Repositories list

• Operant-Cage

  Public
  C++

  •1•1•0•0•Updated Dec 18, 2024Dec 18, 2024

• snRNAseq_voles

  Public
  snRNA-seq analysis of nucleus accumbens tissue from prairie voles

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Nov 12, 2024Nov 12, 2024

• PPT-Chamber

  Public
  Files to fabricate Partner Preference Test chambers

  0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

• pi_IP_screen

  Public
  GNU General Public License v3.0

  •0•0•0•0•Updated Oct 22, 2024Oct 22, 2024

• makenzie_operant

  Public
  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jul 2, 2024Jul 2, 2024

• PhAT

  Public
  A flexible open-source GUI-driven toolkit for photometry analysis

  guiplotlyvisualization-tools+ 2fiber-photometrypython

  Python

  •

  MIT License

  •2•6•2•0•Updated Jan 23, 2024Jan 23, 2024

• Pierce2023_Currentbiology

  Public
  0•0•0•0•Updated Nov 28, 2023Nov 28, 2023

• Home_Cage

  Public
  Project Development for the Home Cage Experiment and Environment

  Python

  •0•0•0•0•Updated Jul 24, 2023Jul 24, 2023

• separationRNAseq

  Public
  HTML

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Apr 13, 2023Apr 13, 2023

• CleversysSummaryRearranger

  Public
  To rearrange the summary file from Cleversys and put it in a usable format

  Jupyter Notebook

  •0•0•0•0•Updated Feb 7, 2023Feb 7, 2023

• Lickometer

  Public
  Initial Lickometer Upload

  C++

  •1•1•0•0•Updated Jul 1, 2022Jul 1, 2022

• Npm-Analysis-inprogress

  Public
  Where we will publish the fiber pho analysis

  0•0•0•0•Updated May 23, 2022May 23, 2022

• Cleversys_scripts

  Public
  python scripts for parsing cleversys output

  Jupyter Notebook

  •1•0•0•0•Updated Mar 22, 2022Mar 22, 2022

• BlackWhiteCage

  Public
  This chamber has an open-topped half painted white and an enclosed half painted black

  0•0•0•0•Updated Feb 23, 2022Feb 23, 2022

• fiberphotometry

  Public
  Python

  •0•0•0•0•Updated Aug 30, 2021Aug 30, 2021

• RampCage

  Public
  Development for the Ramp Cage with a wheel, IR beam break, and servo brake

  C++

  •0•0•0•0•Updated Jul 20, 2021Jul 20, 2021

• UI-lab-capture

  Public
  An interface designed to make the scientists job easier by providing a simple, yet effective way of setting up their cameras and starting their data collection.

  labjacku3-lvflirblackflysvoles+ 5volepythonguianacondaspinnaker

  Python

  •1•0•0•0•Updated Apr 7, 2020Apr 7, 2020

• monogamousreunion

  Public
  This repository houses the analytical code for the paper, "A neuronal signature for monogamous reunion".

  MATLAB

  •0•0•0•0•Updated Mar 10, 2020Mar 10, 2020

• Imaging-Paper

  Public
  Code and data related the imaging paper, "A Neuronal Signature for Monogamous Reunion".

  MATLAB

  •0•0•0•0•Updated Mar 10, 2020Mar 10, 2020

• DonaldsonDLC

  Public
  Using markerless pose estimation to quantify mating bouts.

  Python

  •0•1•0•0•Updated Feb 21, 2020Feb 21, 2020

• Documents

  Public
  A repo to house various documents used by the lab.

  labscience-researchvole+ 1donaldson

  Python

  •0•0•0•0•Updated Feb 21, 2020Feb 21, 2020

• Tilt_Cage

  Public
  Development for the tilting choice chamber

  C++

  •0•0•0•0•Updated Jan 28, 2020Jan 28, 2020

• vole_surgery_registry

  Public
  Ruby

  •1•0•0•0•Updated Dec 11, 2019Dec 11, 2019

• DLC_Helper

  Public
  Designed to making setting up a markerless pose estimation of user-defined features with deep learning for all animals, including humans

  pythondeep-learninganaconda+ 1deeplabcut

  Python

  •

  MIT License

  •0•0•0•0•Updated Jul 19, 2019Jul 19, 2019