{"payload":{"pageCount":4,"repositories":[{"type":"Public","name":"obolite","owner":"YuLab-SMU","isFork":false,"description":"Create sqlite from an obo file","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,2],"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-09-28T13:27:47.836Z"}},{"type":"Public","name":"yulab-smu.github.io","owner":"YuLab-SMU","isFork":false,"description":"🏠 Homepage for YuLab-SMU","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":12,"forksCount":4,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-09-28T05:29:19.449Z"}},{"type":"Public","name":"ChIPseeker","owner":"YuLab-SMU","isFork":false,"description":"🎯 ChIP peak Annotation, Comparison and Visualization","allTopics":["annotation","comparison","epigenetics","chip-seq","atac-seq","epigenomics","visualization"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":1,"issueCount":102,"starsCount":220,"forksCount":75,"license":null,"participation":[0,0,0,4,0,0,0,0,0,0,0,0,0,0,4,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,2,0,2,0,0,0,0,0,0,0,0,0,2,0,0,0,2,0,0,0,0,14],"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-09-26T10:00:11.994Z"}},{"type":"Public","name":"ggsc","owner":"YuLab-SMU","isFork":false,"description":"🧠 Visualizing Single Cell and Spatial Transcriptomics","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":40,"forksCount":11,"license":null,"participation":[1,5,6,13,17,1,0,10,8,0,11,0,0,0,2,0,0,0,0,1,0,0,0,0,0,8,1,8,0,0,2,0,0,6,3,1,0,8,6,0,2,4,0,1,0,6,0,2,7,0,0,0],"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-09-24T13:20:04.283Z"}},{"type":"Public","name":"wget","owner":"YuLab-SMU","isFork":false,"description":"download files in R using wget -c","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":17,"forksCount":3,"license":null,"participation":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7,2,4,0,0,0,2],"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-09-24T12:39:29.345Z"}},{"type":"Public","name":"SVP","owner":"YuLab-SMU","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":5,"forksCount":0,"license":"GNU General Public License v3.0","participation":[0,5,4,7,1,15,8,1,1,0,4,2,0,0,13,3,0,3,0,0,2,0,1,3,2,0,2,4,14,3,0,14,12,6,13,1,8,1,3,1,4,1,0,0,6,5,0,1,1,0,1,0],"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-09-24T08:57:54.855Z"}},{"type":"Public","name":"sclet","owner":"YuLab-SMU","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":1,"starsCount":2,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-09-21T15:25:52.604Z"}},{"type":"Public","name":"ggtangle","owner":"YuLab-SMU","isFork":false,"description":"Draw Network with Data","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":6,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-09-18T14:14:39.697Z"}},{"type":"Public","name":"ggflow","owner":"YuLab-SMU","isFork":false,"description":"Draw flow chart based on ggtree","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":8,"forksCount":0,"license":null,"participation":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8,0,0,1,0],"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-09-18T09:54:50.640Z"}},{"type":"Public","name":"ggtreeDendro","owner":"YuLab-SMU","isFork":false,"description":"Drawing 'dendrogram' using 'ggtree'","allTopics":["clustering","dendrogram"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":12,"forksCount":3,"license":null,"participation":[0,0,0,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,2,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0],"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-09-14T07:44:36.279Z"}},{"type":"Public","name":"aplot","owner":"YuLab-SMU","isFork":false,"description":"Decorate a plot with associated information","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":9,"starsCount":97,"forksCount":14,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-09-08T02:46:50.794Z"}},{"type":"Public","name":"ggtreeSpace","owner":"YuLab-SMU","isFork":false,"description":"🕸️Exploring phylomorphospace using 'ggtree'","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":5,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-09-07T10:31:02.012Z"}},{"type":"Public","name":"enrichplot","owner":"YuLab-SMU","isFork":false,"description":"Visualization of Functional Enrichment Result","allTopics":["pathway-analysis","enrichment-analysis","visualization"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":125,"starsCount":226,"forksCount":65,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-09-04T02:42:32.619Z"}},{"type":"Public","name":"scatterpie","owner":"YuLab-SMU","isFork":false,"description":"🎨 scatter pie plot","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":21,"starsCount":60,"forksCount":16,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-28T13:55:43.016Z"}},{"type":"Public","name":"ggfun","owner":"YuLab-SMU","isFork":false,"description":"useful functions for ggplot","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":18,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-28T13:55:06.351Z"}},{"type":"Public","name":"mirrorselect","owner":"YuLab-SMU","isFork":false,"description":"To help select CRAN and Bioconductor mirrors.","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":8,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-26T13:58:13.236Z"}},{"type":"Public","name":"DOSE","owner":"YuLab-SMU","isFork":false,"description":"😷 Disease Ontology Semantic and Enrichment analysis","allTopics":["semantic-similarity","disease-ontology","enrichment-analysis"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":2,"issueCount":23,"starsCount":115,"forksCount":35,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-26T10:24:35.861Z"}},{"type":"Public","name":"ReactomePA","owner":"YuLab-SMU","isFork":false,"description":"Reactome Pathway Analysis","allTopics":["enrichment-analysis","reactome-pathway-analysis","reactomepa"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":15,"starsCount":37,"forksCount":10,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-26T10:12:28.851Z"}},{"type":"Public","name":"yulab.utils","owner":"YuLab-SMU","isFork":false,"description":"Miscellaneous functions commonly used by 'YuLab-SMU'.","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":1,"starsCount":31,"forksCount":10,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-26T07:50:29.807Z"}},{"type":"Public","name":"wikiprofiler","owner":"YuLab-SMU","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":1,"issueCount":0,"starsCount":5,"forksCount":4,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-26T04:50:20.115Z"}},{"type":"Public","name":"clusterProfiler","owner":"YuLab-SMU","isFork":false,"description":"📊 A universal enrichment tool for interpreting omics data","allTopics":["visualization","go","rstats","kegg","enrichment-analysis","gsea"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":1,"issueCount":321,"starsCount":1006,"forksCount":253,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-26T01:16:40.220Z"}},{"type":"Public","name":"fanyi","owner":"YuLab-SMU","isFork":false,"description":"Translate Words or Sentences via Online Translators","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":4,"starsCount":45,"forksCount":6,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-21T08:28:28.181Z"}},{"type":"Public","name":"meshes","owner":"YuLab-SMU","isFork":false,"description":"🩺 MeSH Enrichment and Semantic analyses","allTopics":["semantic-similarity","medical-subject-headings","enrichment-analysis"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":1,"issueCount":2,"starsCount":11,"forksCount":4,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-21T04:23:54.736Z"}},{"type":"Public","name":"GOSemSim","owner":"YuLab-SMU","isFork":false,"description":"⛳ GO-terms Semantic Similarity Measures","allTopics":["bioinformatics","gene-ontology","semantic-similarity"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":15,"starsCount":58,"forksCount":26,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-21T04:17:05.225Z"}},{"type":"Public","name":"ggtree","owner":"YuLab-SMU","isFork":false,"description":"🎄Visualization and annotation of phylogenetic trees","allTopics":["visualization","ggplot2","r","annotations","phylogenetic-trees"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":1,"issueCount":160,"starsCount":838,"forksCount":173,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-20T09:23:55.085Z"}},{"type":"Public","name":"treeio","owner":"YuLab-SMU","isFork":false,"description":"🌱 Base Classes and Functions for Phylogenetic Tree Input and Output","allTopics":["parser","exporter","phylogenetic-trees"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":1,"issueCount":25,"starsCount":95,"forksCount":25,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-20T09:23:15.132Z"}},{"type":"Public","name":"gson","owner":"YuLab-SMU","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-19T12:17:19.847Z"}},{"type":"Public","name":"yulabcheck","owner":"YuLab-SMU","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-17T09:12:52.365Z"}},{"type":"Public","name":"MicrobiomeProfiler","owner":"YuLab-SMU","isFork":false,"description":"🦠 A shiny package for microbiome functional enrichment analysis","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":1,"issueCount":0,"starsCount":36,"forksCount":7,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-15T16:25:36.046Z"}},{"type":"Public","name":"sc2p","owner":"YuLab-SMU","isFork":false,"description":"single cell to pathway","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":6,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-10T04:32:09.255Z"}}],"repositoryCount":94,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"YuLab-SMU repositories"}