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    47 repositories

    • obook

      Public
      OBO Organized Knowledge: Training materials for becoming an OBO engineer
      Makefile
      •
      Creative Commons Zero v1.0 Universal
      •38•0•0•0•Updated Nov 15, 2024Nov 15, 2024

    • rsc-cmo

      Public
      Chemical Methods Ontology
      Creative Commons Attribution 4.0 International
      •7•0•0•0•Updated Nov 13, 2024Nov 13, 2024

    • knowledge_base

      Public
      A place for all knowledge regarding Research Data Management (RDM) in Chemistry
      knowledge-baserdmnfdinfdi4chem
      JavaScript
      •27•11•9•0•Updated Nov 12, 2024Nov 12, 2024

    • VibrationalSpectroscopyOntology

      Public
      WORK IN PROGRESS - The Vibration Spectroscopy Ontology defines technical terms with which research data produced in vibrational spectroscopy experiments can be semantically enriched, made machine readable and FAIR.
      raman-spectroscopyontology-development-kitnfdi4chemowlontology
      Makefile
      •
      Creative Commons Attribution 4.0 International
      •7•7•17•4•Updated Nov 11, 2024Nov 11, 2024

    • nmrxiv

      Public
      nmrXiv is currently developed as the FAIR, consensus-driven NMR data repository and computational platform. The ultimate goal is to accelerate broader coordination and data sharing among researchers by enabling storage, management, sharing and analysis of NMR data.
      nmrnmr-datanfdi4chem
      JavaScript
      •
      MIT License
      •5•14•86•4•Updated Nov 8, 2024Nov 8, 2024

    • workshops

      Public
      NFDI4Chem is dedicated to the development of MIChI standards across various disciplines within the field of Chemistry. This website serves as a documentation hub for the proposed MIChIs and provides insights into the workshops conducted to refine and advance these standards.
      workshopsstandardsmichi
      JavaScript
      •
      MIT License
      •0•0•8•0•Updated Oct 21, 2024Oct 21, 2024

    • cs-ms-converter

      Public
      The NFDI4Chem converter service is a REST API and Python server implementation to convert mass spectrometry data from various instrument vendors and converts into the open mzML format using proteowizard-msconvert . It also allows validation of the converted mzML file using the OpenMS FileInfo tool.
      mass-spectrometrymzml
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 14, 2024Oct 14, 2024

    • cs-documentation

      Public
      The NFDI4Chem converter service is a REST API and Python server implementation to convert mass spectrometry data from various instrument vendors and converts into the open mzML format using proteowizard-msconvert . It also allows validation of the converted mzML file using the OpenMS FileInfo tool.
      mass-spectrometrymzml
      HTML
      •
      MIT License
      •0•0•0•0•Updated Oct 4, 2024Oct 4, 2024

    • nmrium-react-wrapper

      Public
      A wrapper around NMRium react component to enable seamless integration into third-party applications built on any modern framework.
      nmr-spectroscopynmr-tools
      TypeScript
      •
      MIT License
      •3•10•21•1•Updated Sep 25, 2024Sep 25, 2024

    • MIChI

      Public
      Prototype for NFDI4Chem MIChI
      Python
      •
      GNU General Public License v3.0
      •1•2•0•1•Updated Sep 25, 2024Sep 25, 2024

    • ConsortiumMeeting-5_0-abstracts

      Public
      Abstracts submitted for the NFDI4Chem Consortium Meeting 5.0 September 2024 in Halle
      JavaScript
      •2•0•0•0•Updated Sep 10, 2024Sep 10, 2024

    • repo-helm-charts

      Public
      Packaging of nmrxiv and vibspecdb repository application for Kubernetes as Helm Charts.
      kuberneteschartshelmhelm-charts
      Smarty
      •1•2•5•1•Updated Sep 1, 2024Sep 1, 2024

    • workshop_maps

      Public
      Python
      •0•0•0•0•Updated Aug 26, 2024Aug 26, 2024

    • nmr-platform

      Public
      PHP
      •0•2•1•0•Updated Jul 30, 2024Jul 30, 2024

    • nmrkit

      Public
      A collection of powerful micro services designed to simplify your NMR data processing and analysis
      Python
      •
      MIT License
      •2•3•22•2•Updated Jun 7, 2024Jun 7, 2024

    • nmrxiv-nodejs-microservice

      Public
      API Service To Process Spectra from various data formats to NMRium format.
      TypeScript
      •0•0•1•0•Updated Mar 21, 2024Mar 21, 2024

    • oai4schemas

      Public
      This repo contains a XML schema that can embed JSON+LD (bio)schema metadata, crosswalks and examples. They are designed to work with https://radar.products.fiz-karlsruhe.de/en/radarfeatures/radar-oai-provider.
      Shell
      •
      Apache License 2.0
      •0•2•1•0•Updated Feb 13, 2024Feb 13, 2024

    • rxno

      Public
      Name Reaction Ontology
      Creative Commons Attribution 4.0 International
      •12•0•7•0•Updated Nov 28, 2023Nov 28, 2023

    • unit-ontology

      Public
      An ontology of units of measurements
      Makefile
      •
      Creative Commons Attribution 4.0 International
      •12•0•0•0•Updated Nov 28, 2023Nov 28, 2023

    • ontology-elements

      Public
      Ontology-Elements project aims at developing custom ontology rich html elements (web components). The primary benefit of custom html elements is that they can be used with any framework, or even without a framework. This makes them ideal for distributing components where the end consumer may not be using the same frontend stack
      webcomponentsontologiesfair-data
      Vue
      •
      MIT License
      •1•2•27•1•Updated Oct 12, 2023Oct 12, 2023

    • nmrxiv-docs

      Public archive
      This documentation site is composed of detailed walk-through explanations for basic and more complex functionalities for both nmrXiv developers (Developer Guides) and users (Submission Guides). With our documentation-first approach we would like to allow nmrXiv developers and users to discuss proposed features and ensure that the implementations…
      nmrnmr-spectroscopynmr-spectra
      JavaScript
      •
      MIT License
      •0•1•25•1•Updated Aug 9, 2023Aug 9, 2023

    • vibspecdb

      Public
      Vibspecdb
      Vue
      •
      MIT License
      •0•0•0•0•Updated Jun 2, 2023Jun 2, 2023

    • obi

      Public
      The Ontology for Biomedical Investigations
      Python
      •
      Creative Commons Attribution 4.0 International
      •26•0•0•0•Updated May 8, 2023May 8, 2023

    • nmrxiv-python-microservice

      Public archive
      Python
      •1•1•2•1•Updated Mar 12, 2023Mar 12, 2023

    • ontotools-cheatsheets

      Public
      ontology tools cheatsheets
      0•2•0•0•Updated Jan 25, 2023Jan 25, 2023

    • Fuseki-Box

      Public
      Apache Jena Fuseki in a Vagrant Box
      Jinja
      •0•1•1•0•Updated Jan 3, 2023Jan 3, 2023

    • semanticchemistry

      Public
      Chemical Information Ontology
      Java
      •
      Creative Commons Zero v1.0 Universal
      •9•0•0•0•Updated Dec 7, 2022Dec 7, 2022

    • nmrxiv-cli

      Public
      MIT License
      •0•0•0•0•Updated Jul 22, 2022Jul 22, 2022

    • NMR-Assay-Ontology

      Public archive
      NMR Assay Ontology - This repository is marked as archived, as the work for it has been put on hold for now.
      Shell
      •0•2•2•0•Updated Jun 9, 2022Jun 9, 2022

    • helm-charts

      Public
      Helm charts to deploy applications to Kubernetes clusters
      Smarty
      •
      Apache License 2.0
      •2•4•0•0•Updated May 28, 2022May 28, 2022