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    49 repositories

    • workbench-template-md

      Public template
      TEMPLATE for markdown lessons
      Other
      •22•0•0•0•Updated Jan 14, 2025Jan 14, 2025

    • workbench-template-rmd

      Public template
      MB/UoM TEMPLATE for R Markdown lessons
      R
      •
      Other
      •12•0•0•0•Updated Jan 7, 2025Jan 7, 2025

    • seurat-de

      Public
      Gene ontology analysis and integration for single-cell RNA-seq data
      R
      •
      Other
      •0•0•0•0•Updated Dec 9, 2024Dec 9, 2024

    • R_gc_content

      Public
      Example Git repository with R code to calculate GC content of a FASTA file.
      R
      •
      MIT License
      •11•1•0•0•Updated Dec 3, 2024Dec 3, 2024

    • MelBioInf_docs

      Public
      Melbourne Bioinformatics documentation in markdown format
      HTML
      •80•107•0•0•Updated Dec 2, 2024Dec 2, 2024

    • mb-varnish

      Public
      Template for pkgdown site
      SCSS
      •
      Other
      •33•0•0•0•Updated Nov 19, 2024Nov 19, 2024

    • mb-workbench-template-md

      Public template
      TEMPLATE for markdown lessons
      Other
      •22•0•0•0•Updated Nov 19, 2024Nov 19, 2024

    • mb-workbench-template-rmd

      Public template
      TEMPLATE for R Markdown lessons
      R
      •
      Other
      •12•0•0•0•Updated Nov 19, 2024Nov 19, 2024

    • COMP90014_2024

      Public
      Jupyter Notebook
      •2•3•0•0•Updated Oct 15, 2024Oct 15, 2024

    • python_gc_content

      Public
      Example Git repository with Python code to calculate GC content of a FASTA file.
      Python
      •
      MIT License
      •20•0•1•0•Updated Oct 14, 2024Oct 14, 2024

    • Seurat_DE_Workshop

      Public
      1•0•0•0•Updated Oct 11, 2024Oct 11, 2024

    • gitgood

      Public
      0•0•0•0•Updated Oct 10, 2024Oct 10, 2024

    • training-infrastructure

      Public
      HCL
      •
      MIT License
      •4•1•0•2•Updated Jul 11, 2024Jul 11, 2024

    • COMP90016

      Public
      Material assoicated with teaching the subject COMP90016
      CSS
      •
      MIT License
      •1•2•0•0•Updated Jun 13, 2024Jun 13, 2024

    • COMP90016-envs

      Public
      Environment config settings for COMP90016 workshops and assignments.
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 10, 2024Mar 10, 2024

    • COMP90014

      Public
      Python
      •
      MIT License
      •0•1•0•0•Updated Nov 3, 2023Nov 3, 2023

    • COMP90014-conda

      Public
      Environment settings for workshops in Algorithms in Bioinformatics
      GNU General Public License v3.0
      •0•1•0•0•Updated Oct 2, 2023Oct 2, 2023

    • r-intro-biologists

      Public
      HTML
      •
      Other
      •4•8•0•0•Updated Jul 14, 2023Jul 14, 2023

    • data_tidying_and_visualisation

      Public
      Workshops on Pandas, data tidying, and visualisation
      Jupyter Notebook
      •10•6•0•0•Updated Nov 24, 2020Nov 24, 2020

    • MelBioInf_docs_test

      Public
      Test github.io changes to MelBioInf_docs
      HTML
      •1•1•0•0•Updated Jun 14, 2019Jun 14, 2019

    • Karaage3-plugins-project-application

      Public
      A Project Application plugin for Karaage3. Captures some basic extra information not in the current application process.
      JavaScript
      •1•0•1•1•Updated Mar 16, 2018Mar 16, 2018

    • Analytics

      Public
      Usage data analytics
      Python
      •0•0•8•0•Updated May 6, 2017May 6, 2017

    • ggplotheatmap

      Public
      An R package for making heatmaps with ggplot
      R
      •2•4•1•0•Updated Sep 19, 2016Sep 19, 2016

    • learnggplot

      Public
      Learning materials for ggplot
      R
      •
      MIT License
      •1•2•0•0•Updated Jun 27, 2016Jun 27, 2016

    • spank-private-tmp

      Public
      Slurm spank plugin to give each job private /tmp (and/or other dirs)
      C
      •
      Other
      •17•4•0•0•Updated Feb 29, 2016Feb 29, 2016

    • datacarpentry_2015-11-23_VLSCI

      Public
      Python
      •
      Other
      •0•0•0•0•Updated Jan 15, 2016Jan 15, 2016

    • R-genomics

      Public
      Lesson on data analysis and visualization in R for genomics
      HTML
      •
      Other
      •76•6•0•0•Updated Nov 24, 2015Nov 24, 2015

    • shell-genomics

      Public
      Lesson for the shell for genomics
      CSS
      •
      Other
      •189•4•0•0•Updated Nov 23, 2015Nov 23, 2015

    • OpenRefine-ecology

      Public
      Lesson on OpenRefine for ecology
      CSS
      •
      Other
      •112•0•0•0•Updated Nov 22, 2015Nov 22, 2015

    • spreadsheet-ecology-lesson

      Public
      This repository contains Data Carpentry lessons on using spreadsheets for data wrangling.
      HTML
      •
      Other
      •140•0•0•0•Updated Nov 22, 2015Nov 22, 2015