From 1bf4a21cce62c4330510a9a8ae50db876fbc23b0 Mon Sep 17 00:00:00 2001 From: oesteban Date: Thu, 24 Jan 2019 21:46:48 -0800 Subject: [PATCH] pin niworkflows-0.5.2.post7, clear cache and do not store outputs anymore --- .circleci/config.yml | 34 +++++++++++++++------------------- fmriprep/__about__.py | 2 +- requirements.txt | 2 +- 3 files changed, 17 insertions(+), 21 deletions(-) diff --git a/.circleci/config.yml b/.circleci/config.yml index 3ce64cf00..923df32da 100644 --- a/.circleci/config.yml +++ b/.circleci/config.yml @@ -21,7 +21,6 @@ jobs: - docker-v3- paths: - /tmp/cache/docker.tar.gz - - /tmp/cache/ubuntu.tar.gz - checkout - setup_remote_docker - run: @@ -359,10 +358,10 @@ jobs: at: /tmp - restore_cache: keys: - - ds005-anat-v12-{{ .Branch }}-{{ epoch }} - - ds005-anat-v12-{{ .Branch }} - - ds005-anat-v12-master - - ds005-anat-v12- + - ds005-anat-v13-{{ .Branch }}-{{ epoch }} + - ds005-anat-v13-{{ .Branch }} + - ds005-anat-v13-master + - ds005-anat-v13- - run: name: Setting up test command: | @@ -396,10 +395,9 @@ jobs: --sloppy --write-graph --mem_mb 4096 \ --nthreads 2 --anat-only -vv - save_cache: - key: ds005-anat-v12-{{ .Branch }}-{{ epoch }} + key: ds005-anat-v13-{{ .Branch }}-{{ epoch }} paths: - /tmp/ds005/work - - /tmp/ds005/derivatives/fmriprep - run: name: Run full fMRIPrep on ds005 (LegacyMultiProc plugin) @@ -490,10 +488,10 @@ jobs: at: /tmp - restore_cache: keys: - - ds054-anat-v10-{{ .Branch }}-{{ epoch }} - - ds054-anat-v10-{{ .Branch }} - - ds054-anat-v10-master - - ds054-anat-v10- + - ds054-anat-v11-{{ .Branch }}-{{ epoch }} + - ds054-anat-v11-{{ .Branch }} + - ds054-anat-v11-master + - ds054-anat-v11- - run: name: Setting up test command: | @@ -527,10 +525,9 @@ jobs: --fs-no-reconall --sloppy --write-graph \ --mem_mb 4096 --nthreads 2 --anat-only -vv - save_cache: - key: ds054-anat-v10-{{ .Branch }}-{{ epoch }} + key: ds054-anat-v11-{{ .Branch }}-{{ epoch }} paths: - /tmp/ds054/work - - /tmp/ds054/derivatives - run: name: Run full fMRIPrep on ds054 @@ -609,10 +606,10 @@ jobs: at: /tmp - restore_cache: keys: - - ds210-anat-v8-{{ .Branch }}-{{ epoch }} - - ds210-anat-v8-{{ .Branch }} - - ds210-anat-v8-master - - ds210-anat-v8- + - ds210-anat-v9-{{ .Branch }}-{{ epoch }} + - ds210-anat-v9-{{ .Branch }} + - ds210-anat-v9-master + - ds210-anat-v9- - run: name: Setting up test command: | @@ -646,10 +643,9 @@ jobs: --fs-no-reconall --sloppy --write-graph \ --mem_mb 4096 --nthreads 2 --anat-only -vv - save_cache: - key: ds210-anat-v8-{{ .Branch }}-{{ epoch }} + key: ds210-anat-v9-{{ .Branch }}-{{ epoch }} paths: - /tmp/ds210/work - - /tmp/ds210/derivatives - run: name: Run full fMRIPrep on ds000210 diff --git a/fmriprep/__about__.py b/fmriprep/__about__.py index a22b57eff..f52f6d87b 100644 --- a/fmriprep/__about__.py +++ b/fmriprep/__about__.py @@ -90,7 +90,7 @@ 'nilearn', 'nipype>=1.1.6', 'nitime', - 'niworkflows>=0.5.2.post6,<0.5.3', + 'niworkflows>=0.5.2.post7,<0.5.3', 'numpy', 'pandas', 'psutil>=5.4', diff --git a/requirements.txt b/requirements.txt index f4befac2b..f712f80f4 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,3 +1,3 @@ grabbit==0.2.3 pybids==0.6.5 -niworkflows>=0.5.2.post6,<0.5.3 +niworkflows>=0.5.2.post7,<0.5.3