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NADH-ubiquinone oxidoreductase chain 1

Wikipedia

Uniprot: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

FASTA of amino acid sequence

>sp|P03886|NU1M_HUMAN NADH-ubiquinone oxidoreductase chain 1 OS=Homo sapiens OX=9606 GN=MT-ND1 PE=1 SV=1
MPMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEP
LKPATSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFILATSSLAVYSILWSG
WASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLSTLITTQEHLWLLLPSWP
LAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPFALFFMAEYTNIIMMNTLTTT
IFLGTTYDALSPELYTTYFVTKTLLLTSLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLAL
LMWYVSMPITISSIPPQT

>sp|Q9T9W3|NU1M_PANTR NADH-ubiquinone oxidoreductase chain 1 OS=Pan troglodytes OX=9598 GN=MT-ND1 PE=3 SV=2
MPMTNLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEP
LKPSTSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFILATSSLAVYSILWSG
WASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMSGSFNLSTLVTTQEHLWLILPTWP
LAMMWFISTLAETNRTPFDLTEGESELVSGFNIEYAAGPFALFFMAEYMNIIMMNTLTAT
IFLGATYNTHSPELYTTYFVTKALLLTSLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLAS
LMWYISMPTTISSIPPQT

>NP_008199.1 NADH dehydrogenase subunit 1, partial (mitochondrion) [Pan paniscus]
TPMTNLLLLIVPVLIAMAFLMLTERKILGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSTITL
YITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFILATSSLAVYSILWSGWASNSNYALIGALRAVAQTI
SYEVTLAIILLSTLLMSGSFNLSTLITTQEHLWLILPTWPLAMMWFISTLAETNRTPFDLTEGESELVSG
FNIEYAAGPFALFFMAEYMNIIMMNTLTATIFLGTTYNTHSPELYTTYFVTKALLLTSLFLWIRTTYPRL
CYDQLMHLLWKNFLPLTLASLMWYISMPTTISSIPPQT


>sp|Q9T9Z0|NU1M_GORGO NADH-ubiquinone oxidoreductase chain 1 OS=Gorilla gorilla gorilla OX=9595 GN=MT-ND1 PE=3 SV=1
MSMANLLLLIVPILIAMAFLMLTERKILGYMQLRKGPNVVGPYGLLQPFADAMKLFTKEP
LKPSTSTITLYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFILATSSLAVYSILWSG
WASNSNYALIGALRAVAQTISYEVTLAIILLSTLLMNGSFNLSTLIMTQEHLWLLLPTWP
LAMMWFISTLAETNRTPFDLAEGESELVSGFNIEYAAGPLALFFMAEYMNIIMMNTLTTM
IFLGTTYNAHSPELYTVCFITKTLLLTSLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLAL
LMWYISMPTTISSIPPQT

>sp|Q9T9X9|NU1M_PONPY NADH-ubiquinone oxidoreductase chain 1 OS=Pongo pygmaeus OX=9600 GN=MT-ND1 PE=3 SV=2
MPVINLLLLTMSILIAMAFLMLTERKILGYTQLRKGPNIVGPCGLLQPFADALKLFTKEP
LKPSTSTTILYIVSPALALTIALLLWTPLPMPNPLINLNLGLLFILATSSLTVYSILWSG
WASNSNYALIGTLRAVAQTISYEITLALILLSVLLMSGSFNLSTLITTQEHSWLLLPSWP
LALMWFISTLAETNRAPFDLTEGESELVSGFNTEYAAGPFALFFMAEYTNIILMNALTAM
IFLGTTFNIHSPELHTTLFTIKTLLLTSLFLWIRSTYPRFRYDQLMHLLWKNFLPLTLAL
LMWHISMPITTSGIPPQT

Results

                                                                                                      -----0.02----
 
                                          +-------------sp_P03886_NU1M_HUMAN_NADH-ubiquinone_oxidoreductase_chain_1_OS=H
                                 +--------+
                                 |        |
                                 |        +-------------sp_Q9T9Z0_NU1M_GORGO_NADH-ubiquinone_oxidoreductase_chain_1_OS=G
 +-------------------------------+
 |                               |      +----sp_Q9T9W3_NU1M_PANTR_NADH-ubiquinone_oxidoreductase_chain_1_OS=P
 |                               |      |
 |                               +------+
 |                                      +-----tr_A0A1B1CYR8_A0A1B1CYR8_PANPA_NADH-ubiquinone_oxidoreductase_ch
 |
 |
 +------------------------------------------------------sp_Q9T9X9_NU1M_PONPY_NADH-ubiquinone_oxidoreductase_chain_1_OS=P

FASTA of reference genome sequence (from NCBI gene)

>NC_001645.1:2725-3681 Gorilla gorilla mitochondrion, complete genome
ATATCCATGGCTAACCTTCTACTCCTCATTGTACCTATCCTAATCGCCATAGCATTCCTAATGCTAACCG
AACGAAAAATTTTAGGCTATATACAACTACGTAAAGGCCCCAACGTCGTAGGCCCCTACGGGCTACTACA
ACCCTTCGCTGACGCCATAAAACTCTTCACCAAAGAGCCCCTAAAACCCTCAACATCAACCATCACCCTC
TACATCACCGCCCCAACCTTAGCTCTCACTATTGCCCTACTATTATGAACCCCCCTCCCCATACCCAACC
CCCTAGTCAATCTCAATCTAGGCCTCCTATTCATCCTAGCCACCTCTAGCCTAGCCGTTTACTCCATCCT
CTGATCAGGGTGGGCATCAAACTCAAACTACGCCTTGATCGGCGCACTACGAGCAGTAGCCCAAACAATC
TCATATGAAGTCACCCTGGCCATTATCCTACTATCAACACTACTGATGAATGGTTCCTTTAACCTCTCCA
CCCTCATCATAACACAAGAACACCTCTGACTGCTCCTACCAACATGACCCTTAGCTATAATATGATTTAT
CTCCACATTAGCAGAAACCAACCGGACCCCCTTCGACCTCGCTGAAGGAGAATCTGAACTAGTCTCAGGC
TTTAATATCGAATATGCCGCAGGCCCCCTCGCCCTATTTTTCATAGCCGAGTACATAAATATTATCATAA
TAAATACTCTCACCACTATAATTTTCCTAGGAACAACATACAATGCCCACTCCCCTGAACTCTACACAGT
ATGCTTCATCACCAAAACCCTGCTTCTAACCTCTCTATTCCTATGAATTCGAACTGCATATCCTCGATTT
CGCTACGACCAACTCATGCACCTCCTGTGAAAAAACTTCTTGCCACTCACCCTGGCACTACTCATATGAT
ATATTTCCATACCTACCACAATCTCCAGCATTCCCCCTCAAACCTAA

>NC_002083.1:2732-3687 Pongo abelii mitochondrion, complete genome
ATGCCCATAATCAACCTCCTACTCCTCATTATATCCATCCTAATCGCCATAGCATTTCTAATGCTAACCG
AACGAAAAATCCTAGGCCACACACAACTACGCAAAGGGCCCAACATTGTGGGCCCCTACGGCTTACTACA
ACCCTTTGCCGACGCCCTAAAACTATTCACCAAAGAACCCCTAAAACCCTCCACATCAACCATCACCCTT
TACATTATTTCCCCCGCCCTAGCCCTTACCATTGCCCTCCTACTATGAACCCCCCTCCCTATGCCCATCC
CCCTAATCAACCTCAACTTAGGCCTCCTATTTATCCTAGCCGCGTCAAGCCTAACCGTCTACTCCATCCT
CTGATCAGGATGAGCATCTAACTCAAACTACGCCCTAATCGGCGCATTGCGGGCGGTAGCCCAAACGATC
TCATACGAAATTACCCTAGCCCTTATCCTGTTATCAGTACTACTAATAAGCGGCTCTTTTAACCTCTCCG
CCCTCATCACAACACAAGAACACTCATGACTACTTCTACCATCATGACCTCTAGCCCTAATATGATTTAT
TTCAACACTAGCAGAAACCAACCGAGCCCCCTTCGACCTCACCGAAGGAGAATCCGAACTAGTTTCGGGC
TTTAACACTGAATACGCCGCAGGTCCATTCGCCCTATTCTTCATAGCCGAATATACAAACATTATCTTAA
TAAACGCCCTCACCACTATAATTTTCCTAGGAACAACATTCAACATCCACTCCCCAGAACTCTACACAAC
CCTCTTCACCATCAAAACCCTACTCCTAACCTCCCTATTCCTATGAATTCGATCAACATACCCCCGATTC
CGCTACGACCAACTCATGCACCTTCTATGAAAAAATTTCCTGCCACTCACCCTAGCACTACTAATATGAC
ACATCTCCGTACCCATTGCAACCTCCGGCATTCCCCCACAAACCTA

>NC_001644.1:2727-3681 Pan paniscus mitochondrion, complete genome
ACACCCATGACTAACCTCCTACTCCTCATTGTACCTGTCCTAATCGCAATAGCATTCCTAATGCTAACCG
AACGAAAAATCCTAGGCTACATACAACTACGCAAAGGCCCCAACATTGTAGGCCCCTACGGACTATTACA
GCCTTTCGCTGACGCCATAAAACTCTTCACCAAAGAACCCTTAAAACCCTCCACTTCAACTATTACCCTC
TATATTACCGCCCCAACCTTAGCCCTGACCATCGCCCTCTTACTATGAACCCCTCTCCCCATGCCCAACC
CCCTAGTCAATCTTAACTTAGGCCTCCTATTTATTCTAGCCACCTCTAGCCTAGCCGTTTACTCAATCCT
CTGATCAGGATGAGCATCAAACTCGAACTACGCCTTAATCGGTGCATTACGAGCAGTAGCCCAAACAATC
TCATACGAAGTCACTCTAGCCATTATTCTACTATCAACGCTACTAATAAGTGGCTCCTTCAATCTCTCTA
CCCTTATCACAACACAAGAACACCTCTGACTAATCCTGCCAACATGACCCTTGGCCATAATATGATTTAT
CTCTACACTAGCAGAAACCAACCGGACTCCCTTCGACCTTACTGAAGGAGAATCTGAACTAGTCTCAGGC
TTCAACATCGAATATGCCGCAGGCCCATTTGCCCTATTCTTTATAGCCGAATACATAAACATTATTATAA
TAAACACCCTCACTGCTACAATCTTCCTAGGAACAACATACAATACGCACTCCCCTGAACTCTACACGAC
ATACTTTGTCACCAAGGCTCTACTTTTAACCTCCCTGTTCCTATGAATTCGAACAACATATCCCCGACTT
TGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTCACCCTAGCATCACTCATGTGAT
ATATTTCCATACCCACTACAATCTCCAGCATCCCCCCTCAAACCT

>NC_012920.1:3307-4262 Homo sapiens mitochondrion, complete genome
ATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTCTAATCGCAATGGCATTCCTAATGCTTACCG
AACGAAAAATTCTAGGCTATATACAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTACA
ACCCTTCGCTGACGCCATAAAACTCTTCACCAAAGAGCCCCTAAAACCCGCCACATCTACCATCACCCTC
TACATCACCGCCCCGACCTTAGCTCTCACCATCGCTCTTCTACTATGAACCCCCCTCCCCATACCCAACC
CCCTGGTCAACCTCAACCTAGGCCTCCTATTTATTCTAGCCACCTCTAGCCTAGCCGTTTACTCAATCCT
CTGATCAGGGTGAGCATCAAACTCAAACTACGCCCTGATCGGCGCACTGCGAGCAGTAGCCCAAACAATC
TCATATGAAGTCACCCTAGCCATCATTCTACTATCAACATTACTAATAAGTGGCTCCTTTAACCTCTCCA
CCCTTATCACAACACAAGAACACCTCTGATTACTCCTGCCATCATGACCCTTGGCCATAATATGATTTAT
CTCCACACTAGCAGAGACCAACCGAACCCCCTTCGACCTTGCCGAAGGGGAGTCCGAACTAGTCTCAGGC
TTCAACATCGAATACGCCGCAGGCCCCTTCGCCCTATTCTTCATAGCCGAATACACAAACATTATTATAA
TAAACACCCTCACCACTACAATCTTCCTAGGAACAACATATGACGCACTCTCCCCTGAACTCTACACAAC
ATATTTTGTCACCAAGACCCTACTTCTAACCTCCCTGTTCTTATGAATTCGAACAGCATACCCCCGATTC
CGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTCACCCTAGCATTACTTATATGAT
ATGTCTCCATACCCATTACAATCTCCAGCATTCCCCCTCAAACCTA

>NC_001643.1:2725-3681 Pan troglodytes mitochondrion, complete genome
ACACCCATGACCAACCTCCTACTCCTCATTGTACCCATCCTAATCGCAATAGCATTCCTAATGCTAACCG
AACGAAAAATTCTAGGCTACATACAACTACGCAAAGGTCCCAACATTGTAGGTCCTTACGGGCTATTACA
GCCCTTCGCTGACGCCATAAAACTCTTCACTAAAGAACCCTTAAAACCCTCCACTTCAACCATTACCCTC
TACATCACCGCCCCAACCCTAGCCCTCACCATTGCCCTCTTACTATGAACCCCCCTCCCCATACCCAACC
CCCTAGTCAATCTTAACTTAGGCCTCCTATTTATTCTAGCCACCTCCAGCCTAGCCGTTTACTCAATCCT
CTGATCAGGGTGAGCATCAAACTCGAACTACGCCTTAATCGGTGCACTACGAGCAGTAGCCCAAACAATC
TCATACGAAGTCACTCTAGCCATTATCCTACTGTCAACGCTACTAATAAGTGGCTCCTTCAATCTCTCTA
CCCTTGTCACAACACAAGAGCACCTCTGACTAATCCTGCCAACATGACCCCTGGCCATAATATGATTTAT
CTCTACACTAGCAGAGACCAACCGAACTCCCTTCGACCTTACTGAAGGAGAATCTGAACTAGTCTCAGGC
TTTAATATCGAGTATGCCGCAGGCCCCTTTGCCCTATTTTTCATAGCCGAATACATAAACATTATTATAA
TAAACACCCTCACTGCTACAATCTTCCTAGGAGCAACATACAATACTCACTCCCCTGAACTCTACACGAC
ATATTTTGTCACCAAAGCTCTACTTCTAACCTCCCTGTTCCTATGAATTCGAACAGCATATCCCCGATTT
CGCTACGACCAGCTCATACACCTCCTATGAAAAAACTTCCTACCACTCACCCTAGCATCACTCATGTGAT
ATATCTCCATACCCACTACAATCTCCAGCATCCCCCCTCAAACCTAA

Results

                                                                                                ---------0.1-------
 
                             +--------------NC_001645.1_2725-3681_Gorilla_gorilla_mitochondrion_complete_gen
                             |
                             |
 +---------------------------+                  +-------NC_001644.1_2727-3681_Pan_paniscus_mitochondrion_complete_genome
 |                           |      +-----------+
 |                           |      |           +---NC_001643.1_2725-3681_Pan_troglodytes_mitochondrion_complete_gen
 |                           +------+
 |                                  |
 |                                  +----------NC_012920.1_3307-4262_Homo_sapiens_mitochondrion_complete_genome
 |
 |
 +------------------------------------------------------NC_002083.1_2732-3687_Pongo_abelii_mitochondrion_complete_genome