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Tutorial revision #2218

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3 tasks done
farid-zare opened this issue Jan 25, 2024 · 0 comments
Open
3 tasks done

Tutorial revision #2218

farid-zare opened this issue Jan 25, 2024 · 0 comments

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@farid-zare
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In this tutorial https://opencobra.github.io/cobratoolbox/stable/tutorials/tutorialCOBRA_primer_2.html
Function "deleteModelRxn" is depreciated and replaced with "removeRxn", so the tutorial should be reviewed.
On a separate note, we are currently using "deleteModelGenes" for gene deletion and "removeRxns" for reaction deletion, it might be helpful to follow the same protocol for naming functions with similar functionality.

I hereby confirm that I have:

  • Tried to solve the issue on my own
  • Retried to run my code with the latest version of The COBRA Toolbox
  • Checked that a similar issue has not already been opened
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