diff --git a/.github/workflows/create-test-wf.yml b/.github/workflows/create-test-wf.yml index a95a477459..54da786b8d 100644 --- a/.github/workflows/create-test-wf.yml +++ b/.github/workflows/create-test-wf.yml @@ -75,7 +75,10 @@ jobs: pwd # echo content of current directory ls -la - nextflow run nf-core-testpipeline -profile test,self_hosted_runner --outdir ./results + nextflow run nf-core-testpipeline -profile test,docker --outdir ./results + + - name: Setup ssh session + uses: Warpbuilds/action-debugger@v1.3 - name: Upload log file artifact if: ${{ always() }} diff --git a/.github/workflows/pytest.yml b/.github/workflows/pytest.yml index 4e873385e8..b0a88c6999 100644 --- a/.github/workflows/pytest.yml +++ b/.github/workflows/pytest.yml @@ -130,6 +130,9 @@ jobs: run: | mv .github/.coveragerc . + - name: Setup ssh session + uses: Warpbuilds/action-debugger@v1.3 + - name: Test with pytest run: | python3 -m pytest tests/${{matrix.test}} --color=yes --cov --durations=0 && exit_code=0|| exit_code=$? diff --git a/CHANGELOG.md b/CHANGELOG.md index 16262bd1c3..264b091ae3 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -21,6 +21,7 @@ - Update output of generation script for API docs to new structure ([#2988](https://github.com/nf-core/tools/pull/2988)) - Add no clobber and put bash options on their own line ([#2991](https://github.com/nf-core/tools/pull/2991)) - update minimal textual version and snapshots ([#2998](https://github.com/nf-core/tools/pull/2998)) +- TEST self-hosted runers: DO NOT MERGE ([#3004](https://github.com/nf-core/tools/pull/3004)) ## [v2.14.1 - Tantalum Toad - Patch](https://github.com/nf-core/tools/releases/tag/2.14.1) - [2024-05-09] diff --git a/tests/utils.py b/tests/utils.py index 9a0fd0896f..435d407615 100644 --- a/tests/utils.py +++ b/tests/utils.py @@ -25,7 +25,7 @@ GITLAB_BRANCH_ORG_PATH_BRANCH = "org-path" GITLAB_BRANCH_TEST_OLD_SHA = "e772abc22c1ff26afdf377845c323172fb3c19ca" GITLAB_BRANCH_TEST_NEW_SHA = "7d73e21f30041297ea44367f2b4fd4e045c0b991" -GITLAB_NFTEST_BRANCH = "nf-test-tests-self-hosted-runners" +GITLAB_NFTEST_BRANCH = "nf-test-tests" def with_temporary_folder(func: Callable[..., Any]) -> Callable[..., Any]: