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[BUG] TensorToMetrics inputs specification doesn't inherit from Mrtrix3 Base #3662

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GalKepler opened this issue Aug 1, 2024 · 0 comments · May be fixed by #3663
Open

[BUG] TensorToMetrics inputs specification doesn't inherit from Mrtrix3 Base #3662

GalKepler opened this issue Aug 1, 2024 · 0 comments · May be fixed by #3663

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@GalKepler
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Summary

The TensorMetricsInputSpec doesn't inherit from MRTrix3BaseInputSpec, making some of the basic inputs unavailable for this class.

Actual behavior

The specifications inherit from the CommandLineInputSpec.

Expected behavior

Inheritance of the base MRTrix3BaseInputSpec specification.

Platform details:

{'commit_hash': '33b1b6a3f',
 'commit_source': 'repository',
 'networkx_version': '3.3',
 'nibabel_version': '5.2.1',
 'nipype_version': '1.8.7.dev0',
 'numpy_version': '2.0.0',
 'pkg_path': '/home/galkepler/Projects/nipype/nipype',
 'scipy_version': '1.14.0',
 'sys_executable': '/home/galkepler/Projects/nipype/venv/bin/python',
 'sys_platform': 'linux',
 'sys_version': '3.11.8 | packaged by conda-forge | (main, Feb 16 2024, '
                '20:53:32) [GCC 12.3.0]',
 'traits_version': '6.3.2'}

Execution environment

  • My python environment outside container
@GalKepler GalKepler changed the title TensorToMetrics inputs specification doesn't inherit from Mrtrix3 Base [BUG] TensorToMetrics inputs specification doesn't inherit from Mrtrix3 Base Aug 1, 2024
@GalKepler GalKepler linked a pull request Aug 1, 2024 that will close this issue
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Changed inheritence of TensorMetricsInputSpec GalKepler/nipype
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@GalKepler