Repositories list

• mammalian-phenotype-ontology

  Public
  Standard terms for annotating mammalian phenotypic data

  jsonowlontology+ 5obophenotypingphenotypemammalsobofoundry

  Makefile

  •

  Creative Commons Attribution 4.0 International

  •6•19•264•1•Updated Jan 30, 2025Jan 30, 2025

• pgsnpdbschema

  Public
  MGI database : SNP

  Shell

  •0•0•0•0•Updated Jan 30, 2025Jan 30, 2025

• snpcacheload

  Public
  MGI cache load: SNP

  Python

  •0•0•0•0•Updated Jan 30, 2025Jan 30, 2025

• mgidbmigration

  Public
  Shell

  •0•0•0•0•Updated Jan 30, 2025Jan 30, 2025

• mousemine

  Public
  Java

  •1•3•1•2•Updated Jan 28, 2025Jan 28, 2025

• mgigff3

  Public
  Pipeline for generating the MGI.gff3 file.

  Python

  •0•0•0•0•Updated Jan 28, 2025Jan 28, 2025

• littriageload

  Public
  MGI load : Literature Triage load

  Python

  •0•0•0•0•Updated Jan 28, 2025Jan 28, 2025

• vlad

  Public
  Web based enrichment tool.

  Python

  •0•0•0•0•Updated Jan 27, 2025Jan 27, 2025

• mgihome

  Public
  Python

  •0•0•0•0•Updated Jan 27, 2025Jan 27, 2025

• pdfviewer

  Public
  web-based access to PDF files stored locally at MGI

  Python

  •0•0•0•0•Updated Jan 27, 2025Jan 27, 2025

• gxdhtload

  Public
  GXD High Throughput Raw Data Load

  Python

  •0•0•0•0•Updated Jan 27, 2025Jan 27, 2025

• autolittriage

  Public
  Using machine learning to automate literature triage tasks

  Python

  •0•0•0•0•Updated Jan 27, 2025Jan 27, 2025

• lib_py_littriage

  Public
  Contains libraries necessary for literature triage, supporting relevant data loads and curatorial interfaces.

  Python

  •0•0•0•0•Updated Jan 27, 2025Jan 27, 2025

• mousemine_etl

  Public
  Python

  •0•2•0•0•Updated Jan 22, 2025Jan 22, 2025

• AGRdatafeed

  Public
  Feed MGI data to AGR

  Python

  •0•0•0•0•Updated Jan 21, 2025Jan 21, 2025

• AGRdatafeedPS

  Public
  Datafeed for the Alliance persistent store.

  Python

  •0•0•0•0•Updated Jan 21, 2025Jan 21, 2025

• reports_db

  Public
  MGI reports : public

  Python

  •0•0•0•0•Updated Jan 16, 2025Jan 16, 2025

• qcreports_db

  Public
  MGI reports : qc/curators

  Python

  •0•0•0•0•Updated Jan 16, 2025Jan 16, 2025

• loadadmin

  Public
  Shell

  •0•0•0•0•Updated Jan 15, 2025Jan 15, 2025

• slimtermload

  Public
  Loads slim terms for vocabularies as MGI_Sets

  Shell

  •0•0•0•0•Updated Jan 15, 2025Jan 15, 2025

• assemblyseqload

  Public
  MGI load: Assembly Sequence

  Shell

  •0•0•0•0•Updated Jan 8, 2025Jan 8, 2025

• ensemblseqload

  Public
  MGI load: Ensembl Sequences

  Java

  •0•0•0•0•Updated Jan 8, 2025Jan 8, 2025

• genemodelload

  Public
  MGI load: Gene Model

  Python

  •0•0•0•0•Updated Jan 8, 2025Jan 8, 2025

• nomenload

  Public
  MGI load: Nomenclature

  Python

  •0•0•0•0•Updated Jan 7, 2025Jan 7, 2025

• femover

  Public
  Move Data from MGD into FE

  Python

  •0•0•0•0•Updated Dec 30, 2024Dec 30, 2024

• pdfdownload

  Public
  Automates downloading of desired PDF files for articles from selected journals.

  Python

  •0•0•0•0•Updated Dec 24, 2024Dec 24, 2024

• faq

  Public
  Shell

  •0•0•0•0•Updated Dec 20, 2024Dec 20, 2024

• fewi

  Public
  Front End Web Interface

  Java

  •1•2•0•8•Updated Dec 17, 2024Dec 17, 2024

• userhelp

  Public
  Shell

  •0•0•0•0•Updated Dec 17, 2024Dec 17, 2024

• wksilvers

  Public
  Python

  •0•0•0•0•Updated Dec 17, 2024Dec 17, 2024