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fix-linting.yml
95 workflow runs
95 workflow runs

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VEP cache is not working Fix linting from a comment #113: Issue comment #126 (comment) created by nschcolnicov
February 15, 2024 13:41 2s
February 15, 2024 13:41 2s
VEP cache is not working Fix linting from a comment #112: Issue comment #126 (comment) created by maxulysse
February 15, 2024 13:29 3s
February 15, 2024 13:29 3s
Adding a filtering step to handle unplaced chromosomal sequences. V2 Fix linting from a comment #111: Issue comment #114 (comment) created by maxulysse
February 15, 2024 08:19 2s
February 15, 2024 08:19 2s
SNPEFF_SNPEEF fails due to not finding snpEffPredictor.bin file Fix linting from a comment #110: Issue comment #121 (comment) created by nschcolnicov
February 14, 2024 13:01 2s
February 14, 2024 13:01 2s
Fix linting from a comment Fix linting from a comment #109: created by nschcolnicov
February 14, 2024 13:01 2s
February 14, 2024 13:01 2s
Test full profile is not working Fix linting from a comment #108: Issue comment #123 (comment) created by maxulysse
February 12, 2024 15:00 2s
February 12, 2024 15:00 2s
Test full profile is not working Fix linting from a comment #107: Issue comment #123 (comment) created by maxulysse
February 12, 2024 10:35 2s
February 12, 2024 10:35 2s
Pipeline doesn't build the right path to the vep cache files Fix linting from a comment #106: Issue comment #122 (comment) created by maxulysse
February 12, 2024 10:20 2s
February 12, 2024 10:20 2s
Fixed S3 bucket path in conditional statements Fix linting from a comment #105: Issue comment #124 (comment) created by maxulysse
February 12, 2024 09:31 22s
February 12, 2024 09:31 22s
SNPEFF_SNPEEF fails due to not finding snpEffPredictor.bin file Fix linting from a comment #104: Issue comment #121 (comment) created by nschcolnicov
February 8, 2024 16:05 2s
February 8, 2024 16:05 2s
fix vep_cache Fix linting from a comment #103: Issue comment #106 (comment) created by nschcolnicov
February 8, 2024 14:22 2s
February 8, 2024 14:22 2s
Pipeline doesn't build the right path to the vep cache files Fix linting from a comment #102: Issue comment #122 (comment) created by bounlu
February 8, 2024 00:52 3s
February 8, 2024 00:52 3s
samplesheet check for distributed run Fix linting from a comment #101: Issue comment #42 (comment) created by ashah917
February 6, 2024 07:58 3s
February 6, 2024 07:58 3s
produce g.vcf file Fix linting from a comment #100: Issue comment #50 (comment) created by amnahsiddiqa
February 5, 2024 23:11 2s
February 5, 2024 23:11 2s
Important! Template update for nf-core/tools v2.12 Fix linting from a comment #99: Issue comment #120 (comment) created by maxulysse
February 2, 2024 08:18 2s
February 2, 2024 08:18 2s
It is possible to make "known indels" and "dbsnp" databases optional in this pipeline as was done in Sarek? Fix linting from a comment #98: Issue comment #118 (comment) created by bounlu
January 26, 2024 15:23 3s
January 26, 2024 15:23 3s
It is possible to make "known indels" and "dbsnp" databases optional in this pipeline as was done in Sarek? Fix linting from a comment #97: Issue comment #118 (comment) created by Jokendo-collab
January 26, 2024 15:18 2s
January 26, 2024 15:18 2s
It is possible to make "known indels" and "dbsnp" databases optional in this pipeline as was done in Sarek? Fix linting from a comment #96: Issue comment #118 (comment) created by bounlu
January 26, 2024 15:16 3s
January 26, 2024 15:16 3s
Added unzip feature Fix linting from a comment #95: Issue comment #116 (comment) created by maxulysse
January 24, 2024 21:42 2s
January 24, 2024 21:42 2s
Added unzip feature Fix linting from a comment #94: Issue comment #116 (comment) created by maxulysse
January 24, 2024 21:40 20s
January 24, 2024 21:40 20s
Added unzip feature Fix linting from a comment #93: Issue comment #116 (comment) created by nschcolnicov
January 24, 2024 20:43 2s
January 24, 2024 20:43 2s
Genome Version: 20201 is INCOMPATIBLE with running STAR version: 2.7.9a Fix linting from a comment #92: Issue comment #92 (comment) created by Shaun-Regenbaum
January 8, 2024 19:03 7s
January 8, 2024 19:03 7s
Adding a filtering step to handle unplaced chromosomal sequences. V2 Fix linting from a comment #91: Issue comment #114 (comment) created by maxulysse
January 8, 2024 15:27 3s
January 8, 2024 15:27 3s
Genome Version: 20201 is INCOMPATIBLE with running STAR version: 2.7.9a Fix linting from a comment #90: Issue comment #92 (comment) created by maxulysse
January 8, 2024 15:27 3s
January 8, 2024 15:27 3s
Genome Version: 20201 is INCOMPATIBLE with running STAR version: 2.7.9a Fix linting from a comment #89: Issue comment #92 (comment) created by Shaun-Regenbaum
January 1, 2024 14:10 2s
January 1, 2024 14:10 2s