From 6c30115eac628c5ad4ffa5fc8cedd263c0fc1db7 Mon Sep 17 00:00:00 2001 From: imedina Date: Thu, 10 Oct 2024 14:06:18 +0100 Subject: [PATCH] ext-tools: add python3-pip --- opencga-app/app/cloud/docker/opencga-ext-tools/Dockerfile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/opencga-app/app/cloud/docker/opencga-ext-tools/Dockerfile b/opencga-app/app/cloud/docker/opencga-ext-tools/Dockerfile index c7cfcd9b69..57eefe8d2b 100644 --- a/opencga-app/app/cloud/docker/opencga-ext-tools/Dockerfile +++ b/opencga-app/app/cloud/docker/opencga-ext-tools/Dockerfile @@ -12,7 +12,7 @@ RUN apt-get update -y && \ ## 1. Install system dependencies DEBIAN_FRONTEND="noninteractive" TZ="Europe/London" apt-get install -y libcurl4 git libgmp-dev libcurl4-openssl-dev libgit2-dev build-essential \ libssl-dev libssh-dev libxml2-dev libfontconfig1-dev libharfbuzz-dev libfribidi-dev libfreetype6-dev libpng-dev libtiff5-dev libjpeg-dev \ - gnuplot pandoc samtools bcftools tabix fastqc plink1.9 bwa r-base wget libopenblas0-openmp libcholmod3 libsuitesparse-dev && \ + gnuplot pandoc samtools bcftools tabix fastqc plink1.9 bwa r-base wget libopenblas0-openmp libcholmod3 libsuitesparse-dev python3 python3-pip && \ apt-get remove libopenblas0-pthread && \ pip3 install pydantic && \