Merge pull request #2 from patcdaniel/master

Updated readme and some of the filenames for sanity

Author: patcdaniel

README.md

@@ -1,4 +1,30 @@
-# IFCB Scripts
+# IFCB MBARI Scripts
+
 Collections of loose scripts and notebooks for IFCB debugging and processing.
 
+| Notebook                       | Description |
+|--------------------------------|-------------|
+| SCW-1-auto_class_display.ipynb |Access auto_classifier data from the SC Wharf IFCB|
+| SCW-2-recent-plot.ipynb        |Access the most recent data from the SC wharf IFCB using the API |
+| SCW-3-generate-TS.ipynb        |Generate a time series from the past 30 days of data from the SC wharf|
+| ifcb-raw-peakROI-plots.ipynb   |Generate peak-roi-y plots from raw IFCB data |
+| ifcb-raw-view-images.ipynb     |View raw images from the raw IFCB data |
+| ifcb-raw-plot-max-image-size.ipynb   |Plot maximum image size from raw IFCB data |
+
+## Jupyter Notebooks
+
+Jupyter notebooks are stored under the `/notebooks` directory. They can be run directly on the remote machines with a portforwarding to interact in browser.
+
+To run on particle (this requires installing a local version of anaconda):
+
+```
+jupyter notebook --ip=0.0.0.0 --port=8080 --no-browser
+```
+
+Then on your machine, you can run:
+
+```
+ssh -L 8080:localhost:8080 [email protected]
+```
 
+Finally open a browser and enter the url `localhost:8080/`.