From 6767954bfa387b6e733ffbf9ac071453c481cee4 Mon Sep 17 00:00:00 2001
From: Kayla Jackson <kaylajac@caltech.edu>
Date: Sun, 8 Sep 2024 16:02:31 -0700
Subject: [PATCH] Coerce `x` to matrix for `BiocNeighbors::findKNN()` to
 address issue #4

---
 R/concordex.R | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/R/concordex.R b/R/concordex.R
index 089fbd3..61544c2 100644
--- a/R/concordex.R
+++ b/R/concordex.R
@@ -101,7 +101,7 @@ setMethod("calculateConcordex", "ANY",
               labels <- labels_make_friendly(labels, nm=dimnames(x)[[1]])
 
               req_args <- list(
-                  x=x,
+                  x=as.matrix(x),
                   labels=labels,
                   n_neighbors=n_neighbors,
                   compute_similarity=compute_similarity,