From 85b8027b46535a0f56b5f17c1f416026afff85f3 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?C=C3=A9line=20Provins?= Date: Thu, 20 Jun 2024 09:41:26 +0200 Subject: [PATCH 1/2] doc: add to the documentation what summary_fg means --- mriqc/qc/anatomical.py | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/mriqc/qc/anatomical.py b/mriqc/qc/anatomical.py index de5e5741..780bac37 100644 --- a/mriqc/qc/anatomical.py +++ b/mriqc/qc/anatomical.py @@ -151,7 +151,8 @@ - :py:func:`~mriqc.qc.anatomical.summary_stats` (**summary_\*_\***): Mean, median, median absolute deviation (mad), standard deviation, kurtosis, - 5% percentile, 95% percentile and number of voxels of the distribution of background, + 5% percentile, 95% percentile and number of voxels of the distribution of background (bg), + foreground (fg: corresponds to the voxels within the brain mask), :abbr:`CSF (cerebrospinal fluid)`, :abbr:`GM (gray-matter)` and :abbr:`WM (white-matter)`. .. _iqms_tpm: From 1c1bb28175a809880be1a7f0a131af7c2ccf18d5 Mon Sep 17 00:00:00 2001 From: Celine Provins Date: Tue, 30 Jul 2024 19:26:44 +0530 Subject: [PATCH 2/2] sty: ruff --- mriqc/qc/anatomical.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/mriqc/qc/anatomical.py b/mriqc/qc/anatomical.py index 780bac37..4ddb1371 100644 --- a/mriqc/qc/anatomical.py +++ b/mriqc/qc/anatomical.py @@ -151,8 +151,8 @@ - :py:func:`~mriqc.qc.anatomical.summary_stats` (**summary_\*_\***): Mean, median, median absolute deviation (mad), standard deviation, kurtosis, - 5% percentile, 95% percentile and number of voxels of the distribution of background (bg), - foreground (fg: corresponds to the voxels within the brain mask), + 5% percentile, 95% percentile and number of voxels of the distribution of background (bg), + foreground (fg: corresponds to the voxels within the brain mask), :abbr:`CSF (cerebrospinal fluid)`, :abbr:`GM (gray-matter)` and :abbr:`WM (white-matter)`. .. _iqms_tpm: