/workflows/templates.yml

diff --git a/.github/workflows/templates.yml b/.github/workflows/templates.yml
new file mode 100644
index 00000000..54d284fb
--- /dev/null
+++ b/.github/workflows/templates.yml
@@ -0,0 +1,19 @@
+---
+name: Check Templates
+
+on:
+  workflow_dispatch:
+  push:
+    branches:
+      - main
+      - devel
+      - 618_templates_action
+
+jobs:
+  templates:
+    name: Check Templates
+    uses: pharmaverse/admiralci/.github/workflows/check-templates.yml@618_templates_action
+    secrets: inherit
+    #if: github.event_name == 'pull_request' 
+    with:
+      r-version: "4.1"
diff --git a/inst/templates/ad_adbcva.R b/inst/templates/ad_adbcva.R
index 641253cc..1dfafcee 100644
--- a/inst/templates/ad_adbcva.R
+++ b/inst/templates/ad_adbcva.R
@@ -300,7 +300,12 @@ adbcva_crtflag <- adbcva_adsl %>%
 
 admiralophtha_adbcva <- adbcva_crtflag
 
-# ---- Save output ----
+# Save output ----
 
-dir <- tempdir() # Change to whichever directory you want to save the dataset in
-save(admiralophtha_adbcva, file = file.path(dir, "admiralophtha_adbcva.rda"), compress = "bzip2")
+dir <- file.path(getwd(), "tmp")
+print(dir)
+if (!file.exists(dir)) {
+  # Create the folder
+  dir.create(dir)
+}
+save(admiralophtha_adbcva, file = file.path(dir, "adbcva.rda"), compress = "bzip2")
diff --git a/inst/templates/ad_adoe.R b/inst/templates/ad_adoe.R
index 416f3332..e0aa22ad 100644
--- a/inst/templates/ad_adoe.R
+++ b/inst/templates/ad_adoe.R
@@ -196,7 +196,12 @@ adoe_adsl <- adoe_aseq %>%
 
 admiralophtha_adoe <- adoe_adsl
 
-# ---- Save output ----
-
-dir <- tempdir() # Change to whichever directory you want to save the dataset in
-save(admiralophtha_adoe, file = file.path(dir, "admiralophtha_adoe.rda"), compress = "bzip2")
+# Save output ----
+
+dir <- file.path(getwd(), "tmp")
+print(dir)
+if (!file.exists(dir)) {
+  # Create the folder
+  dir.create(dir)
+}
+save(admiralophtha_adoe, file = file.path(dir, "adoe.rda"), compress = "bzip2")
diff --git a/inst/templates/ad_advfq.R b/inst/templates/ad_advfq.R
index b0b4d1e0..3cc0d6a2 100644
--- a/inst/templates/ad_advfq.R
+++ b/inst/templates/ad_advfq.R
@@ -306,5 +306,12 @@ admiralophtha_advfq <- advfq_adsl
 
 # ---- Save output ----
 
-dir <- tempdir() # Change to whichever directory you want to save the dataset in
-save(admiralophtha_advfq, file = file.path(dir, "admiralophtha_advfq.rda"), compress = "bzip2")
+# Save output ----
+
+dir <- file.path(getwd(), "tmp")
+print(dir)
+if (!file.exists(dir)) {
+  # Create the folder
+  dir.create(dir)
+}
+save(admiralophtha_advfq, file = file.path(dir, "advfq.rda"), compress = "bzip2")