Read this blog post for context: Build Reproducible and Scalable Computational Biology Systems
You can either deploy Metaflow following the documentation, or use Outerbounds for a manged version with a 30-day free trial.
You can find detailed instructions for setting up dependencies for each task in the links in the following section.
Cell classification: Fine-tune the pretrained Geneformer on a custom dataset (or the example, as demonstrated in this repository).