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added damisseq_pipeline specific tempdir
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workflow/rules/damid.smk

+6-3
Original file line numberDiff line numberDiff line change
@@ -28,7 +28,8 @@ if config["plasmid_fasta"] == "none":
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"../envs/damid.yaml"
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threads: config["resources"]["damid"]["cpu"]
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resources:
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runtime=config["resources"]["damid"]["time"]
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runtime=config["resources"]["damid"]["time"],
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tmpdir=config["resources"]["damid"]["tmpdir"],
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log:
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"logs/damidseq_pipeline/{dir}/damidseq_pipeline.log"
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script:
@@ -96,7 +97,8 @@ else:
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"../envs/damid.yaml"
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threads: config["resources"]["damid"]["cpu"]
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resources:
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runtime=config["resources"]["damid"]["time"]
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runtime=config["resources"]["damid"]["time"],
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tmpdir=config["resources"]["damid"]["tmpdir"],
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log:
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"logs/damidseq_pipeline/{dir}/damidseq_pipeline.log"
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script:
@@ -162,7 +164,8 @@ else:
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"../envs/damid.yaml"
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threads: config["resources"]["damid"]["cpu"]
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resources:
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runtime=config["resources"]["damid"]["time"]
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runtime=config["resources"]["damid"]["time"],
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tmpdir=config["resources"]["damid"]["tmpdir"],
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log:
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"logs/damidseq_pipeline/{dir}/damidseq_pipeline.log"
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script:

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