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"description": "Coastal Flood Projections" - } - ], - "roles": [ - "data" - ] - } - }, - "bbox": [ - 31.790465874113842, - 28.575829866514702, - 33.34157966929302, - 32.05539709905289 - ], - "stac_extensions": [ - "https://stac-extensions.github.io/projection/v1.1.0/schema.json", - "https://stac-extensions.github.io/file/v2.1.0/schema.json", - "https://stac-extensions.github.io/raster/v1.1.0/schema.json", - "https://stac-extensions.github.io/eo/v1.1.0/schema.json" - ], - "collection": "cfhp" -} \ No newline at end of file diff --git a/notebooks/25_cfhp.ipynb b/notebooks/25_cfhp.ipynb index e4baf979f9..7d97c0a1ae 100644 --- a/notebooks/25_cfhp.ipynb +++ b/notebooks/25_cfhp.ipynb @@ -49,18 +49,24 @@ }, { "cell_type": "code", - "execution_count": 51, + "execution_count": 1, "metadata": {}, "outputs": [ { - "data": { - "application/javascript": "\n setTimeout(function() {\n var nbb_cell_id = 51;\n var nbb_unformatted_code = \"# Import standard packages\\nimport os\\nimport pathlib\\nimport sys\\nimport json\\nimport numpy as np\\nimport geopandas as gpd\\nimport pandas as pd\\nimport matplotlib.pyplot as plt\\nimport xarray as xr\\nfrom dotenv import load_dotenv\\nimport math\\nfrom pathlib import Path\\nfrom typing import Any, Dict, List, Optional, Tuple, Union\\nimport rioxarray as rio\\n#load_dotenv()\\n\\n# Import custom functionality\\nfrom coclicodata.drive_config import p_drive\\nfrom coclicodata.etl.cf_compliancy_checker import check_compliancy, save_compliancy\\nfrom coastmonitor.io.utils import name_block\\n\\n# Define (local and) remote drives\\ncoclico_data_dir = p_drive.joinpath(\\\"11207608-coclico\\\", \\\"FULLTRACK_DATA\\\")\\n\\n# Workaround to the Windows OS (10) udunits error after installation of cfchecker: https://github.com/SciTools/iris/issues/404\\nos.environ[\\\"UDUNITS2_XML_PATH\\\"] = str(\\n pathlib.Path().home().joinpath( # change to the udunits2.xml file dir in your Python installation\\n r\\\"Anaconda3\\\\pkgs\\\\udunits2-2.2.28-h892ecd3_0\\\\Library\\\\share\\\\udunits\\\\udunits2.xml\\\"\\n )\\n)\\n\\n# use local or remote data dir\\nuse_local_data = False\\nds_dirname = \\\"WP4\\\"\\n\\nif use_local_data: \\n ds_dir = pathlib.Path().home().joinpath(\\\"data\\\", \\\"tmp\\\", ds_dirname)\\nelse: \\n ds_dir = coclico_data_dir.joinpath(ds_dirname)\\n\\nif not ds_dir.exists():\\n raise FileNotFoundError(\\\"Directory with data does not exist.\\\")\\n\\n# directory to export result (make if not exists)\\ncog_dir = ds_dir.joinpath(\\\"cog\\\") # for checking CF compliancy\\ncog_dirs = ds_dir.joinpath(\\\"cogs_final\\\") # for making all files CF compliant\\ncog_dir.mkdir(parents=True, exist_ok=True)\";\n var nbb_formatted_code = \"# Import standard packages\\nimport os\\nimport pathlib\\nimport sys\\nimport json\\nimport numpy as np\\nimport geopandas as gpd\\nimport pandas as pd\\nimport matplotlib.pyplot as plt\\nimport xarray as xr\\nfrom dotenv import load_dotenv\\nimport math\\nfrom pathlib import Path\\nfrom typing import Any, Dict, List, Optional, Tuple, Union\\nimport rioxarray as rio\\n\\n# load_dotenv()\\n\\n# Import custom functionality\\nfrom coclicodata.drive_config import p_drive\\nfrom coclicodata.etl.cf_compliancy_checker import check_compliancy, save_compliancy\\nfrom coastmonitor.io.utils import name_block\\n\\n# Define (local and) remote drives\\ncoclico_data_dir = p_drive.joinpath(\\\"11207608-coclico\\\", \\\"FULLTRACK_DATA\\\")\\n\\n# Workaround to the Windows OS (10) udunits error after installation of cfchecker: https://github.com/SciTools/iris/issues/404\\nos.environ[\\\"UDUNITS2_XML_PATH\\\"] = str(\\n pathlib.Path()\\n .home()\\n .joinpath( # change to the udunits2.xml file dir in your Python installation\\n r\\\"Anaconda3\\\\pkgs\\\\udunits2-2.2.28-h892ecd3_0\\\\Library\\\\share\\\\udunits\\\\udunits2.xml\\\"\\n )\\n)\\n\\n# use local or remote data dir\\nuse_local_data = False\\nds_dirname = \\\"WP4\\\"\\n\\nif use_local_data:\\n ds_dir = pathlib.Path().home().joinpath(\\\"data\\\", \\\"tmp\\\", ds_dirname)\\nelse:\\n ds_dir = coclico_data_dir.joinpath(ds_dirname)\\n\\nif not ds_dir.exists():\\n raise FileNotFoundError(\\\"Directory with data does not exist.\\\")\\n\\n# directory to export result (make if not exists)\\ncog_dir = ds_dir.joinpath(\\\"cog\\\") # for checking CF compliancy\\ncog_dirs = ds_dir.joinpath(\\\"cogs_final\\\") # for making all files CF compliant\\ncog_dir.mkdir(parents=True, exist_ok=True)\";\n var nbb_cells = Jupyter.notebook.get_cells();\n for (var i = 0; i < nbb_cells.length; ++i) {\n if (nbb_cells[i].input_prompt_number == nbb_cell_id) {\n if (nbb_cells[i].get_text() == nbb_unformatted_code) {\n nbb_cells[i].set_text(nbb_formatted_code);\n }\n break;\n }\n }\n }, 500);\n ", - "text/plain": [ - "" - ] - }, - "metadata": {}, - "output_type": "display_data" + "name": "stderr", + "output_type": "stream", + "text": [ + "C:\\Users\\soest\\AppData\\Local\\Temp\\ipykernel_15168\\783002922.py:7: DeprecationWarning: Shapely 2.0 is installed, but because PyGEOS is also installed, GeoPandas still uses PyGEOS by default. However, starting with version 0.14, the default will switch to Shapely. To force to use Shapely 2.0 now, you can either uninstall PyGEOS or set the environment variable USE_PYGEOS=0. You can do this before starting the Python process, or in your code before importing geopandas:\n", + "\n", + "import os\n", + "os.environ['USE_PYGEOS'] = '0'\n", + "import geopandas\n", + "\n", + "In the next release, GeoPandas will switch to using Shapely by default, even if PyGEOS is installed. If you only have PyGEOS installed to get speed-ups, this switch should be smooth. However, if you are using PyGEOS directly (calling PyGEOS functions on geometries from GeoPandas), this will then stop working and you are encouraged to migrate from PyGEOS to Shapely 2.0 (https://shapely.readthedocs.io/en/latest/migration_pygeos.html).\n", + " import geopandas as gpd\n", + "c:\\Users\\soest\\AppData\\Local\\mambaforge\\envs\\coclico\\Lib\\site-packages\\dask\\dataframe\\_pyarrow_compat.py:17: FutureWarning: Minimal version of pyarrow will soon be increased to 14.0.1. You are using 12.0.1. Please consider upgrading.\n", + " warnings.warn(\n" + ] } ], "source": [ @@ -116,7 +122,7 @@ }, { "cell_type": "code", - "execution_count": 56, + "execution_count": 2, "metadata": {}, "outputs": [ { @@ -125,16 +131,6 @@ "text": [ "Data is already CF_compliant\n" ] - }, - { - "data": { - "application/javascript": "\n setTimeout(function() {\n var nbb_cell_id = 56;\n var nbb_unformatted_code = \"print('Data is already CF_compliant')\";\n var nbb_formatted_code = \"print(\\\"Data is already CF_compliant\\\")\";\n var nbb_cells = Jupyter.notebook.get_cells();\n for (var i = 0; i < nbb_cells.length; ++i) {\n if (nbb_cells[i].input_prompt_number == nbb_cell_id) {\n if (nbb_cells[i].get_text() == nbb_unformatted_code) {\n nbb_cells[i].set_text(nbb_formatted_code);\n }\n break;\n }\n }\n }, 500);\n ", - "text/plain": [ - "" - ] - }, - "metadata": {}, - "output_type": "display_data" } ], "source": [ @@ -143,20 +139,9 @@ }, { "cell_type": "code", - "execution_count": 53, + "execution_count": 3, "metadata": {}, - "outputs": [ - { - "data": { - "application/javascript": "\n setTimeout(function() {\n var nbb_cell_id = 53;\n var nbb_unformatted_code = \"# Set up file structure for coastal flooding hazard maps\\n\\nimport glob\\nimport rioxarray\\nimport rasterio\\nfrom datacube.utils.cog import write_cog\\n\\ndef generate_slices(num_chunks: int, chunk_size: int) -> Tuple[slice, slice]:\\n \\\"\\\"\\\"Generate slices for chunk-based iteration.\\\"\\\"\\\"\\n for i in range(num_chunks):\\n yield slice(i * chunk_size, (i + 1) * chunk_size)\\n\\ndef get_paths(folder_structure, base_dir=''):\\n \\\"\\\"\\\"Generate paths for a folder structure defined by a dict\\\"\\\"\\\"\\n paths = []\\n for key, value in folder_structure.items():\\n if isinstance(value, dict):\\n paths.extend(get_paths(value, os.path.join(base_dir, key)))\\n elif isinstance(value, list):\\n if value:\\n for item in value:\\n if item != \\\"\\\":\\n paths.append(os.path.join(base_dir, key, item))\\n else:\\n paths.append(os.path.join(base_dir, key))\\n else:\\n continue\\n return paths\\n\\n# List different types on map folders\\nmap_types = [ 'HIGH_DEFENDED_MAPS',\\n 'LOW_DEFENDED_MAPS',\\n 'UNDEFENDED_MAPS']\\n\\n# List all tif files present in first folder (note: it is assumed that the same files are present in all folders)\\ntif_list = glob.glob(str(ds_dir.joinpath(\\\"data\\\", map_types[0],\\\"*.tif\\\")))\\n\\n# List the desired folder structure as a dict\\n# NOTE: make sure the resulting path_list (based on folder structure) matches the tif_list\\nfolder_structure = {\\n \\\"Mean_spring_tide\\\": [],\\n \\\"RP\\\": [\\\"1000\\\", \\\"100\\\", \\\"1\\\"],\\n \\\"SLR\\\": {\\n \\\"High_end\\\": [\\\"2100\\\", \\\"2150\\\"],\\n \\\"SSP126\\\": [\\\"2100\\\"],\\n \\\"SSP245\\\": [\\\"2050\\\", \\\"2100\\\"],\\n \\\"SSP585\\\": [\\\"2030\\\", \\\"2050\\\", \\\"2100\\\"]\\n }\\n}\\n\\n# Get list of paths for the folder structure\\npath_list = get_paths(folder_structure)\";\n var nbb_formatted_code = \"# Set up file structure for coastal flooding hazard maps\\n\\nimport glob\\nimport rioxarray\\nimport rasterio\\nfrom datacube.utils.cog import write_cog\\n\\n\\ndef generate_slices(num_chunks: int, chunk_size: int) -> Tuple[slice, slice]:\\n \\\"\\\"\\\"Generate slices for chunk-based iteration.\\\"\\\"\\\"\\n for i in range(num_chunks):\\n yield slice(i * chunk_size, (i + 1) * chunk_size)\\n\\n\\ndef get_paths(folder_structure, base_dir=\\\"\\\"):\\n \\\"\\\"\\\"Generate paths for a folder structure defined by a dict\\\"\\\"\\\"\\n paths = []\\n for key, value in folder_structure.items():\\n if isinstance(value, dict):\\n paths.extend(get_paths(value, os.path.join(base_dir, key)))\\n elif isinstance(value, list):\\n if value:\\n for item in value:\\n if item != \\\"\\\":\\n paths.append(os.path.join(base_dir, key, item))\\n else:\\n paths.append(os.path.join(base_dir, key))\\n else:\\n continue\\n return paths\\n\\n\\n# List different types on map folders\\nmap_types = [\\\"HIGH_DEFENDED_MAPS\\\", \\\"LOW_DEFENDED_MAPS\\\", \\\"UNDEFENDED_MAPS\\\"]\\n\\n# List all tif files present in first folder (note: it is assumed that the same files are present in all folders)\\ntif_list = glob.glob(str(ds_dir.joinpath(\\\"data\\\", map_types[0], \\\"*.tif\\\")))\\n\\n# List the desired folder structure as a dict\\n# NOTE: make sure the resulting path_list (based on folder structure) matches the tif_list\\nfolder_structure = {\\n \\\"Mean_spring_tide\\\": [],\\n \\\"RP\\\": [\\\"1000\\\", \\\"100\\\", \\\"1\\\"],\\n \\\"SLR\\\": {\\n \\\"High_end\\\": [\\\"2100\\\", \\\"2150\\\"],\\n \\\"SSP126\\\": [\\\"2100\\\"],\\n \\\"SSP245\\\": [\\\"2050\\\", \\\"2100\\\"],\\n \\\"SSP585\\\": [\\\"2030\\\", \\\"2050\\\", \\\"2100\\\"],\\n },\\n}\\n\\n# Get list of paths for the folder structure\\npath_list = get_paths(folder_structure)\";\n var nbb_cells = Jupyter.notebook.get_cells();\n for (var i = 0; i < nbb_cells.length; ++i) {\n if (nbb_cells[i].input_prompt_number == nbb_cell_id) {\n if (nbb_cells[i].get_text() == nbb_unformatted_code) {\n nbb_cells[i].set_text(nbb_formatted_code);\n }\n break;\n }\n }\n }, 500);\n ", - "text/plain": [ - "" - ] - }, - "metadata": {}, - "output_type": "display_data" - } - ], + "outputs": [], "source": [ "# Set up file structure for coastal flooding hazard maps\n", "\n", @@ -215,7 +200,7 @@ }, { "cell_type": "code", - "execution_count": 54, + "execution_count": 4, "metadata": {}, "outputs": [ { @@ -260,16 +245,6 @@ "trying to open: SLR_SSP585_2100_subs_2050.json\n", "All .json files are working\n" ] - }, - { - "data": { - "application/javascript": "\n setTimeout(function() {\n var nbb_cell_id = 54;\n var nbb_unformatted_code = \"# NOTE: Not all meta_data.json files were correct and will break the loop. \\n# CHECK if all meta_data \\n\\nfor map_type in map_types:\\n\\n # Get list of original tif's per map_type\\n tif_list = glob.glob(str(ds_dir.joinpath(\\\"data\\\", map_type,\\\"*.tif\\\")))\\n \\n for cur_path, cur_tif in zip(path_list, tif_list):\\n \\n print('trying to open: ' + str(os.path.basename(cur_tif.replace('tif','json'))))\\n \\n # Load meta data\\n cur_meta_data = open(os.path.join(os.path.dirname(cur_tif),'Metadata',os.path.basename(cur_tif.replace('tif','json'))))\\n cur_meta = json.load(cur_meta_data)\\n\\n if map_type == map_types[-1] and cur_tif == tif_list[-1]:\\n print('All .json files are working')\";\n var nbb_formatted_code = \"# NOTE: Not all meta_data.json files were correct and will break the loop.\\n# CHECK if all meta_data\\n\\nfor map_type in map_types:\\n # Get list of original tif's per map_type\\n tif_list = glob.glob(str(ds_dir.joinpath(\\\"data\\\", map_type, \\\"*.tif\\\")))\\n\\n for cur_path, cur_tif in zip(path_list, tif_list):\\n print(\\n \\\"trying to open: \\\" + str(os.path.basename(cur_tif.replace(\\\"tif\\\", \\\"json\\\")))\\n )\\n\\n # Load meta data\\n cur_meta_data = open(\\n os.path.join(\\n os.path.dirname(cur_tif),\\n \\\"Metadata\\\",\\n os.path.basename(cur_tif.replace(\\\"tif\\\", \\\"json\\\")),\\n )\\n )\\n cur_meta = json.load(cur_meta_data)\\n\\n if map_type == map_types[-1] and cur_tif == tif_list[-1]:\\n print(\\\"All .json files are working\\\")\";\n var nbb_cells = Jupyter.notebook.get_cells();\n for (var i = 0; i < nbb_cells.length; ++i) {\n if (nbb_cells[i].input_prompt_number == nbb_cell_id) {\n if (nbb_cells[i].get_text() == nbb_unformatted_code) {\n nbb_cells[i].set_text(nbb_formatted_code);\n }\n break;\n }\n }\n }, 500);\n ", - "text/plain": [ - "" - ] - }, - "metadata": {}, - "output_type": "display_data" } ], "source": [ @@ -295,552 +270,63 @@ }, { "cell_type": "code", - "execution_count": 17, + "execution_count": 32, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ - "currently working on: Mean_spring_tide P:\\11207608-coclico\\FULLTRACK_DATA\\WP4\\data\\UNDEFENDED_MAPS\\High_tide.tif\n", - "B01_epsg=3035_x=1547762_y=4596737.tif\n", - "B01_epsg=3035_x=1547762_y=3777537.tif\n", - "B01_epsg=3035_x=1547762_y=2958337.tif\n", - "B01_epsg=3035_x=1547762_y=2139137.tif\n", - "B01_epsg=3035_x=1547762_y=1319937.tif\n", - "B01_epsg=3035_x=1547762_y=941637.tif\n", - "B01_epsg=3035_x=2366962_y=4596737.tif\n", - "B01_epsg=3035_x=2366962_y=3777537.tif\n", - "B01_epsg=3035_x=2366962_y=2958337.tif\n", - "B01_epsg=3035_x=2366962_y=2139137.tif\n", - "B01_epsg=3035_x=2366962_y=1319937.tif\n", - "B01_epsg=3035_x=2366962_y=941637.tif\n", - "B01_epsg=3035_x=3186162_y=4596737.tif\n", - "B01_epsg=3035_x=3186162_y=3777537.tif\n", - "B01_epsg=3035_x=3186162_y=2958337.tif\n", - "B01_epsg=3035_x=3186162_y=2139137.tif\n", - "B01_epsg=3035_x=3186162_y=1319937.tif\n", - "B01_epsg=3035_x=3186162_y=941637.tif\n", - "B01_epsg=3035_x=4005362_y=4596737.tif\n", - "B01_epsg=3035_x=4005362_y=3777537.tif\n", - "B01_epsg=3035_x=4005362_y=2958337.tif\n", - "B01_epsg=3035_x=4005362_y=2139137.tif\n", - "B01_epsg=3035_x=4005362_y=1319937.tif\n", - "B01_epsg=3035_x=4005362_y=941637.tif\n", - "B01_epsg=3035_x=4824562_y=4596737.tif\n", - "B01_epsg=3035_x=4824562_y=3777537.tif\n", - "B01_epsg=3035_x=4824562_y=2958337.tif\n", - "B01_epsg=3035_x=4824562_y=2139137.tif\n", - "B01_epsg=3035_x=4824562_y=1319937.tif\n", - "B01_epsg=3035_x=4824562_y=941637.tif\n", - "B01_epsg=3035_x=5643762_y=4596737.tif\n", - "B01_epsg=3035_x=5643762_y=3777537.tif\n", - "B01_epsg=3035_x=5643762_y=2958337.tif\n", - "B01_epsg=3035_x=5643762_y=2139137.tif\n", - "B01_epsg=3035_x=5643762_y=1319937.tif\n", - "B01_epsg=3035_x=5643762_y=941637.tif\n", - "B01_epsg=3035_x=6462962_y=4596737.tif\n", - "B01_epsg=3035_x=6462962_y=3777537.tif\n", - "B01_epsg=3035_x=6462962_y=2958337.tif\n", - "B01_epsg=3035_x=6462962_y=2139137.tif\n", - "B01_epsg=3035_x=6462962_y=1319937.tif\n", - "B01_epsg=3035_x=6462962_y=941637.tif\n", - "currently working on: RP\\1000 P:\\11207608-coclico\\FULLTRACK_DATA\\WP4\\data\\UNDEFENDED_MAPS\\RP1000_UD.tif\n", - "B01_epsg=3035_x=1547762_y=4596737.tif\n", - "B01_epsg=3035_x=1547762_y=3777537.tif\n", - "B01_epsg=3035_x=1547762_y=2958337.tif\n", - "B01_epsg=3035_x=1547762_y=2139137.tif\n", - "B01_epsg=3035_x=1547762_y=1319937.tif\n", - "B01_epsg=3035_x=1547762_y=941637.tif\n", - "B01_epsg=3035_x=2366962_y=4596737.tif\n", - "B01_epsg=3035_x=2366962_y=3777537.tif\n", - "B01_epsg=3035_x=2366962_y=2958337.tif\n", - "B01_epsg=3035_x=2366962_y=2139137.tif\n", - "B01_epsg=3035_x=2366962_y=1319937.tif\n", - "B01_epsg=3035_x=2366962_y=941637.tif\n", - "B01_epsg=3035_x=3186162_y=4596737.tif\n", - "B01_epsg=3035_x=3186162_y=3777537.tif\n", - "B01_epsg=3035_x=3186162_y=2958337.tif\n", - "B01_epsg=3035_x=3186162_y=2139137.tif\n", - "B01_epsg=3035_x=3186162_y=1319937.tif\n", - "B01_epsg=3035_x=3186162_y=941637.tif\n", - "B01_epsg=3035_x=4005362_y=4596737.tif\n", - "B01_epsg=3035_x=4005362_y=3777537.tif\n", - "B01_epsg=3035_x=4005362_y=2958337.tif\n", - "B01_epsg=3035_x=4005362_y=2139137.tif\n", - "B01_epsg=3035_x=4005362_y=1319937.tif\n", - "B01_epsg=3035_x=4005362_y=941637.tif\n", - "B01_epsg=3035_x=4824562_y=4596737.tif\n", - "B01_epsg=3035_x=4824562_y=3777537.tif\n", - "B01_epsg=3035_x=4824562_y=2958337.tif\n", - "B01_epsg=3035_x=4824562_y=2139137.tif\n", - "B01_epsg=3035_x=4824562_y=1319937.tif\n", - "B01_epsg=3035_x=4824562_y=941637.tif\n", - "B01_epsg=3035_x=5643762_y=4596737.tif\n", - "B01_epsg=3035_x=5643762_y=3777537.tif\n", - "B01_epsg=3035_x=5643762_y=2958337.tif\n", - "B01_epsg=3035_x=5643762_y=2139137.tif\n", - "B01_epsg=3035_x=5643762_y=1319937.tif\n", - "B01_epsg=3035_x=5643762_y=941637.tif\n", - "B01_epsg=3035_x=6462962_y=4596737.tif\n", - "B01_epsg=3035_x=6462962_y=3777537.tif\n", - "B01_epsg=3035_x=6462962_y=2958337.tif\n", - "B01_epsg=3035_x=6462962_y=2139137.tif\n", - "B01_epsg=3035_x=6462962_y=1319937.tif\n", - "B01_epsg=3035_x=6462962_y=941637.tif\n", - "currently working on: RP\\100 P:\\11207608-coclico\\FULLTRACK_DATA\\WP4\\data\\UNDEFENDED_MAPS\\RP100_UD.tif\n", - "B01_epsg=3035_x=1547762_y=4596737.tif\n", - "B01_epsg=3035_x=1547762_y=3777537.tif\n", - "B01_epsg=3035_x=1547762_y=2958337.tif\n", - "B01_epsg=3035_x=1547762_y=2139137.tif\n", - "B01_epsg=3035_x=1547762_y=1319937.tif\n", - "B01_epsg=3035_x=1547762_y=941637.tif\n", - "B01_epsg=3035_x=2366962_y=4596737.tif\n", - "B01_epsg=3035_x=2366962_y=3777537.tif\n", - "B01_epsg=3035_x=2366962_y=2958337.tif\n", - "B01_epsg=3035_x=2366962_y=2139137.tif\n", - "B01_epsg=3035_x=2366962_y=1319937.tif\n", - "B01_epsg=3035_x=2366962_y=941637.tif\n", - "B01_epsg=3035_x=3186162_y=4596737.tif\n", - "B01_epsg=3035_x=3186162_y=3777537.tif\n", - "B01_epsg=3035_x=3186162_y=2958337.tif\n", - "B01_epsg=3035_x=3186162_y=2139137.tif\n", - "B01_epsg=3035_x=3186162_y=1319937.tif\n", - "B01_epsg=3035_x=3186162_y=941637.tif\n", - "B01_epsg=3035_x=4005362_y=4596737.tif\n", - "B01_epsg=3035_x=4005362_y=3777537.tif\n", - "B01_epsg=3035_x=4005362_y=2958337.tif\n", - "B01_epsg=3035_x=4005362_y=2139137.tif\n", - "B01_epsg=3035_x=4005362_y=1319937.tif\n", - "B01_epsg=3035_x=4005362_y=941637.tif\n", - "B01_epsg=3035_x=4824562_y=4596737.tif\n", - "B01_epsg=3035_x=4824562_y=3777537.tif\n", - "B01_epsg=3035_x=4824562_y=2958337.tif\n", - "B01_epsg=3035_x=4824562_y=2139137.tif\n", - "B01_epsg=3035_x=4824562_y=1319937.tif\n", - "B01_epsg=3035_x=4824562_y=941637.tif\n", - "B01_epsg=3035_x=5643762_y=4596737.tif\n", - "B01_epsg=3035_x=5643762_y=3777537.tif\n", - "B01_epsg=3035_x=5643762_y=2958337.tif\n", - "B01_epsg=3035_x=5643762_y=2139137.tif\n", - "B01_epsg=3035_x=5643762_y=1319937.tif\n", - "B01_epsg=3035_x=5643762_y=941637.tif\n", - "B01_epsg=3035_x=6462962_y=4596737.tif\n", - "B01_epsg=3035_x=6462962_y=3777537.tif\n", - "B01_epsg=3035_x=6462962_y=2958337.tif\n", - "B01_epsg=3035_x=6462962_y=2139137.tif\n", - "B01_epsg=3035_x=6462962_y=1319937.tif\n", - "B01_epsg=3035_x=6462962_y=941637.tif\n", - "currently working on: RP\\1 P:\\11207608-coclico\\FULLTRACK_DATA\\WP4\\data\\UNDEFENDED_MAPS\\RP1_UD.tif\n", - "B01_epsg=3035_x=1547762_y=4596737.tif\n", - "B01_epsg=3035_x=1547762_y=3777537.tif\n", - "B01_epsg=3035_x=1547762_y=2958337.tif\n", - "B01_epsg=3035_x=1547762_y=2139137.tif\n", - "B01_epsg=3035_x=1547762_y=1319937.tif\n", - "B01_epsg=3035_x=1547762_y=941637.tif\n", - "B01_epsg=3035_x=2366962_y=4596737.tif\n", - "B01_epsg=3035_x=2366962_y=3777537.tif\n", - "B01_epsg=3035_x=2366962_y=2958337.tif\n", - "B01_epsg=3035_x=2366962_y=2139137.tif\n", - "B01_epsg=3035_x=2366962_y=1319937.tif\n", - "B01_epsg=3035_x=2366962_y=941637.tif\n", - "B01_epsg=3035_x=3186162_y=4596737.tif\n", - "B01_epsg=3035_x=3186162_y=3777537.tif\n", - "B01_epsg=3035_x=3186162_y=2958337.tif\n", - "B01_epsg=3035_x=3186162_y=2139137.tif\n", - "B01_epsg=3035_x=3186162_y=1319937.tif\n", - "B01_epsg=3035_x=3186162_y=941637.tif\n", - "B01_epsg=3035_x=4005362_y=4596737.tif\n", - "B01_epsg=3035_x=4005362_y=3777537.tif\n", - "B01_epsg=3035_x=4005362_y=2958337.tif\n", - "B01_epsg=3035_x=4005362_y=2139137.tif\n", - "B01_epsg=3035_x=4005362_y=1319937.tif\n", - "B01_epsg=3035_x=4005362_y=941637.tif\n", - "B01_epsg=3035_x=4824562_y=4596737.tif\n", - "B01_epsg=3035_x=4824562_y=3777537.tif\n", - "B01_epsg=3035_x=4824562_y=2958337.tif\n", - "B01_epsg=3035_x=4824562_y=2139137.tif\n", - "B01_epsg=3035_x=4824562_y=1319937.tif\n", - "B01_epsg=3035_x=4824562_y=941637.tif\n", - "B01_epsg=3035_x=5643762_y=4596737.tif\n", - "B01_epsg=3035_x=5643762_y=3777537.tif\n", - "B01_epsg=3035_x=5643762_y=2958337.tif\n", - "B01_epsg=3035_x=5643762_y=2139137.tif\n", - "B01_epsg=3035_x=5643762_y=1319937.tif\n", - "B01_epsg=3035_x=5643762_y=941637.tif\n", - "B01_epsg=3035_x=6462962_y=4596737.tif\n", - "B01_epsg=3035_x=6462962_y=3777537.tif\n", - "B01_epsg=3035_x=6462962_y=2958337.tif\n", - "B01_epsg=3035_x=6462962_y=2139137.tif\n", - "B01_epsg=3035_x=6462962_y=1319937.tif\n", - "B01_epsg=3035_x=6462962_y=941637.tif\n", - "currently working on: SLR\\High_end\\2100 P:\\11207608-coclico\\FULLTRACK_DATA\\WP4\\data\\UNDEFENDED_MAPS\\SLR_High-End_2100_subs_2050.tif\n", - "B01_epsg=3035_x=1547762_y=4596737.tif\n", - "B01_epsg=3035_x=1547762_y=3777537.tif\n", - "B01_epsg=3035_x=1547762_y=2958337.tif\n", - "B01_epsg=3035_x=1547762_y=2139137.tif\n", - "B01_epsg=3035_x=1547762_y=1319937.tif\n", - "B01_epsg=3035_x=1547762_y=941637.tif\n", - "B01_epsg=3035_x=2366962_y=4596737.tif\n", - "B01_epsg=3035_x=2366962_y=3777537.tif\n", - "B01_epsg=3035_x=2366962_y=2958337.tif\n", - "B01_epsg=3035_x=2366962_y=2139137.tif\n", - "B01_epsg=3035_x=2366962_y=1319937.tif\n", - "B01_epsg=3035_x=2366962_y=941637.tif\n", - "B01_epsg=3035_x=3186162_y=4596737.tif\n", - "B01_epsg=3035_x=3186162_y=3777537.tif\n", - "B01_epsg=3035_x=3186162_y=2958337.tif\n", - "B01_epsg=3035_x=3186162_y=2139137.tif\n", - "B01_epsg=3035_x=3186162_y=1319937.tif\n", - "B01_epsg=3035_x=3186162_y=941637.tif\n", - "B01_epsg=3035_x=4005362_y=4596737.tif\n", - "B01_epsg=3035_x=4005362_y=3777537.tif\n", - "B01_epsg=3035_x=4005362_y=2958337.tif\n", - "B01_epsg=3035_x=4005362_y=2139137.tif\n", - "B01_epsg=3035_x=4005362_y=1319937.tif\n", - "B01_epsg=3035_x=4005362_y=941637.tif\n", - "B01_epsg=3035_x=4824562_y=4596737.tif\n", - "B01_epsg=3035_x=4824562_y=3777537.tif\n", - "B01_epsg=3035_x=4824562_y=2958337.tif\n", - "B01_epsg=3035_x=4824562_y=2139137.tif\n", - "B01_epsg=3035_x=4824562_y=1319937.tif\n", - "B01_epsg=3035_x=4824562_y=941637.tif\n", - "B01_epsg=3035_x=5643762_y=4596737.tif\n", - "B01_epsg=3035_x=5643762_y=3777537.tif\n", - "B01_epsg=3035_x=5643762_y=2958337.tif\n", - "B01_epsg=3035_x=5643762_y=2139137.tif\n", - "B01_epsg=3035_x=5643762_y=1319937.tif\n", - "B01_epsg=3035_x=5643762_y=941637.tif\n", - "B01_epsg=3035_x=6462962_y=4596737.tif\n", - "B01_epsg=3035_x=6462962_y=3777537.tif\n", - "B01_epsg=3035_x=6462962_y=2958337.tif\n", - "B01_epsg=3035_x=6462962_y=2139137.tif\n", - "B01_epsg=3035_x=6462962_y=1319937.tif\n", - "B01_epsg=3035_x=6462962_y=941637.tif\n", - "currently working on: SLR\\High_end\\2150 P:\\11207608-coclico\\FULLTRACK_DATA\\WP4\\data\\UNDEFENDED_MAPS\\SLR_High-End_2150_subs_2050.tif\n", - "B01_epsg=3035_x=1547762_y=4596737.tif\n", - "B01_epsg=3035_x=1547762_y=3777537.tif\n", - "B01_epsg=3035_x=1547762_y=2958337.tif\n", - "B01_epsg=3035_x=1547762_y=2139137.tif\n", - "B01_epsg=3035_x=1547762_y=1319937.tif\n", - "B01_epsg=3035_x=1547762_y=941637.tif\n", - "B01_epsg=3035_x=2366962_y=4596737.tif\n", - "B01_epsg=3035_x=2366962_y=3777537.tif\n", - "B01_epsg=3035_x=2366962_y=2958337.tif\n", - "B01_epsg=3035_x=2366962_y=2139137.tif\n", - "B01_epsg=3035_x=2366962_y=1319937.tif\n", - "B01_epsg=3035_x=2366962_y=941637.tif\n", - "B01_epsg=3035_x=3186162_y=4596737.tif\n", - "B01_epsg=3035_x=3186162_y=3777537.tif\n", - "B01_epsg=3035_x=3186162_y=2958337.tif\n", - "B01_epsg=3035_x=3186162_y=2139137.tif\n", - "B01_epsg=3035_x=3186162_y=1319937.tif\n", - "B01_epsg=3035_x=3186162_y=941637.tif\n", - "B01_epsg=3035_x=4005362_y=4596737.tif\n", - "B01_epsg=3035_x=4005362_y=3777537.tif\n", - "B01_epsg=3035_x=4005362_y=2958337.tif\n", - "B01_epsg=3035_x=4005362_y=2139137.tif\n", - "B01_epsg=3035_x=4005362_y=1319937.tif\n", - "B01_epsg=3035_x=4005362_y=941637.tif\n", - "B01_epsg=3035_x=4824562_y=4596737.tif\n", - "B01_epsg=3035_x=4824562_y=3777537.tif\n", - "B01_epsg=3035_x=4824562_y=2958337.tif\n", - "B01_epsg=3035_x=4824562_y=2139137.tif\n", - "B01_epsg=3035_x=4824562_y=1319937.tif\n", - "B01_epsg=3035_x=4824562_y=941637.tif\n", - "B01_epsg=3035_x=5643762_y=4596737.tif\n", - "B01_epsg=3035_x=5643762_y=3777537.tif\n", - "B01_epsg=3035_x=5643762_y=2958337.tif\n", - "B01_epsg=3035_x=5643762_y=2139137.tif\n", - "B01_epsg=3035_x=5643762_y=1319937.tif\n", - "B01_epsg=3035_x=5643762_y=941637.tif\n", - "B01_epsg=3035_x=6462962_y=4596737.tif\n", - "B01_epsg=3035_x=6462962_y=3777537.tif\n", - "B01_epsg=3035_x=6462962_y=2958337.tif\n", - "B01_epsg=3035_x=6462962_y=2139137.tif\n", - "B01_epsg=3035_x=6462962_y=1319937.tif\n", - "B01_epsg=3035_x=6462962_y=941637.tif\n", - "currently working on: SLR\\SSP126\\2100 P:\\11207608-coclico\\FULLTRACK_DATA\\WP4\\data\\UNDEFENDED_MAPS\\SLR_SSP126_2100_subs_2050.tif\n", - "B01_epsg=3035_x=1547762_y=4596737.tif\n", - "B01_epsg=3035_x=1547762_y=3777537.tif\n", - "B01_epsg=3035_x=1547762_y=2958337.tif\n", - "B01_epsg=3035_x=1547762_y=2139137.tif\n", - "B01_epsg=3035_x=1547762_y=1319937.tif\n", - "B01_epsg=3035_x=1547762_y=941637.tif\n", - "B01_epsg=3035_x=2366962_y=4596737.tif\n", - "B01_epsg=3035_x=2366962_y=3777537.tif\n", - "B01_epsg=3035_x=2366962_y=2958337.tif\n", - "B01_epsg=3035_x=2366962_y=2139137.tif\n", - "B01_epsg=3035_x=2366962_y=1319937.tif\n", - "B01_epsg=3035_x=2366962_y=941637.tif\n", - "B01_epsg=3035_x=3186162_y=4596737.tif\n", - "B01_epsg=3035_x=3186162_y=3777537.tif\n", - "B01_epsg=3035_x=3186162_y=2958337.tif\n", - "B01_epsg=3035_x=3186162_y=2139137.tif\n", - "B01_epsg=3035_x=3186162_y=1319937.tif\n", - "B01_epsg=3035_x=3186162_y=941637.tif\n", - "B01_epsg=3035_x=4005362_y=4596737.tif\n", - "B01_epsg=3035_x=4005362_y=3777537.tif\n", - "B01_epsg=3035_x=4005362_y=2958337.tif\n", - "B01_epsg=3035_x=4005362_y=2139137.tif\n", - "B01_epsg=3035_x=4005362_y=1319937.tif\n", - "B01_epsg=3035_x=4005362_y=941637.tif\n", - "B01_epsg=3035_x=4824562_y=4596737.tif\n", - "B01_epsg=3035_x=4824562_y=3777537.tif\n", - "B01_epsg=3035_x=4824562_y=2958337.tif\n", - "B01_epsg=3035_x=4824562_y=2139137.tif\n", - "B01_epsg=3035_x=4824562_y=1319937.tif\n", - "B01_epsg=3035_x=4824562_y=941637.tif\n", - "B01_epsg=3035_x=5643762_y=4596737.tif\n", - "B01_epsg=3035_x=5643762_y=3777537.tif\n", - "B01_epsg=3035_x=5643762_y=2958337.tif\n", - "B01_epsg=3035_x=5643762_y=2139137.tif\n", - "B01_epsg=3035_x=5643762_y=1319937.tif\n", - "B01_epsg=3035_x=5643762_y=941637.tif\n", - "B01_epsg=3035_x=6462962_y=4596737.tif\n", - "B01_epsg=3035_x=6462962_y=3777537.tif\n", - "B01_epsg=3035_x=6462962_y=2958337.tif\n", - "B01_epsg=3035_x=6462962_y=2139137.tif\n", - "B01_epsg=3035_x=6462962_y=1319937.tif\n", - "B01_epsg=3035_x=6462962_y=941637.tif\n", - "currently working on: SLR\\SSP245\\2050 P:\\11207608-coclico\\FULLTRACK_DATA\\WP4\\data\\UNDEFENDED_MAPS\\SLR_SSP245_2050_subs.tif\n", - "B01_epsg=3035_x=1547762_y=4596737.tif\n", - "B01_epsg=3035_x=1547762_y=3777537.tif\n", - "B01_epsg=3035_x=1547762_y=2958337.tif\n", - "B01_epsg=3035_x=1547762_y=2139137.tif\n", - "B01_epsg=3035_x=1547762_y=1319937.tif\n", - "B01_epsg=3035_x=1547762_y=941637.tif\n", - "B01_epsg=3035_x=2366962_y=4596737.tif\n", - "B01_epsg=3035_x=2366962_y=3777537.tif\n", - "B01_epsg=3035_x=2366962_y=2958337.tif\n", - "B01_epsg=3035_x=2366962_y=2139137.tif\n", - "B01_epsg=3035_x=2366962_y=1319937.tif\n", - "B01_epsg=3035_x=2366962_y=941637.tif\n", - "B01_epsg=3035_x=3186162_y=4596737.tif\n", - "B01_epsg=3035_x=3186162_y=3777537.tif\n", - "B01_epsg=3035_x=3186162_y=2958337.tif\n", - "B01_epsg=3035_x=3186162_y=2139137.tif\n", - "B01_epsg=3035_x=3186162_y=1319937.tif\n", - "B01_epsg=3035_x=3186162_y=941637.tif\n", - "B01_epsg=3035_x=4005362_y=4596737.tif\n", - "B01_epsg=3035_x=4005362_y=3777537.tif\n", - "B01_epsg=3035_x=4005362_y=2958337.tif\n", - "B01_epsg=3035_x=4005362_y=2139137.tif\n", - "B01_epsg=3035_x=4005362_y=1319937.tif\n", - "B01_epsg=3035_x=4005362_y=941637.tif\n", - "B01_epsg=3035_x=4824562_y=4596737.tif\n", - "B01_epsg=3035_x=4824562_y=3777537.tif\n", - "B01_epsg=3035_x=4824562_y=2958337.tif\n", - "B01_epsg=3035_x=4824562_y=2139137.tif\n", - "B01_epsg=3035_x=4824562_y=1319937.tif\n", - "B01_epsg=3035_x=4824562_y=941637.tif\n", - "B01_epsg=3035_x=5643762_y=4596737.tif\n", - "B01_epsg=3035_x=5643762_y=3777537.tif\n", - "B01_epsg=3035_x=5643762_y=2958337.tif\n", - "B01_epsg=3035_x=5643762_y=2139137.tif\n", - "B01_epsg=3035_x=5643762_y=1319937.tif\n", - "B01_epsg=3035_x=5643762_y=941637.tif\n", - "B01_epsg=3035_x=6462962_y=4596737.tif\n", - "B01_epsg=3035_x=6462962_y=3777537.tif\n", - "B01_epsg=3035_x=6462962_y=2958337.tif\n", - "B01_epsg=3035_x=6462962_y=2139137.tif\n", - "B01_epsg=3035_x=6462962_y=1319937.tif\n", - "B01_epsg=3035_x=6462962_y=941637.tif\n", - "currently working on: SLR\\SSP245\\2100 P:\\11207608-coclico\\FULLTRACK_DATA\\WP4\\data\\UNDEFENDED_MAPS\\SLR_SSP245_2100_subs_2050.tif\n", - "B01_epsg=3035_x=1547762_y=4596737.tif\n", - "B01_epsg=3035_x=1547762_y=3777537.tif\n", - "B01_epsg=3035_x=1547762_y=2958337.tif\n", - "B01_epsg=3035_x=1547762_y=2139137.tif\n", - "B01_epsg=3035_x=1547762_y=1319937.tif\n", - "B01_epsg=3035_x=1547762_y=941637.tif\n", - "B01_epsg=3035_x=2366962_y=4596737.tif\n", - "B01_epsg=3035_x=2366962_y=3777537.tif\n", - "B01_epsg=3035_x=2366962_y=2958337.tif\n", - "B01_epsg=3035_x=2366962_y=2139137.tif\n", - "B01_epsg=3035_x=2366962_y=1319937.tif\n", - "B01_epsg=3035_x=2366962_y=941637.tif\n", - "B01_epsg=3035_x=3186162_y=4596737.tif\n", - "B01_epsg=3035_x=3186162_y=3777537.tif\n", - "B01_epsg=3035_x=3186162_y=2958337.tif\n", - "B01_epsg=3035_x=3186162_y=2139137.tif\n", - "B01_epsg=3035_x=3186162_y=1319937.tif\n", - "B01_epsg=3035_x=3186162_y=941637.tif\n", - "B01_epsg=3035_x=4005362_y=4596737.tif\n", - "B01_epsg=3035_x=4005362_y=3777537.tif\n", - "B01_epsg=3035_x=4005362_y=2958337.tif\n", - "B01_epsg=3035_x=4005362_y=2139137.tif\n", - "B01_epsg=3035_x=4005362_y=1319937.tif\n", - "B01_epsg=3035_x=4005362_y=941637.tif\n", - "B01_epsg=3035_x=4824562_y=4596737.tif\n", - "B01_epsg=3035_x=4824562_y=3777537.tif\n", - "B01_epsg=3035_x=4824562_y=2958337.tif\n", - "B01_epsg=3035_x=4824562_y=2139137.tif\n", - "B01_epsg=3035_x=4824562_y=1319937.tif\n", - "B01_epsg=3035_x=4824562_y=941637.tif\n", - "B01_epsg=3035_x=5643762_y=4596737.tif\n", - "B01_epsg=3035_x=5643762_y=3777537.tif\n", - "B01_epsg=3035_x=5643762_y=2958337.tif\n", - "B01_epsg=3035_x=5643762_y=2139137.tif\n", - "B01_epsg=3035_x=5643762_y=1319937.tif\n", - "B01_epsg=3035_x=5643762_y=941637.tif\n", - "B01_epsg=3035_x=6462962_y=4596737.tif\n", - "B01_epsg=3035_x=6462962_y=3777537.tif\n", - "B01_epsg=3035_x=6462962_y=2958337.tif\n", - "B01_epsg=3035_x=6462962_y=2139137.tif\n", - "B01_epsg=3035_x=6462962_y=1319937.tif\n", - "B01_epsg=3035_x=6462962_y=941637.tif\n", - "currently working on: SLR\\SSP585\\2030 P:\\11207608-coclico\\FULLTRACK_DATA\\WP4\\data\\UNDEFENDED_MAPS\\SLR_SSP585_2030_subs.tif\n", - "B01_epsg=3035_x=1547762_y=4596737.tif\n", - "B01_epsg=3035_x=1547762_y=3777537.tif\n", - "B01_epsg=3035_x=1547762_y=2958337.tif\n", - "B01_epsg=3035_x=1547762_y=2139137.tif\n", - "B01_epsg=3035_x=1547762_y=1319937.tif\n", - "B01_epsg=3035_x=1547762_y=941637.tif\n", - "B01_epsg=3035_x=2366962_y=4596737.tif\n", - "B01_epsg=3035_x=2366962_y=3777537.tif\n", - "B01_epsg=3035_x=2366962_y=2958337.tif\n", - "B01_epsg=3035_x=2366962_y=2139137.tif\n", - "B01_epsg=3035_x=2366962_y=1319937.tif\n", - "B01_epsg=3035_x=2366962_y=941637.tif\n", - "B01_epsg=3035_x=3186162_y=4596737.tif\n", - "B01_epsg=3035_x=3186162_y=3777537.tif\n", - "B01_epsg=3035_x=3186162_y=2958337.tif\n", - "B01_epsg=3035_x=3186162_y=2139137.tif\n", - "B01_epsg=3035_x=3186162_y=1319937.tif\n", - "B01_epsg=3035_x=3186162_y=941637.tif\n", - "B01_epsg=3035_x=4005362_y=4596737.tif\n", - "B01_epsg=3035_x=4005362_y=3777537.tif\n", - "B01_epsg=3035_x=4005362_y=2958337.tif\n", - "B01_epsg=3035_x=4005362_y=2139137.tif\n", - "B01_epsg=3035_x=4005362_y=1319937.tif\n", - "B01_epsg=3035_x=4005362_y=941637.tif\n", - "B01_epsg=3035_x=4824562_y=4596737.tif\n", - "B01_epsg=3035_x=4824562_y=3777537.tif\n", - "B01_epsg=3035_x=4824562_y=2958337.tif\n", - "B01_epsg=3035_x=4824562_y=2139137.tif\n", - "B01_epsg=3035_x=4824562_y=1319937.tif\n", - "B01_epsg=3035_x=4824562_y=941637.tif\n", - "B01_epsg=3035_x=5643762_y=4596737.tif\n", - "B01_epsg=3035_x=5643762_y=3777537.tif\n", - "B01_epsg=3035_x=5643762_y=2958337.tif\n", - "B01_epsg=3035_x=5643762_y=2139137.tif\n", - "B01_epsg=3035_x=5643762_y=1319937.tif\n", - "B01_epsg=3035_x=5643762_y=941637.tif\n", - "B01_epsg=3035_x=6462962_y=4596737.tif\n", - "B01_epsg=3035_x=6462962_y=3777537.tif\n", - "B01_epsg=3035_x=6462962_y=2958337.tif\n", - "B01_epsg=3035_x=6462962_y=2139137.tif\n", - "B01_epsg=3035_x=6462962_y=1319937.tif\n", - "B01_epsg=3035_x=6462962_y=941637.tif\n", - "currently working on: SLR\\SSP585\\2050 P:\\11207608-coclico\\FULLTRACK_DATA\\WP4\\data\\UNDEFENDED_MAPS\\SLR_SSP585_2050_subs.tif\n", - "B01_epsg=3035_x=1547762_y=4596737.tif\n", - "B01_epsg=3035_x=1547762_y=3777537.tif\n", - "B01_epsg=3035_x=1547762_y=2958337.tif\n", - "B01_epsg=3035_x=1547762_y=2139137.tif\n", - "B01_epsg=3035_x=1547762_y=1319937.tif\n", - "B01_epsg=3035_x=1547762_y=941637.tif\n", - "B01_epsg=3035_x=2366962_y=4596737.tif\n", - "B01_epsg=3035_x=2366962_y=3777537.tif\n", - "B01_epsg=3035_x=2366962_y=2958337.tif\n", - "B01_epsg=3035_x=2366962_y=2139137.tif\n", - "B01_epsg=3035_x=2366962_y=1319937.tif\n", - "B01_epsg=3035_x=2366962_y=941637.tif\n", - "B01_epsg=3035_x=3186162_y=4596737.tif\n", - "B01_epsg=3035_x=3186162_y=3777537.tif\n", - "B01_epsg=3035_x=3186162_y=2958337.tif\n", - "B01_epsg=3035_x=3186162_y=2139137.tif\n", - "B01_epsg=3035_x=3186162_y=1319937.tif\n", - "B01_epsg=3035_x=3186162_y=941637.tif\n", - "B01_epsg=3035_x=4005362_y=4596737.tif\n", - "B01_epsg=3035_x=4005362_y=3777537.tif\n", - "B01_epsg=3035_x=4005362_y=2958337.tif\n", - "B01_epsg=3035_x=4005362_y=2139137.tif\n", - "B01_epsg=3035_x=4005362_y=1319937.tif\n", - "B01_epsg=3035_x=4005362_y=941637.tif\n", - "B01_epsg=3035_x=4824562_y=4596737.tif\n", - "B01_epsg=3035_x=4824562_y=3777537.tif\n", - "B01_epsg=3035_x=4824562_y=2958337.tif\n", - "B01_epsg=3035_x=4824562_y=2139137.tif\n", - "B01_epsg=3035_x=4824562_y=1319937.tif\n", - "B01_epsg=3035_x=4824562_y=941637.tif\n", - "B01_epsg=3035_x=5643762_y=4596737.tif\n", - "B01_epsg=3035_x=5643762_y=3777537.tif\n", - "B01_epsg=3035_x=5643762_y=2958337.tif\n", - "B01_epsg=3035_x=5643762_y=2139137.tif\n", - "B01_epsg=3035_x=5643762_y=1319937.tif\n", - "B01_epsg=3035_x=5643762_y=941637.tif\n", - "B01_epsg=3035_x=6462962_y=4596737.tif\n", - "B01_epsg=3035_x=6462962_y=3777537.tif\n", - "B01_epsg=3035_x=6462962_y=2958337.tif\n", - "B01_epsg=3035_x=6462962_y=2139137.tif\n", - "B01_epsg=3035_x=6462962_y=1319937.tif\n", - "B01_epsg=3035_x=6462962_y=941637.tif\n", - "currently working on: SLR\\SSP585\\2100 P:\\11207608-coclico\\FULLTRACK_DATA\\WP4\\data\\UNDEFENDED_MAPS\\SLR_SSP585_2100_subs_2050.tif\n", - "B01_epsg=3035_x=1547762_y=4596737.tif\n", - "B01_epsg=3035_x=1547762_y=3777537.tif\n", - "B01_epsg=3035_x=1547762_y=2958337.tif\n", - "B01_epsg=3035_x=1547762_y=2139137.tif\n", - "B01_epsg=3035_x=1547762_y=1319937.tif\n", - "B01_epsg=3035_x=1547762_y=941637.tif\n", - "B01_epsg=3035_x=2366962_y=4596737.tif\n", - "B01_epsg=3035_x=2366962_y=3777537.tif\n", - "B01_epsg=3035_x=2366962_y=2958337.tif\n", - "B01_epsg=3035_x=2366962_y=2139137.tif\n", - "B01_epsg=3035_x=2366962_y=1319937.tif\n", - "B01_epsg=3035_x=2366962_y=941637.tif\n", - "B01_epsg=3035_x=3186162_y=4596737.tif\n", - "B01_epsg=3035_x=3186162_y=3777537.tif\n", - "B01_epsg=3035_x=3186162_y=2958337.tif\n", - "B01_epsg=3035_x=3186162_y=2139137.tif\n", - "B01_epsg=3035_x=3186162_y=1319937.tif\n", - "B01_epsg=3035_x=3186162_y=941637.tif\n", - "B01_epsg=3035_x=4005362_y=4596737.tif\n", - "B01_epsg=3035_x=4005362_y=3777537.tif\n", - "B01_epsg=3035_x=4005362_y=2958337.tif\n", - "B01_epsg=3035_x=4005362_y=2139137.tif\n", - "B01_epsg=3035_x=4005362_y=1319937.tif\n", - "B01_epsg=3035_x=4005362_y=941637.tif\n", - "B01_epsg=3035_x=4824562_y=4596737.tif\n", - "B01_epsg=3035_x=4824562_y=3777537.tif\n", - "B01_epsg=3035_x=4824562_y=2958337.tif\n", - "B01_epsg=3035_x=4824562_y=2139137.tif\n", - "B01_epsg=3035_x=4824562_y=1319937.tif\n", - "B01_epsg=3035_x=4824562_y=941637.tif\n", - "B01_epsg=3035_x=5643762_y=4596737.tif\n", - "B01_epsg=3035_x=5643762_y=3777537.tif\n", - "B01_epsg=3035_x=5643762_y=2958337.tif\n", - "B01_epsg=3035_x=5643762_y=2139137.tif\n", - "B01_epsg=3035_x=5643762_y=1319937.tif\n", - "B01_epsg=3035_x=5643762_y=941637.tif\n", - "B01_epsg=3035_x=6462962_y=4596737.tif\n", - "B01_epsg=3035_x=6462962_y=3777537.tif\n", - "B01_epsg=3035_x=6462962_y=2958337.tif\n", - "B01_epsg=3035_x=6462962_y=2139137.tif\n", - "B01_epsg=3035_x=6462962_y=1319937.tif\n", - "B01_epsg=3035_x=6462962_y=941637.tif\n" + "currently working on: RP\\1 P:\\11207608-coclico\\FULLTRACK_DATA\\WP4\\data\\HIGH_DEFENDED_MAPS\\RP1_HD.tif\n" ] }, { - "data": { - "application/javascript": "\n setTimeout(function() {\n var nbb_cell_id = 17;\n var nbb_unformatted_code = \"# DO THE WORK\\n\\n# Iterate over the original tif files\\nfor map_type in [map_types[-1]]:\\n \\n # Get list of original tif's per map_type\\n tif_list = glob.glob(str(ds_dir.joinpath(\\\"data\\\", map_type,\\\"*.tif\\\")))\\n\\n for cur_path, cur_tif in zip(path_list, tif_list):\\n\\n print('currently working on: '+str(cur_path)+' '+str(cur_tif))\\n \\n cur_dir = pathlib.Path(os.path.join(cog_dirs,map_type,cur_path))\\n cur_dir.mkdir(parents=True,exist_ok=True)\\n\\n fm = rioxarray.open_rasterio(\\n cur_tif, mask_and_scale=False\\n ) # .isel({\\\"x\\\":slice(0, 40000), \\\"y\\\":slice(0, 40000)})\\n fm = fm.assign_coords(band=(\\\"band\\\", [f\\\"B{k+1:02}\\\" for k in range(1)])) # NOTE: hard coded to 1, because one band\\n fm = fm.to_dataset(\\\"band\\\")\\n\\n # chunk size \\n chunk_size = 2**15 # 16384, which is large, but OK for int8 datatype.\\n\\n fm_chunked = fm.chunk({\\\"x\\\": chunk_size, \\\"y\\\": chunk_size})\\n\\n num_x_chunks = math.ceil(fm_chunked.dims[\\\"x\\\"] / chunk_size)\\n num_y_chunks = math.ceil(fm_chunked.dims[\\\"y\\\"] / chunk_size)\\n\\n # Load meta data\\n cur_meta_data = open(os.path.join(os.path.dirname(cur_tif),'Metadata',os.path.basename(cur_tif.replace('tif','json'))))\\n cur_meta = json.load(cur_meta_data)\\n\\n for x_slice in generate_slices(num_x_chunks, chunk_size):\\n for y_slice in generate_slices(num_y_chunks, chunk_size):\\n chunk = fm_chunked.isel(x=x_slice, y=y_slice)\\n\\n chunk = chunk.assign_coords(time=pd.Timestamp(2024, 3, 18).isoformat())\\n\\n for var in chunk:\\n\\n da = chunk[var]\\n\\n da = (\\n da.where(da != 3.3999999521443642e+38,-9999)\\n .astype(\\\"float32\\\")\\n .rio.write_nodata(-9999)\\n .rio.set_spatial_dims(x_dim=\\\"x\\\", y_dim=\\\"y\\\")\\n )\\n\\n item_name = name_block(\\n da,\\n storage_prefix=\\\"\\\",\\n name_prefix=da.name,\\n include_band=None, \\n time_dim=False,\\n x_dim=\\\"x\\\",\\n y_dim=\\\"y\\\",\\n )\\n\\n # hacky fix to get rid of the espg=None string\\n if \\\"None\\\" in item_name:\\n item_name = item_name.replace(\\\"None\\\", str(rasterio.crs.CRS(da.rio.crs).to_epsg()))\\n\\n print(item_name)\\n\\n # convert to dataset\\n dad = da.to_dataset()\\n\\n # add all attributes (again)\\n for attr_name, attr_val in cur_meta.items():\\n if attr_name == 'PROVIDERS':\\n attr_val = json.dumps(attr_val)\\n if attr_name == \\\"MEDIA_TYPE\\\": # change media type to tiff, leave the rest as is\\n attr_val = \\\"IMAGE/TIFF\\\"\\n dad.attrs[attr_name] = attr_val\\n\\n dad.attrs['Conventions'] = \\\"CF-1.8\\\"\\n\\n # make parent dir if not exists\\n\\n outpath = cur_dir.joinpath(item_name)\\n outpath.parent.mkdir(parents=True, exist_ok=True)\\n\\n # export file\\n dad.rio.to_raster(outpath, compress=\\\"DEFLATE\\\", driver=\\\"COG\\\")\\n\\n # set overwrite is false because tifs should be unique\\n # try:\\n # write_cog(da, fname=outpath, overwrite=False).compute()\\n # except OSError as e:\\n # continue\";\n var nbb_formatted_code = \"# DO THE WORK\\n\\n# Iterate over the original tif files\\nfor map_type in [map_types[-1]]:\\n # Get list of original tif's per map_type\\n tif_list = glob.glob(str(ds_dir.joinpath(\\\"data\\\", map_type, \\\"*.tif\\\")))\\n\\n for cur_path, cur_tif in zip(path_list, tif_list):\\n print(\\\"currently working on: \\\" + str(cur_path) + \\\" \\\" + str(cur_tif))\\n\\n cur_dir = pathlib.Path(os.path.join(cog_dirs, map_type, cur_path))\\n cur_dir.mkdir(parents=True, exist_ok=True)\\n\\n fm = rioxarray.open_rasterio(\\n cur_tif, mask_and_scale=False\\n ) # .isel({\\\"x\\\":slice(0, 40000), \\\"y\\\":slice(0, 40000)})\\n fm = fm.assign_coords(\\n band=(\\\"band\\\", [f\\\"B{k+1:02}\\\" for k in range(1)])\\n ) # NOTE: hard coded to 1, because one band\\n fm = fm.to_dataset(\\\"band\\\")\\n\\n # chunk size\\n chunk_size = 2**15 # 16384, which is large, but OK for int8 datatype.\\n\\n fm_chunked = fm.chunk({\\\"x\\\": chunk_size, \\\"y\\\": chunk_size})\\n\\n num_x_chunks = math.ceil(fm_chunked.dims[\\\"x\\\"] / chunk_size)\\n num_y_chunks = math.ceil(fm_chunked.dims[\\\"y\\\"] / chunk_size)\\n\\n # Load meta data\\n cur_meta_data = open(\\n os.path.join(\\n os.path.dirname(cur_tif),\\n \\\"Metadata\\\",\\n os.path.basename(cur_tif.replace(\\\"tif\\\", \\\"json\\\")),\\n )\\n )\\n cur_meta = json.load(cur_meta_data)\\n\\n for x_slice in generate_slices(num_x_chunks, chunk_size):\\n for y_slice in generate_slices(num_y_chunks, chunk_size):\\n chunk = fm_chunked.isel(x=x_slice, y=y_slice)\\n\\n chunk = chunk.assign_coords(time=pd.Timestamp(2024, 3, 18).isoformat())\\n\\n for var in chunk:\\n da = chunk[var]\\n\\n da = (\\n da.where(da != 3.3999999521443642e38, -9999)\\n .astype(\\\"float32\\\")\\n .rio.write_nodata(-9999)\\n .rio.set_spatial_dims(x_dim=\\\"x\\\", y_dim=\\\"y\\\")\\n )\\n\\n item_name = name_block(\\n da,\\n storage_prefix=\\\"\\\",\\n name_prefix=da.name,\\n include_band=None,\\n time_dim=False,\\n x_dim=\\\"x\\\",\\n y_dim=\\\"y\\\",\\n )\\n\\n # hacky fix to get rid of the espg=None string\\n if \\\"None\\\" in item_name:\\n item_name = item_name.replace(\\n \\\"None\\\", str(rasterio.crs.CRS(da.rio.crs).to_epsg())\\n )\\n\\n print(item_name)\\n\\n # convert to dataset\\n dad = da.to_dataset()\\n\\n # add all attributes (again)\\n for attr_name, attr_val in cur_meta.items():\\n if attr_name == \\\"PROVIDERS\\\":\\n attr_val = json.dumps(attr_val)\\n if (\\n attr_name == \\\"MEDIA_TYPE\\\"\\n ): # change media type to tiff, leave the rest as is\\n attr_val = \\\"IMAGE/TIFF\\\"\\n dad.attrs[attr_name] = attr_val\\n\\n dad.attrs[\\\"Conventions\\\"] = \\\"CF-1.8\\\"\\n\\n # make parent dir if not exists\\n\\n outpath = cur_dir.joinpath(item_name)\\n outpath.parent.mkdir(parents=True, exist_ok=True)\\n\\n # export file\\n dad.rio.to_raster(outpath, compress=\\\"DEFLATE\\\", driver=\\\"COG\\\")\\n\\n # set overwrite is false because tifs should be unique\\n # try:\\n # write_cog(da, fname=outpath, overwrite=False).compute()\\n # except OSError as e:\\n # continue\";\n var nbb_cells = Jupyter.notebook.get_cells();\n for (var i = 0; i < nbb_cells.length; ++i) {\n if (nbb_cells[i].input_prompt_number == nbb_cell_id) {\n if (nbb_cells[i].get_text() == nbb_unformatted_code) {\n nbb_cells[i].set_text(nbb_formatted_code);\n }\n break;\n }\n }\n }, 500);\n ", - "text/plain": [ - "" - ] - }, - "metadata": {}, - "output_type": "display_data" + "name": "stderr", + "output_type": "stream", + "text": [ + "C:\\Users\\soest\\AppData\\Local\\Temp\\ipykernel_15168\\1179034474.py:27: FutureWarning: The return type of `Dataset.dims` will be changed to return a set of dimension names in future, in order to be more consistent with `DataArray.dims`. To access a mapping from dimension names to lengths, please use `Dataset.sizes`.\n", + " num_x_chunks = math.ceil(fm_chunked.dims[\"x\"] / chunk_size)\n", + "C:\\Users\\soest\\AppData\\Local\\Temp\\ipykernel_15168\\1179034474.py:28: FutureWarning: The return type of `Dataset.dims` will be changed to return a set of dimension names in future, in order to be more consistent with `DataArray.dims`. To access a mapping from dimension names to lengths, please use `Dataset.sizes`.\n", + " num_y_chunks = math.ceil(fm_chunked.dims[\"y\"] / chunk_size)\n" + ] + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + "B01_epsg=3035_x=4023387_y=4596462.tif\n", + "B01_epsg=3035_x=4023387_y=3777262.tif\n", + "B01_epsg=3035_x=4023387_y=2958062.tif\n", + "B01_epsg=3035_x=4023387_y=2138862.tif\n", + "B01_epsg=3035_x=4023387_y=1425012.tif\n", + "B01_epsg=3035_x=4842587_y=4596462.tif\n", + "B01_epsg=3035_x=4842587_y=3777262.tif\n", + "B01_epsg=3035_x=4842587_y=2958062.tif\n", + "B01_epsg=3035_x=4842587_y=2138862.tif\n", + "B01_epsg=3035_x=4842587_y=1425012.tif\n", + "B01_epsg=3035_x=5661787_y=4596462.tif\n", + "B01_epsg=3035_x=5661787_y=3777262.tif\n", + "B01_epsg=3035_x=5661787_y=2958062.tif\n", + "B01_epsg=3035_x=5661787_y=2138862.tif\n", + "B01_epsg=3035_x=5661787_y=1425012.tif\n", + "B01_epsg=3035_x=6480987_y=4596462.tif\n", + "B01_epsg=3035_x=6480987_y=3777262.tif\n", + "B01_epsg=3035_x=6480987_y=2958062.tif\n", + "B01_epsg=3035_x=6480987_y=2138862.tif\n", + "B01_epsg=3035_x=6480987_y=1425012.tif\n" + ] } ], "source": [ "# DO THE WORK\n", "\n", "# Iterate over the original tif files\n", - "for map_type in [map_types[-1]]:\n", + "for map_type in [map_types[0]]:\n", " \n", " # Get list of original tif's per map_type\n", " tif_list = glob.glob(str(ds_dir.joinpath(\"data\", map_type,\"*.tif\")))\n", "\n", - " for cur_path, cur_tif in zip(path_list, tif_list):\n", + " for cur_path, cur_tif in zip([path_list[3]], [tif_list[3]]):\n", "\n", " print('currently working on: '+str(cur_path)+' '+str(cur_tif))\n", " \n", @@ -874,9 +360,9 @@ " for var in chunk:\n", "\n", " da = chunk[var]\n", - "\n", + " \n", " da = (\n", - " da.where(da != 3.3999999521443642e+38,-9999)\n", + " da.where(da != chunk.attrs['_FillValue'],-9999)\n", " .astype(\"float32\")\n", " .rio.write_nodata(-9999)\n", " .rio.set_spatial_dims(x_dim=\"x\", y_dim=\"y\")\n", @@ -928,45 +414,30 @@ }, { "cell_type": "code", - "execution_count": 19, + "execution_count": 31, "metadata": {}, "outputs": [ { "data": { "text/plain": [ - "['P:\\\\11207608-coclico\\\\FULLTRACK_DATA\\\\WP4\\\\data\\\\UNDEFENDED_MAPS\\\\High_tide.tif',\n", - " 'P:\\\\11207608-coclico\\\\FULLTRACK_DATA\\\\WP4\\\\data\\\\UNDEFENDED_MAPS\\\\RP1000_UD.tif',\n", - " 'P:\\\\11207608-coclico\\\\FULLTRACK_DATA\\\\WP4\\\\data\\\\UNDEFENDED_MAPS\\\\RP100_UD.tif',\n", - " 'P:\\\\11207608-coclico\\\\FULLTRACK_DATA\\\\WP4\\\\data\\\\UNDEFENDED_MAPS\\\\RP1_UD.tif',\n", - " 'P:\\\\11207608-coclico\\\\FULLTRACK_DATA\\\\WP4\\\\data\\\\UNDEFENDED_MAPS\\\\SLR_High-End_2100_subs_2050.tif',\n", - " 'P:\\\\11207608-coclico\\\\FULLTRACK_DATA\\\\WP4\\\\data\\\\UNDEFENDED_MAPS\\\\SLR_High-End_2150_subs_2050.tif',\n", - " 'P:\\\\11207608-coclico\\\\FULLTRACK_DATA\\\\WP4\\\\data\\\\UNDEFENDED_MAPS\\\\SLR_SSP126_2100_subs_2050.tif',\n", - " 'P:\\\\11207608-coclico\\\\FULLTRACK_DATA\\\\WP4\\\\data\\\\UNDEFENDED_MAPS\\\\SLR_SSP245_2050_subs.tif',\n", - " 'P:\\\\11207608-coclico\\\\FULLTRACK_DATA\\\\WP4\\\\data\\\\UNDEFENDED_MAPS\\\\SLR_SSP245_2100_subs_2050.tif',\n", - " 'P:\\\\11207608-coclico\\\\FULLTRACK_DATA\\\\WP4\\\\data\\\\UNDEFENDED_MAPS\\\\SLR_SSP585_2030_subs.tif',\n", - " 'P:\\\\11207608-coclico\\\\FULLTRACK_DATA\\\\WP4\\\\data\\\\UNDEFENDED_MAPS\\\\SLR_SSP585_2050_subs.tif',\n", - " 'P:\\\\11207608-coclico\\\\FULLTRACK_DATA\\\\WP4\\\\data\\\\UNDEFENDED_MAPS\\\\SLR_SSP585_2100_subs_2050.tif']" + "3.0" ] }, - "execution_count": 19, + "execution_count": 31, "metadata": {}, "output_type": "execute_result" - }, - { - "data": { - "application/javascript": "\n setTimeout(function() {\n var nbb_cell_id = 19;\n var nbb_unformatted_code = \"tif_list\";\n var nbb_formatted_code = \"tif_list\";\n var nbb_cells = Jupyter.notebook.get_cells();\n for (var i = 0; i < nbb_cells.length; ++i) {\n if (nbb_cells[i].input_prompt_number == nbb_cell_id) {\n if (nbb_cells[i].get_text() == nbb_unformatted_code) {\n nbb_cells[i].set_text(nbb_formatted_code);\n }\n break;\n }\n }\n }, 500);\n ", - "text/plain": [ - "" - ] - }, - "metadata": {}, - "output_type": "display_data" } ], "source": [ - "tif_list\n", - "\n" + "chunk.attrs['_FillValue']\n" ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [] } ], "metadata": { diff --git a/scripts/create_stacs/25_chfp_stacs.py b/scripts/create_stacs/25_chfp_stacs.py index 65631a45dc..77ed385737 100644 --- a/scripts/create_stacs/25_chfp_stacs.py +++ b/scripts/create_stacs/25_chfp_stacs.py @@ -32,13 +32,23 @@ # from datacube.utils.cog import write_cog from coclicodata.drive_config import p_drive -# from pystac import Catalog, CatalogType, Collection, Summaries +from pystac import Catalog, CatalogType, Collection, Summaries from coclicodata.etl.cloud_utils import load_google_credentials, dir_to_google_cloud from coclicodata.coclico_stac.io import CoCliCoStacIO from coclicodata.coclico_stac.layouts import CoCliCoCOGLayout from coclicodata.coclico_stac.extension import ( CoclicoExtension, ) # self built stac extension +from coclicodata.coclico_stac.templates import ( + extend_links, + gen_default_collection_props, + gen_default_item, + gen_default_item_props, + gen_default_summaries, + gen_mapbox_asset, + gen_zarr_asset, + get_template_collection, +) # from coastmonitor.io.cloud import ( # to_https_url, @@ -63,7 +73,7 @@ # hard-coded STAC templates CUR_CWD = pathlib.Path.cwd() -STAC_DIR = CUR_CWD.parent.parent / "current" +STAC_DIR = CUR_CWD / "current" # .parent.parent # hard-coded input params which differ per dataset METADATA = "Mean_spring_tide_HD.json" @@ -171,7 +181,7 @@ def create_collection( "Deltares", "Cloud Optimized GeoTIFF", "Natural Hazards", - "Full-Track" + "Full-Track", ] if description is None: @@ -200,6 +210,16 @@ def create_collection( media_type=pystac.MediaType.PNG, ), ) + + collection.add_asset( + "geoserver_link", + pystac.Asset( + "https://coclico.avi.deltares.nl/geoserver/gwc/service/wmts?REQUEST=GetTile&SERVICE=WMTS&VERSION=1.0.0&LAYER=cfhp:lau_nuts_cfhp&STYLE=&TILEMATRIX=EPSG:900913:{z}&TILEMATRIXSET=EPSG:900913&FORMAT=application/vnd.mapbox-vector-tile&TILECOL={x}&TILEROW={y}", + title="Geoserver Parquet link", + media_type="application/vnd.apache.parquet", + ), + ) + collection.links = links collection.keywords = keywords @@ -331,6 +351,28 @@ def create_asset( return item +def create_asset_mosaic(item, storage_prefix): + title = ( + COLLECTION_ID + + ":" + + storage_prefix.split(COLLECTION_ID + "/")[1].replace("/", "_") + ) + + # TODO: We need to generalize this `href` somewhat. + vasset = pystac.Asset( # data asset + href="https://coclico.avi.deltares.nl/geoserver/%s/wms?bbox={bbox-epsg-3857}&format=image/png&service=WMS&version=1.1.1&request=GetMap&srs=EPSG:3857&transparent=true&width=256&height=256&layers=%s" + % (COLLECTION_ID, title), + media_type="application/png", + title=title, + description="OGS WMS url", + roles=["visual"], + ) + + item.add_asset("visual", vasset) + ... + return item + + # %% # ## Function to process one data partition def process_block( @@ -375,7 +417,13 @@ def process_block( ) # item_name_dum = str(file_path).split("\\")[-1] - item_id = file_path.relative_to(base_path).as_posix() + if item_type == "single": + item_id = file_path.relative_to(base_path).as_posix() + if item_type == "mosaic": + item_id = ( + file_path.relative_to(base_path).as_posix().split("/" + name_prefix)[0] + + ".tif" + ) # item_id = item_id_dum.replace(item_name_dum, item_name) # to match with item_name item = create_item(block, item_id=item_id) @@ -399,15 +447,18 @@ def process_block( nbytes = os.path.getsize(file_path) - item = create_asset( - item, - asset_title=da.name, - asset_href=href, - nodata=da.rio.nodata.item(), # use item() as this converts np dtype to python dtype - resolution=resolution, - data_type=raster.DataType.FLOAT32, # should be same as how data is written - nbytes=nbytes, - ) + if item_type == "single": + item = create_asset( + item, + asset_title=da.name, + asset_href=href, + nodata=da.rio.nodata.item(), # use item() as this converts np dtype to python dtype + resolution=resolution, + data_type=raster.DataType.FLOAT32, # should be same as how data is written + nbytes=nbytes, + ) + if item_type == "mosaic": + item = create_asset_mosaic(item, storage_prefix=storage_prefix) return item @@ -444,99 +495,221 @@ def get_paths(folder_structure, base_dir=""): ## Setup folder structure # List different types on map folders - map_types = ["HIGH_DEFENDED_MAPS", "LOW_DEFENDED_MAPS", "UNDEFENDED_MAPS"] + item_type = "mosaic" # "single" or "mosaic" + item_properties = ["defense level", "rp", "scenarios", "time"] + map_types = [ + "HIGH_DEFENDED_MAPS", + "LOW_DEFENDED_MAPS", + "UNDEFENDED_MAPS", + ] # 3 options + rps = ["static", "1", "100", "1000"] # 4 options + scenarios = ["none", "SSP126", "SSP245", "SSP585", "High_end"] # 5 options + times = ["2010", "2030", "2050", "2100", "2150"] # 5 options # List all tif files present in first folder (note: it is assumed that the same files are present in all folders) - tif_list = glob.glob(str(ds_dir.joinpath("data", map_types[0], "*.tif"))) - - # List the desired folder structure as a dict - # NOTE: make sure the resulting path_list (based on folder structure) matches the tif_list - folder_structure = { - "Mean_spring_tide": [], - "RP": ["1000", "100", "1"], - "SLR": { - "High_end": ["2100", "2150"], - "SSP126": ["2100"], - "SSP245": ["2050", "2100"], - "SSP585": ["2030", "2050", "2100"], - }, - } - - # Get list of paths for the folder structure - path_list = get_paths(folder_structure) + # tif_list = glob.glob(str(ds_dir.joinpath("data", map_types[0], "*.tif"))) + + # # List the desired folder structure as a dict + # # NOTE: make sure the resulting path_list (based on folder structure) matches the tif_list + # folder_structure = { + # "Mean_spring_tide": [], + # "RP": ["1000", "100", "1"], + # "SLR": { + # "High_end": ["2100", "2150"], + # "SSP126": ["2100"], + # "SSP245": ["2050", "2100"], + # "SSP585": ["2030", "2050", "2100"], + # }, + # } + + # # Get list of paths for the folder structure + # path_list = get_paths(folder_structure) items = [] + dimcombs = [] collection = create_collection() + # for map_type in map_types: + # for cur_path in path_list: + + # print("now working on: " + map_type + " " + cur_path) + + # tif_list = pathlib.Path.joinpath(cog_dirs, map_type, cur_path).glob("*.tif") + + # for cur_tif in tif_list: + + # cfhp = xr.open_dataset( + # cur_tif, engine="rasterio", mask_and_scale=False + # ) # .isel({"x":slice(0, 40000), "y":slice(0, 40000)}) + # cfhp = cfhp.assign_coords( + # band=("band", [f"B{k+1:02}" for k in range(cfhp.dims["band"])]) + # ) + # cfhp = cfhp["band_data"].to_dataset("band") + + # profile_options = { + # "driver": "COG", + # "dtype": "float32", + # "compress": "DEFLATE", + # # "interleave": "band", + # # "ZLEVEL": 9, + # # "predictor": 1, + # } + # storage_options = {"token": "google_default"} + + # CUR_HREF_PREFIX = urljoin(HREF_PREFIX, map_type, cur_path) + + # # Process the chunk using a delayed function + # item = process_block( + # cur_tif, + # cog_dirs, + # resolution=30, + # data_type=raster.DataType.FLOAT32, + # storage_prefix=CUR_HREF_PREFIX, + # name_prefix="B01", + # include_band="", + # time_dim=False, + # x_dim="x", + # y_dim="y", + # profile_options=profile_options, + # storage_options=storage_options, + # ) + + # item_href = pathlib.Path( + # STAC_DIR, COLLECTION_ID, "items", map_type, cur_path, item.id + # ) + # item_href.with_suffix(".json") + # item.set_self_href(item_href) + + # items.append(item) + # collection.add_item(item) + for map_type in map_types: - for cur_path in path_list: - - print("now working on: " + map_type + " " + cur_path) - - tif_list = pathlib.Path.joinpath(cog_dirs, map_type, cur_path).glob("*.tif") - - for cur_tif in tif_list: - - cfhp = xr.open_dataset( - cur_tif, engine="rasterio", mask_and_scale=False - ) # .isel({"x":slice(0, 40000), "y":slice(0, 40000)}) - cfhp = cfhp.assign_coords( - band=("band", [f"B{k+1:02}" for k in range(cfhp.dims["band"])]) - ) - cfhp = cfhp["band_data"].to_dataset("band") - - profile_options = { - "driver": "COG", - "dtype": "float32", - "compress": "DEFLATE", - # "interleave": "band", - # "ZLEVEL": 9, - # "predictor": 1, - } - storage_options = {"token": "google_default"} - - CUR_HREF_PREFIX = urljoin(HREF_PREFIX, map_type, cur_path) - - # Process the chunk using a delayed function - item = process_block( - cur_tif, - cog_dirs, - resolution=30, - data_type=raster.DataType.FLOAT32, - storage_prefix=CUR_HREF_PREFIX, - name_prefix="B01", - include_band="", - time_dim=False, - x_dim="x", - y_dim="y", - profile_options=profile_options, - storage_options=storage_options, - ) - - item_href = pathlib.Path( - STAC_DIR, COLLECTION_ID, "items", map_type, cur_path, item.id - ) - item_href.with_suffix(".json") - item.set_self_href(item_href) - - items.append(item) - collection.add_item(item) + for rp in rps: + for scen in scenarios: + for time in times: + if ( + rp == "static" and scen == "none" and time == "2010" + ): # mean spring tide + tif_list = list( + pathlib.Path.joinpath( + cog_dirs, map_type, "Mean_spring_tide" + ).glob("*.tif") + ) + cur_path = "Mean_spring_tide" + STAC_DIR.joinpath(COLLECTION_ID, "items", map_type).mkdir( + parents=True, exist_ok=True + ) + filename = os.path.join(map_type, "Mean_spring_tide") + print(map_type, rp, scen, time) + elif ( + rp != "static" and scen == "none" and time == "2010" + ): # RPs frist batchs only for 2010 (hindcast) + tif_list = list( + pathlib.Path.joinpath(cog_dirs, map_type, "RP", rp).glob( + "*.tif" + ) + ) + cur_path = os.path.join("RP", rp) + STAC_DIR.joinpath(COLLECTION_ID, "items", map_type, "RP").mkdir( + parents=True, exist_ok=True + ) + filename = os.path.join(map_type, "RP", rp) + print(map_type, rp, scen, time) + elif rp == "static" and scen != "none": # this is for the SLR maps + tif_list = list( + pathlib.Path.joinpath( + cog_dirs, map_type, "SLR", scen, time + ).glob("*.tif") + ) + cur_path = os.path.join("SLR", scen, time) + if ( + len(tif_list) > 0 + ): # we have data so we continue (so not for all times) + STAC_DIR.joinpath( + COLLECTION_ID, "items", map_type, "SLR", scen + ).mkdir(parents=True, exist_ok=True) + filename = os.path.join(map_type, "SLR", scen, time) + print(map_type, rp, scen, time) + else: # break loop if not satisfied + continue + else: # break loop if not satisfied (so not for all other combinations) + continue + + # print(len(tif_list)) + + # note, Here it changes because we are dealing with mosaics iso single tiffs. We will use a single tiff to create one item to direct to the mosaic + cfhp = xr.open_dataset( + tif_list[0], engine="rasterio", mask_and_scale=False + ) # .isel({"x":slice(0, 40000), "y":slice(0, 40000)}) + cfhp = cfhp.assign_coords( + band=("band", [f"B{k+1:02}" for k in range(cfhp.dims["band"])]) + ) + cfhp = cfhp["band_data"].to_dataset("band") + + profile_options = { + "driver": "COG", + "dtype": "float32", + "compress": "DEFLATE", + # "interleave": "band", + # "ZLEVEL": 9, + # "predictor": 1, + } + storage_options = {"token": "google_default"} + + CUR_HREF_PREFIX = urljoin(HREF_PREFIX, map_type, cur_path) + + # Process the chunk using a delayed function + item = process_block( + tif_list[0], + cog_dirs, + resolution=30, + data_type=raster.DataType.FLOAT32, + storage_prefix=CUR_HREF_PREFIX, + name_prefix="B01", + include_band="", + time_dim=False, + x_dim="x", + y_dim="y", + profile_options=profile_options, + storage_options=storage_options, + ) + + item_href = pathlib.Path(STAC_DIR, COLLECTION_ID, "items", cur_path) + item.set_self_href(item_href.with_suffix(".json")) + item.id = filename + ".tif" + + # TODO: generalize this + dimcomb = { + item_properties[0]: map_type, + item_properties[1]: rp, + item_properties[2]: scen, + item_properties[3]: time, + } + dimcombs.append(dimcomb) + + # TODO: include this in our datacube? + # add dimension key-value pairs to stac item properties dict + for k, v in dimcomb.items(): + item.properties[k] = v + + items.append(item) + collection.add_item(item) print(len(items)) # %% store to cloud folder # # upload directory with cogs to google cloud - load_google_credentials(google_token_fp=google_cred_dir) - - dir_to_google_cloud( - dir_path=str(cog_dirs), - gcs_project=GCS_PROJECT, - bucket_name=BUCKET_NAME, - bucket_proj=BUCKET_PROJ, - dir_name=PROJ_NAME, - ) + # load_google_credentials(google_token_fp=google_cred_dir) + + # dir_to_google_cloud( + # dir_path=str(cog_dirs), + # gcs_project=GCS_PROJECT, + # bucket_name=BUCKET_NAME, + # bucket_proj=BUCKET_PROJ, + # dir_name=PROJ_NAME, + # ) # %% stac_io = DefaultStacIO() @@ -544,14 +717,31 @@ def get_paths(folder_structure, base_dir=""): layout = CoCliCoCOGLayout() # Set up folder structure - for map_type in map_types: - for cur_path in path_list: - STAC_DIR.joinpath(COLLECTION_ID, "items", map_type, cur_path).mkdir( - parents=True, exist_ok=True - ) + # for map_type in map_types: + # for cur_path in path_list: + # STAC_DIR.joinpath(COLLECTION_ID, "items", map_type, cur_path).mkdir( + # parents=True, exist_ok=True + # ) collection.update_extent_from_items() + collection.summaries = Summaries({}) + # TODO: check if maxcount is required (inpsired on xstac library) + # stac_obj.summaries.maxcount = 50 + dimvals = {} + for d in dimcombs: + for key, value in d.items(): + if key not in dimvals: + dimvals[key] = [] + if value not in dimvals[key]: + dimvals[key].append(value) + + for k, v in dimvals.items(): + collection.summaries.add(k, v) + + # set extra link properties + extend_links(collection, dimvals.keys()) + catalog = pystac.Catalog.from_file(str(STAC_DIR / "catalog.json")) if catalog.get_child(collection.id): diff --git a/scripts/utils/stac_to_cloud.py b/scripts/utils/stac_to_cloud.py index 1f0e291d7c..34f2cf4585 100644 --- a/scripts/utils/stac_to_cloud.py +++ b/scripts/utils/stac_to_cloud.py @@ -16,7 +16,7 @@ GCS_PROJECT = "coclico-11207608-002" BUCKET_NAME = "coclico-data-public" BUCKET_PROJ = "coclico" - STAC_NAME = "coclico-stac-NUTS2" #NOTE: if working from main STAC_NAME = 'coclico-stac', if working from branch STAC_NAME = coclico-stac-*** + STAC_NAME = "coclico-stac-cfhp" #NOTE: if working from main STAC_NAME = 'coclico-stac', if working from branch STAC_NAME = coclico-stac-*** IN_DIRNAME = "current" # hard-coded input params at project level