pyproject.toml

[build-system]
requires = [
    'setuptools>=45',
    'setuptools_scm[toml]>=6.2',
    'wheel'
]
build-backend = 'setuptools.build_meta'

[project]
name = 'skan'
dynamic = ['version']
license =  {text = 'BSD 3-Clause'}
description = 'Skeleton analysis in Python'
readme = 'README.md'
authors = [
    {name = 'Juan Nunez-Iglesias', email = 'juan.nunez-iglesias@monash.edu'}
]
classifiers = [
    'Development Status :: 3 - Alpha',
    'Environment :: Console',
    'Intended Audience :: Developers',
    'Intended Audience :: Education',
    'Intended Audience :: Science/Research',
    'License :: OSI Approved :: BSD License',
    'Programming Language :: Python',
    'Programming Language :: Python :: 3 :: Only',
    'Programming Language :: Python :: 3.8',
    'Programming Language :: Python :: 3.9',
    'Programming Language :: Python :: 3.10',
    'Topic :: Scientific/Engineering',
    'Operating System :: Microsoft :: Windows',
    'Operating System :: POSIX',
    'Operating System :: Unix',
    'Operating System :: MacOS',
    'Framework :: napari',
]
keywords = [
    'image processing',
    'skeletons'
]
requires-python = '>=3.9'
dependencies = [
    'imageio>=2.10.1',
    'magicgui>=0.7.3',
    'matplotlib>=3.4',
    'networkx>=2.7',
    'numba>=0.53',
    'numpy>=1.25',
    'pandas>=2.0.2',
    'openpyxl>=2.6',
    'scikit-image>=0.17.1',
    'scipy>=1.7',
    'toolz>=0.10.0',
    'tqdm>=4.57.0'
]

[project.optional-dependencies]
all = [
    'scikit-image[data]',
]
testing = [
    'coverage',
    'hypothesis',
    'napari[pyqt5]>=0.4.19rc1',
    'pytest',
    'pytest-cov',
    'pytest-qt',
    'seaborn<1.0',
    'tifffile',
]
docs = [
    'napari[all]>=0.4.19rc1',
    'sphinx',
    'jupyter',
    'notebook',
    'seaborn>=0.13,<1.0',
    'sphinx-toggleprompt',
    'sphinx-copybutton',
    'sphinxcontrib-bibtex',
    'myst-nb',
    'zarr',
    'pydata-sphinx-theme<1.0'
]

[project.urls]
Source = 'https://github.com/jni/skan'
Bug_Tracker = 'https://github.com/jni//issues'
Documentation = 'https://skeleton-analysis.org/stable/'

[tool.setuptools]
include-package-data = true

[tool.setuptools.packages.find]
where = ['src']
include = ['skan']
exclude = ['doc']

[tool.setuptools.package-data]
skan = [
    '*.tif',
    '*.zarr',
    '*.zip',
    '*napari.yaml'
]

[tool.setuptools_scm]
write_to = 'src/skan/_version.py'

[tool.pytest.ini_options]
minversion = "7.4.2"
addopts = "-W ignore"

[project.entry-points.'napari.manifest']
skan-napari = 'skan:napari.yaml'