feat: manage project dependencies with uv and update python (#223)

Co-authored-by: Daniel Suveges <[email protected]>

Author: ireneisdoomed

README.md

@@ -18,16 +18,16 @@ This repository contains schema definitions of some of the data models the Open
 - `molecular_interactions.json`: definition of the [molecular interactions](https://platform-docs.opentargets.org/target/molecular-interactions) input.
 - `molecular_interactions-output.json`: Definition for the molecular interactions dataset generated by the Platform ETL.
 - `gene-essentiality.json`: definition of gene essentiality target annotation. Developed based on [DepMap](https://depmap.org/) CRISPR/CAS9 screens.
+- `pharmacogenomics.json`: definition of pharmacogenomics data model that hosts data from the [PharmGKB](https://www.pharmgkb.org/) dataset.
 
 ## Dev environment set up
 ```bash
 # Clone the project
 git clone https://github.com/opentargets/json_schema
 cd json_schema
 
-# Install Poetry
-curl -sSL https://install.python-poetry.org | python -
+# Install UV
+curl -LsSf https://astral.sh/uv/install.sh | sh
 
 # Install the project dependencies
-poetry install
-poetry shell
+uv pip install .

poetry.lock

@@ -1,20 +1,18 @@
-[tool.poetry]
+[project]
 name = "json-schema"
 version = "23.06.1"
 description = "Schemas describing Open Targets data models"
-authors = ["Open Targets Data Team <[email protected]>"]
+authors = [{name = "Open Targets Data Team", email = "[email protected]"}]
 license = "Apache-2.0"
 readme = "README.md"
-packages = [{include = "json_schema"}]
-
-[tool.poetry.dependencies]
-python = "3.8.15"
-pydantic = "^1.10.7"
-
-[tool.poetry.group.dev.dependencies]
-pytest = "^7.3.1"
-mypy = "^1.3.0"
+requires-python = ">=3.10.4"
+dependencies = [
+    "pydantic==1.10.7",
+]
 
 [build-system]
-requires = ["poetry-core"]
-build-backend = "poetry.core.masonry.api"
+requires = ["hatchling"]
+build-backend = "hatchling.build"
+
+[tool.hatch.build.targets.wheel]
+packages = ["json_schema"]